RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 DSCR4P56555 118 aaPredicted RBP5.05□□□□□ -1.6
SCN1A-209ENST00000635750 FABP9Q0Z7S8 132 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 HAGHQ16775 308 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 GGTA1PQ4G0N0 100 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 ALKAL2Q6UX46 152 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 Q6ZN92 141 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 TGIF2LYQ8IUE0 185 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 CLEC18CQ8NCF0 446 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.05□□□□□ -1.6
SCN1A-209ENST00000635750 RASD2Q96D21 266 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 ZNF2Q9BSG1 426 aaPredicted RBP5.05□□□□□ -1.6
SCN1A-209ENST00000635750 MRPL22Q9NWU5 206 aaKnown RBP5.05□□□□□ -1.6
SCN1A-209ENST00000635750 CES1P1Q9UKY3 287 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 MON2Q7Z3U7 1717 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 DNAJC13O75165 2243 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 SERPINE3A8MV23 424 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 M0QYG6 137 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 TGOLN2O43493 480 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 CD3EP07766 207 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 COX6B1P14854 86 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 ZNF83P51522 516 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 LIM2P55344 173 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 ERVFC1P60507 584 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 ZNF154Q13106 437 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 BTN1A1Q13410 526 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 ASCL5Q7RTU5 278 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 TAS1R1Q7RTX1 841 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 OR5M8Q8NGP6 311 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 SLAMF6Q96DU3 332 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 DHRS4Q9BTZ2 278 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 EMC6Q9BV81 110 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 PTDSS2Q9BVG9 487 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 COA4Q9NYJ1 87 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 SLAMF8Q9P0V8 285 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 ICAM5Q9UMF0 924 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 NSG2Q9Y328 171 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 MOB4Q9Y3A3 225 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 HDGFL3Q9Y3E1 203 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 IGHV3-20A0A0C4DH32 117 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 HAX1O00165 279 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 SELENOFO60613 162 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 SLC25A5P05141 298 aaKnown RBP5.05□□□□□ -1.6
SCN1A-209ENST00000635750 IAPPP10997 89 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 MNX1P50219 401 aaPredicted RBP5.05□□□□□ -1.6
SCN1A-209ENST00000635750 CCR5P51681 352 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 SLC51BQ86UW2 128 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 ZFP62Q8NB50 900 aaPredicted RBP5.05□□□□□ -1.6
SCN1A-209ENST00000635750 GLIS1Q8NBF1 620 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 OR11G2Q8NGC1 345 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 CCL17Q92583 94 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 RDH5Q92781 318 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 ZMAT3Q9HA38 289 aaKnown RBP5.05□□□□□ -1.6
SCN1A-209ENST00000635750 HS3ST2Q9Y278 367 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 PTGESO14684 152 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 GABRB3P28472 473 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 MPGP29372 298 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 KCNJ3P48549 501 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 PITX1P78337 314 aaPredicted RBP5.05□□□□□ -1.6
SCN1A-209ENST00000635750 EGR3Q06889 387 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 C19orf57Q0VDD7 668 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 TCEAL1Q15170 157 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 GUK1Q16774 197 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 NEURL3Q96EH8 262 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 MRGPRX4Q96LA9 322 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 NUP214P35658 2090 aaPredicted RBP5.05□□□□□ -1.6
SCN1A-209ENST00000635750 N4BP2Q86UW6 1770 aaPredicted RBP5.05□□□□□ -1.6
SCN1A-209ENST00000635750 C5orf52A6NGY3 159 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 K7ESF4 209 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 NUPL2O15504 423 aaKnown RBP5.05□□□□□ -1.6
SCN1A-209ENST00000635750 FURINP09958 794 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 CPN1P15169 458 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 OR3A1P47881 315 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 GNG10P50151 68 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 GPM6AP51674 278 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 PRDX4Q13162 271 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 SLC17A1Q14916 467 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 SOWAHCQ53LP3 525 aaPredicted RBP5.05□□□□□ -1.6
SCN1A-209ENST00000635750 ZNF787Q6DD87 383 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 LRRTM3Q86VH5 581 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 OR4C5Q8NGB2 326 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 PDLIM5Q96HC4 596 aaKnown RBP5.05□□□□□ -1.6
SCN1A-209ENST00000635750 PRDM4Q9UKN5 801 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 NALCNQ8IZF0 1738 aa5.05□□□□□ -1.6
SCN1A-209ENST00000635750 SYT5O00445 386 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 AGFG2O95081 481 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 APEHP13798 732 aaKnown RBP5.04□□□□□ -1.6
SCN1A-209ENST00000635750 KIR3DL2P43630 455 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 HTR6P50406 440 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 RPUSD3Q6P087 351 aaKnown RBP5.04□□□□□ -1.6
SCN1A-209ENST00000635750 SLC48A1Q6P1K1 146 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 CCDC190Q86UF4 302 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 LHX4Q969G2 390 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 APOBEC3DQ96AK3 386 aaPredicted RBP5.04□□□□□ -1.6
SCN1A-209ENST00000635750 CLDN23Q96B33 292 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 ADAT1Q9BUB4 502 aaKnown RBP5.04□□□□□ -1.6
SCN1A-209ENST00000635750 FOXQ1Q9C009 403 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 LHX3Q9UBR4 397 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 KIAA0100Q14667 2235 aaKnown RBP5.04□□□□□ -1.6
SCN1A-209ENST00000635750 IGHV3-15A0A0B4J1V0 119 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 FAM181BA6NEQ2 426 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms