RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 NR2C2APQ86WQ0 139 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 SLC43A2Q8N370 569 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 TMEM99Q8N816 258 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 COX18Q8N8Q8 333 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 ABHD4Q8TB40 342 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 TMEM158Q8WZ71 300 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 HCAR1Q9BXC0 346 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 C1QTNF6Q9BXI9 259 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 SLC22A4Q9H015 551 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 ISG20L2Q9H9L3 353 aaKnown RBP4.23□□□□□ -1.73
LINC00550-201ENST00000629293 MEPEQ9NQ76 525 aaPredicted RBP4.23□□□□□ -1.73
LINC00550-201ENST00000629293 INPP5EQ9NRR6 644 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 SIRT4Q9Y6E7 314 aaPredicted RBP4.23□□□□□ -1.73
LINC00550-201ENST00000629293 NPIPA5A0A0B4J1W7 369 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 A0A1W2PR80 420 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 FAM183AA6NL82 134 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 NPIPA7E9PJI5 369 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 NPIPB9F8W1W9 429 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 PHF1O43189 567 aaPredicted RBP4.22□□□□□ -1.73
LINC00550-201ENST00000629293 RNF13O43567 381 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 HCRTR2O43614 444 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 CHP2O43745 196 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 SC5DO75845 299 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 UTS2O95399 124 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 GKN3PP0CG01 181 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 NPIPA8P0DM63 369 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 EVX1P49640 407 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 ZNF41P51814 821 aaPredicted RBP4.22□□□□□ -1.73
LINC00550-201ENST00000629293 PSG6Q00889 435 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 INSL4Q14641 139 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 TAB1Q15750 504 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 ABLIM2Q6H8Q1 611 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 CNIH2Q6PI25 160 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 ACBD7Q8N6N7 88 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 ZNF611Q8N823 705 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 OR52L1Q8NGH7 329 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 ZNF486Q96H40 463 aaPredicted RBP4.22□□□□□ -1.73
LINC00550-201ENST00000629293 DIRAS2Q96HU8 199 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 TMED9Q9BVK6 235 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 B3GAT2Q9NPZ5 323 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 HAO2Q9NYQ3 351 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 MEIOCA2RUB1 952 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 SMIM30A4D0T7 59 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 ZNF785A8K8V0 405 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 C12orf71A8MTZ7 269 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 HPGDSO60760 199 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 COQ9O75208 318 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 CCNKO75909 580 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 LY6HO94772 140 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 CGAP01215 116 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 GSTT2P0CG29 244 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 GSTT2BP0CG30 244 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 VSIG10L2P0DP72 767 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 IFI30P13284 250 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 CELP19835 753 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 RBM34P42696 430 aaKnown RBP4.22□□□□□ -1.73
LINC00550-201ENST00000629293 ACAA2P42765 397 aaKnown RBP4.22□□□□□ -1.73
LINC00550-201ENST00000629293 NR4A2P43354 598 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 CARD18P57730 90 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 BSPH1Q075Z2 132 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 TMEM53Q6P2H8 277 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 APOOLQ6UXV4 268 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 KLBQ86Z14 1044 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 OR51G2Q8NGK0 314 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 OR13C2Q8NGS9 318 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 PTP4A1Q93096 173 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 BPIFA2Q96DR5 249 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 RNF170Q96K19 258 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 ALG8Q9BVK2 526 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 ESRP2Q9H6T0 727 aaKnown RBP4.22□□□□□ -1.73
LINC00550-201ENST00000629293 MED20Q9H944 212 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 ADGRL4Q9HBW9 690 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 NEK6Q9HC98 313 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 BABAM2Q9NXR7 383 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 CISD1Q9NZ45 108 aaKnown RBP4.22□□□□□ -1.73
LINC00550-201ENST00000629293 ZNF221Q9UK13 617 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 BAIAP2Q9UQB8 552 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 SLC35A3Q9Y2D2 325 aa4.22□□□□□ -1.73
LINC00550-201ENST00000629293 IGHV4-30-2A0A087WSY4 118 aa4.21□□□□□ -1.73
LINC00550-201ENST00000629293 A0A0G2JK05 382 aa4.21□□□□□ -1.73
LINC00550-201ENST00000629293 TO15178 435 aa4.21□□□□□ -1.73
LINC00550-201ENST00000629293 PLPP2O43688 288 aa4.21□□□□□ -1.73
LINC00550-201ENST00000629293 NCR1O76036 304 aa4.21□□□□□ -1.73
LINC00550-201ENST00000629293 SOX30O94993 753 aa4.21□□□□□ -1.73
LINC00550-201ENST00000629293 IGKV1D-16P01601 117 aa4.21□□□□□ -1.73
LINC00550-201ENST00000629293 IGHV4-39P01824 125 aa4.21□□□□□ -1.73
LINC00550-201ENST00000629293 NGFRP08138 427 aa4.21□□□□□ -1.73
LINC00550-201ENST00000629293 IL11P20809 199 aa4.21□□□□□ -1.73
LINC00550-201ENST00000629293 NKX2-5P52952 324 aaPredicted RBP4.21□□□□□ -1.73
LINC00550-201ENST00000629293 PSMD4P55036 377 aaKnown RBP4.21□□□□□ -1.73
LINC00550-201ENST00000629293 ZNF85Q03923 595 aa4.21□□□□□ -1.73
LINC00550-201ENST00000629293 KRTAP1-1Q07627 177 aa4.21□□□□□ -1.73
LINC00550-201ENST00000629293 P2RY14Q15391 338 aa4.21□□□□□ -1.73
LINC00550-201ENST00000629293 TMEM176BQ3YBM2 270 aaPredicted RBP4.21□□□□□ -1.73
LINC00550-201ENST00000629293 PDZK1Q5T2W1 519 aa4.21□□□□□ -1.73
LINC00550-201ENST00000629293 C9orf135Q5VTT2 229 aa4.21□□□□□ -1.73
LINC00550-201ENST00000629293 RSBN1Q5VWQ0 802 aaPredicted RBP4.21□□□□□ -1.73
LINC00550-201ENST00000629293 SLC22A25Q6T423 547 aa4.21□□□□□ -1.73
LINC00550-201ENST00000629293 NUFIP2Q7Z417 695 aaKnown RBP4.21□□□□□ -1.73
LINC00550-201ENST00000629293 PXKQ7Z7A4 578 aa4.21□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms