RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 USP51Q70EK9 711 aa17.31■□□□□ 0.36
PTCD3-220ENST00000627371 FAM57BQ71RH2 274 aa17.31■□□□□ 0.36
PTCD3-220ENST00000627371 PGAP1Q75T13 922 aa17.31■□□□□ 0.36
PTCD3-220ENST00000627371 SSX6Q7RTT6 188 aa17.31■□□□□ 0.36
PTCD3-220ENST00000627371 MRPL21Q7Z2W9 205 aaKnown RBP17.31■□□□□ 0.36
PTCD3-220ENST00000627371 ZNF525Q8N782 197 aa17.31■□□□□ 0.36
PTCD3-220ENST00000627371 OR52H1Q8NGJ2 320 aa17.31■□□□□ 0.36
PTCD3-220ENST00000627371 OR2AE1Q8NHA4 323 aa17.31■□□□□ 0.36
PTCD3-220ENST00000627371 OPA3Q9H6K4 179 aa17.31■□□□□ 0.36
PTCD3-220ENST00000627371 MYOZ1Q9NP98 299 aaPredicted RBP17.31■□□□□ 0.36
PTCD3-220ENST00000627371 NKIRAS2Q9NYR9 191 aa17.31■□□□□ 0.36
PTCD3-220ENST00000627371 N6AMT1Q9Y5N5 214 aa17.31■□□□□ 0.36
PTCD3-220ENST00000627371 TANC2Q9HCD6 1990 aa17.31■□□□□ 0.36
PTCD3-220ENST00000627371 IQCF6A8MYZ5 107 aa17.3■□□□□ 0.36
PTCD3-220ENST00000627371 J3QRE1 110 aa17.3■□□□□ 0.36
PTCD3-220ENST00000627371 TBX1O43435 398 aa17.3■□□□□ 0.36
PTCD3-220ENST00000627371 ADH4P08319 380 aa17.3■□□□□ 0.36
PTCD3-220ENST00000627371 CSF3P09919 207 aa17.3■□□□□ 0.36
PTCD3-220ENST00000627371 ISL1P61371 349 aa17.3■□□□□ 0.36
PTCD3-220ENST00000627371 ACTC1P68032 377 aa17.3■□□□□ 0.36
PTCD3-220ENST00000627371 ACTA1P68133 377 aa17.3■□□□□ 0.36
PTCD3-220ENST00000627371 CLEC2AQ6UVW9 174 aa17.3■□□□□ 0.36
PTCD3-220ENST00000627371 SPSB4Q96A44 273 aa17.3■□□□□ 0.36
PTCD3-220ENST00000627371 REPIN1Q9BWE0 567 aaKnown RBP17.3■□□□□ 0.36
PTCD3-220ENST00000627371 OR10A2Q9H208 303 aa17.3■□□□□ 0.36
PTCD3-220ENST00000627371 VCX3BQ9H321 246 aa17.3■□□□□ 0.36
PTCD3-220ENST00000627371 MSL2Q9HCI7 577 aa17.3■□□□□ 0.36
PTCD3-220ENST00000627371 BRD7Q9NPI1 651 aa17.3■□□□□ 0.36
PTCD3-220ENST00000627371 EXOGQ9Y2C4 368 aaKnown RBP17.3■□□□□ 0.36
PTCD3-220ENST00000627371 HSPE1-MOB4S4R3N1 261 aa17.3■□□□□ 0.36
PTCD3-220ENST00000627371 SPRY3O43610 288 aa17.29■□□□□ 0.36
PTCD3-220ENST00000627371 IGHV1-46P01743 117 aa17.29■□□□□ 0.36
PTCD3-220ENST00000627371 MAGEB1P43366 347 aa17.29■□□□□ 0.36
PTCD3-220ENST00000627371 AQP4P55087 323 aa17.29■□□□□ 0.36
PTCD3-220ENST00000627371 PRSS12P56730 875 aa17.29■□□□□ 0.36
PTCD3-220ENST00000627371 DSCR9P59020 149 aa17.29■□□□□ 0.36
PTCD3-220ENST00000627371 TIGD6Q17RP2 521 aa17.29■□□□□ 0.36
PTCD3-220ENST00000627371 ZNF829Q3KNS6 432 aaPredicted RBP17.29■□□□□ 0.36
PTCD3-220ENST00000627371 FAM209AQ5JX71 171 aa17.29■□□□□ 0.36
PTCD3-220ENST00000627371 Q6ZR03 302 aa17.29■□□□□ 0.36
PTCD3-220ENST00000627371 OR5AS1Q8N127 324 aa17.29■□□□□ 0.36
PTCD3-220ENST00000627371 CNIH3Q8TBE1 160 aa17.29■□□□□ 0.36
PTCD3-220ENST00000627371 TFAP2CQ92754 450 aa17.29■□□□□ 0.36
PTCD3-220ENST00000627371 LGALS12Q96DT0 336 aa17.29■□□□□ 0.36
PTCD3-220ENST00000627371 PGAM5Q96HS1 289 aa17.29■□□□□ 0.36
PTCD3-220ENST00000627371 DIRC2Q96SL1 478 aa17.29■□□□□ 0.36
PTCD3-220ENST00000627371 FAM206AQ9NX38 181 aa17.29■□□□□ 0.36
PTCD3-220ENST00000627371 ZNF319Q9P2F9 582 aa17.29■□□□□ 0.36
PTCD3-220ENST00000627371 MRM2Q9UI43 246 aaKnown RBP17.29■□□□□ 0.36
PTCD3-220ENST00000627371 ZDHHC8Q9ULC8 765 aa17.29■□□□□ 0.36
PTCD3-220ENST00000627371 RRP15Q9Y3B9 282 aaKnown RBP17.29■□□□□ 0.36
PTCD3-220ENST00000627371 RPL36Q9Y3U8 105 aaKnown RBP17.29■□□□□ 0.36
PTCD3-220ENST00000627371 PCDHGB1Q9Y5G3 927 aa17.29■□□□□ 0.36
PTCD3-220ENST00000627371 MED13LQ71F56 2210 aa17.29■□□□□ 0.36
PTCD3-220ENST00000627371 F8P00451 2351 aa17.28■□□□□ 0.36
PTCD3-220ENST00000627371 TMEM269A0A1B0GVZ9 245 aa17.28■□□□□ 0.36
PTCD3-220ENST00000627371 ACOD1A6NK06 481 aa17.28■□□□□ 0.36
PTCD3-220ENST00000627371 MAGEB4O15481 346 aaPredicted RBP17.28■□□□□ 0.36
PTCD3-220ENST00000627371 NCR1O76036 304 aa17.28■□□□□ 0.36
PTCD3-220ENST00000627371 HPXP02790 462 aa17.28■□□□□ 0.36
PTCD3-220ENST00000627371 KRT8P05787 483 aa17.28■□□□□ 0.36
PTCD3-220ENST00000627371 GNAO1P09471 354 aa17.28■□□□□ 0.36
PTCD3-220ENST00000627371 DAOP14920 347 aa17.28■□□□□ 0.36
PTCD3-220ENST00000627371 ZNF85Q03923 595 aa17.28■□□□□ 0.36
PTCD3-220ENST00000627371 RAB40BQ12829 278 aa17.28■□□□□ 0.36
PTCD3-220ENST00000627371 CDK5R2Q13319 367 aa17.28■□□□□ 0.36
PTCD3-220ENST00000627371 ZNF684Q5T5D7 378 aa17.28■□□□□ 0.36
PTCD3-220ENST00000627371 C8orf59Q8N0T1 100 aaPredicted RBP17.28■□□□□ 0.36
PTCD3-220ENST00000627371 OR8G5Q8NG78 346 aa17.28■□□□□ 0.36
PTCD3-220ENST00000627371 OR8B12Q8NGG6 310 aa17.28■□□□□ 0.36
PTCD3-220ENST00000627371 SGK3Q96BR1 496 aa17.28■□□□□ 0.36
PTCD3-220ENST00000627371 REEP6Q96HR9 211 aa17.28■□□□□ 0.36
PTCD3-220ENST00000627371 RGCCQ9H4X1 137 aa17.28■□□□□ 0.36
PTCD3-220ENST00000627371 AMBNQ9NP70 447 aa17.28■□□□□ 0.36
PTCD3-220ENST00000627371 MRPS18AQ9NVS2 196 aaKnown RBP17.28■□□□□ 0.36
PTCD3-220ENST00000627371 HIVEP1P15822 2718 aa17.28■□□□□ 0.36
PTCD3-220ENST00000627371 CR1P17927 2039 aa17.27■□□□□ 0.36
PTCD3-220ENST00000627371 SRSF10O75494 262 aaKnown RBP17.27■□□□□ 0.36
PTCD3-220ENST00000627371 SULT1C4O75897 302 aa17.27■□□□□ 0.36
PTCD3-220ENST00000627371 CD55P08174 381 aa17.27■□□□□ 0.36
PTCD3-220ENST00000627371 CFL1P23528 166 aaKnown RBP17.27■□□□□ 0.36
PTCD3-220ENST00000627371 PDLIM4P50479 330 aa17.27■□□□□ 0.36
PTCD3-220ENST00000627371 MMP16P51512 607 aa17.27■□□□□ 0.36
PTCD3-220ENST00000627371 CCL8P80075 99 aa17.27■□□□□ 0.36
PTCD3-220ENST00000627371 SMN1Q16637 294 aaKnown RBP17.27■□□□□ 0.36
PTCD3-220ENST00000627371 TSTQ16762 297 aaKnown RBP17.27■□□□□ 0.36
PTCD3-220ENST00000627371 BHLHE23Q8NDY6 225 aa17.27■□□□□ 0.36
PTCD3-220ENST00000627371 UBASH3BQ8TF42 649 aa17.27■□□□□ 0.36
PTCD3-220ENST00000627371 FAM168AQ92567 244 aa17.27■□□□□ 0.36
PTCD3-220ENST00000627371 SLC30A2Q9BRI3 323 aa17.27■□□□□ 0.36
PTCD3-220ENST00000627371 RHNO1Q9BSD3 238 aa17.27■□□□□ 0.36
PTCD3-220ENST00000627371 hCG_38984A0A1B0GV85 526 aa17.26■□□□□ 0.35
PTCD3-220ENST00000627371 TRIM64A6NGJ6 449 aa17.26■□□□□ 0.35
PTCD3-220ENST00000627371 GGT3PA6NGU5 568 aa17.26■□□□□ 0.35
PTCD3-220ENST00000627371 TRIM64BA6NI03 449 aa17.26■□□□□ 0.35
PTCD3-220ENST00000627371 METTL15A6NJ78 407 aa17.26■□□□□ 0.35
PTCD3-220ENST00000627371 CD300LBA8K4G0 201 aa17.26■□□□□ 0.35
PTCD3-220ENST00000627371 LILRA1O75019 489 aa17.26■□□□□ 0.35
PTCD3-220ENST00000627371 MRPS11P82912 194 aaKnown RBP17.26■□□□□ 0.35
PTCD3-220ENST00000627371 FAM3AP98173 230 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms