RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 ATP6V1E1P36543 226 aa11.92□□□□□ -0.5
SNRPA1-216ENST00000626000 MAGEB1P43366 347 aa11.92□□□□□ -0.5
SNRPA1-216ENST00000626000 GPR6P46095 362 aaPredicted RBP11.92□□□□□ -0.5
SNRPA1-216ENST00000626000 GZMKP49863 264 aa11.92□□□□□ -0.5
SNRPA1-216ENST00000626000 SNRPGP62308 76 aaKnown RBP11.92□□□□□ -0.5
SNRPA1-216ENST00000626000 EGR3Q06889 387 aa11.92□□□□□ -0.5
SNRPA1-216ENST00000626000 RIN1Q13671 783 aa11.92□□□□□ -0.5
SNRPA1-216ENST00000626000 TIGD6Q17RP2 521 aa11.92□□□□□ -0.5
SNRPA1-216ENST00000626000 ALKBH6Q3KRA9 238 aa11.92□□□□□ -0.5
SNRPA1-216ENST00000626000 ZNF679Q8IYX0 411 aa11.92□□□□□ -0.5
SNRPA1-216ENST00000626000 CELF2-AS1Q8N7Q2 184 aa11.92□□□□□ -0.5
SNRPA1-216ENST00000626000 SPERTQ8NA61 448 aa11.92□□□□□ -0.5
SNRPA1-216ENST00000626000 ZNF555Q8NEP9 628 aa11.92□□□□□ -0.5
SNRPA1-216ENST00000626000 OR2Z1Q8NG97 314 aa11.92□□□□□ -0.5
SNRPA1-216ENST00000626000 RAB1CQ92928 201 aa11.92□□□□□ -0.5
SNRPA1-216ENST00000626000 SPSB4Q96A44 273 aa11.92□□□□□ -0.5
SNRPA1-216ENST00000626000 MRPL48Q96GC5 212 aaKnown RBP11.92□□□□□ -0.5
SNRPA1-216ENST00000626000 APOL4Q9BPW4 351 aa11.92□□□□□ -0.5
SNRPA1-216ENST00000626000 SLC30A2Q9BRI3 323 aa11.92□□□□□ -0.5
SNRPA1-216ENST00000626000 REPIN1Q9BWE0 567 aaKnown RBP11.92□□□□□ -0.5
SNRPA1-216ENST00000626000 BPESC1Q9GZL8 116 aa11.92□□□□□ -0.5
SNRPA1-216ENST00000626000 MOB1AQ9H8S9 216 aa11.92□□□□□ -0.5
SNRPA1-216ENST00000626000 ABCB9Q9NP78 766 aa11.92□□□□□ -0.5
SNRPA1-216ENST00000626000 TMEM100Q9NV29 134 aa11.92□□□□□ -0.5
SNRPA1-216ENST00000626000 CLN6Q9NWW5 311 aa11.92□□□□□ -0.5
SNRPA1-216ENST00000626000 SMPD3Q9NY59 655 aaPredicted RBP11.92□□□□□ -0.5
SNRPA1-216ENST00000626000 MRPL15Q9P015 296 aaKnown RBP11.92□□□□□ -0.5
SNRPA1-216ENST00000626000 GMPPBQ9Y5P6 360 aa11.92□□□□□ -0.5
SNRPA1-216ENST00000626000 C2CD3Q4AC94 2353 aa11.91□□□□□ -0.5
SNRPA1-216ENST00000626000 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.91□□□□□ -0.5
SNRPA1-216ENST00000626000 A0A1B0GWJ7 208 aa11.91□□□□□ -0.5
SNRPA1-216ENST00000626000 GGT3PA6NGU5 568 aa11.91□□□□□ -0.5
SNRPA1-216ENST00000626000 GMDSO60547 372 aa11.91□□□□□ -0.5
SNRPA1-216ENST00000626000 SBK2P0C263 348 aa11.91□□□□□ -0.5
SNRPA1-216ENST00000626000 OR2T7P0C7T2 308 aa11.91□□□□□ -0.5
SNRPA1-216ENST00000626000 ANPEPP15144 967 aa11.91□□□□□ -0.5
SNRPA1-216ENST00000626000 RIDAP52758 137 aaKnown RBP11.91□□□□□ -0.5
SNRPA1-216ENST00000626000 ACTC1P68032 377 aa11.91□□□□□ -0.5
SNRPA1-216ENST00000626000 ACTA1P68133 377 aa11.91□□□□□ -0.5
SNRPA1-216ENST00000626000 DBPQ10586 325 aaPredicted RBP11.91□□□□□ -0.5
SNRPA1-216ENST00000626000 HLXQ14774 488 aaPredicted RBP11.91□□□□□ -0.5
SNRPA1-216ENST00000626000 RCN1Q15293 331 aa11.91□□□□□ -0.5
SNRPA1-216ENST00000626000 OCLNQ16625 522 aa11.91□□□□□ -0.5
SNRPA1-216ENST00000626000 TSTQ16762 297 aaKnown RBP11.91□□□□□ -0.5
SNRPA1-216ENST00000626000 USP51Q70EK9 711 aa11.91□□□□□ -0.5
SNRPA1-216ENST00000626000 CIARTQ8N365 385 aaPredicted RBP11.91□□□□□ -0.5
SNRPA1-216ENST00000626000 CSNK2A3Q8NEV1 391 aa11.91□□□□□ -0.5
SNRPA1-216ENST00000626000 OR2T27Q8NH04 317 aa11.91□□□□□ -0.5
SNRPA1-216ENST00000626000 ERGIC1Q969X5 290 aa11.91□□□□□ -0.5
SNRPA1-216ENST00000626000 PGAM5Q96HS1 289 aa11.91□□□□□ -0.5
SNRPA1-216ENST00000626000 DCLRE1BQ9H816 532 aa11.91□□□□□ -0.5
SNRPA1-216ENST00000626000 ADGRL4Q9HBW9 690 aa11.91□□□□□ -0.5
SNRPA1-216ENST00000626000 MSL2Q9HCI7 577 aa11.91□□□□□ -0.5
SNRPA1-216ENST00000626000 A0A096LNT2 108 aa11.9□□□□□ -0.5
SNRPA1-216ENST00000626000 LRRC30A6NM36 301 aa11.9□□□□□ -0.5
SNRPA1-216ENST00000626000 CD300LBA8K4G0 201 aa11.9□□□□□ -0.5
SNRPA1-216ENST00000626000 SLC16A6O15403 523 aa11.9□□□□□ -0.5
SNRPA1-216ENST00000626000 TBX1O43435 398 aa11.9□□□□□ -0.5
SNRPA1-216ENST00000626000 RP2O75695 350 aa11.9□□□□□ -0.5
SNRPA1-216ENST00000626000 NCR1O76036 304 aa11.9□□□□□ -0.5
SNRPA1-216ENST00000626000 PSKH1P11801 424 aa11.9□□□□□ -0.5
SNRPA1-216ENST00000626000 ATP6V1B1P15313 513 aa11.9□□□□□ -0.5
SNRPA1-216ENST00000626000 POLR2IP36954 125 aaKnown RBP11.9□□□□□ -0.5
SNRPA1-216ENST00000626000 MTNR1AP48039 350 aa11.9□□□□□ -0.5
SNRPA1-216ENST00000626000 ZNF121P58317 390 aaPredicted RBP11.9□□□□□ -0.5
SNRPA1-216ENST00000626000 TRIP10Q15642 601 aa11.9□□□□□ -0.5
SNRPA1-216ENST00000626000 TMEM249Q2WGJ8 235 aa11.9□□□□□ -0.5
SNRPA1-216ENST00000626000 SNAI3Q3KNW1 292 aa11.9□□□□□ -0.5
SNRPA1-216ENST00000626000 OR2T2Q6IF00 324 aa11.9□□□□□ -0.5
SNRPA1-216ENST00000626000 SPATC1Q76KD6 591 aa11.9□□□□□ -0.5
SNRPA1-216ENST00000626000 EGFL6Q8IUX8 553 aa11.9□□□□□ -0.5
SNRPA1-216ENST00000626000 SLC35F2Q8IXU6 374 aa11.9□□□□□ -0.5
SNRPA1-216ENST00000626000 PLPP7Q8NBV4 271 aa11.9□□□□□ -0.5
SNRPA1-216ENST00000626000 OR8B4Q96RC9 309 aa11.9□□□□□ -0.5
SNRPA1-216ENST00000626000 POFUT1Q9H488 388 aa11.9□□□□□ -0.5
SNRPA1-216ENST00000626000 ZNF275Q9NSD4 429 aaPredicted RBP11.9□□□□□ -0.5
SNRPA1-216ENST00000626000 IKZF2Q9UKS7 526 aa11.9□□□□□ -0.5
SNRPA1-216ENST00000626000 LRP12Q9Y561 859 aa11.9□□□□□ -0.5
SNRPA1-216ENST00000626000 MTORP42345 2549 aa11.89□□□□□ -0.51
SNRPA1-216ENST00000626000 A0A0U1RQV5 110 aa11.89□□□□□ -0.51
SNRPA1-216ENST00000626000 LOC100130705A0A1B0GUX0 176 aa11.89□□□□□ -0.51
SNRPA1-216ENST00000626000 ANKRD30BLA7E2S9 258 aa11.89□□□□□ -0.51
SNRPA1-216ENST00000626000 PPIHO43447 177 aaKnown RBP11.89□□□□□ -0.51
SNRPA1-216ENST00000626000 CD5LO43866 347 aa11.89□□□□□ -0.51
SNRPA1-216ENST00000626000 KRT8P05787 483 aa11.89□□□□□ -0.51
SNRPA1-216ENST00000626000 MRPL3P09001 348 aaKnown RBP11.89□□□□□ -0.51
SNRPA1-216ENST00000626000 PCMT1P22061 227 aa11.89□□□□□ -0.51
SNRPA1-216ENST00000626000 CPT2P23786 658 aa11.89□□□□□ -0.51
SNRPA1-216ENST00000626000 MMP16P51512 607 aa11.89□□□□□ -0.51
SNRPA1-216ENST00000626000 ZNF92Q03936 586 aa11.89□□□□□ -0.51
SNRPA1-216ENST00000626000 ZNF181Q2M3W8 571 aa11.89□□□□□ -0.51
SNRPA1-216ENST00000626000 GLYATL3Q5SZD4 288 aa11.89□□□□□ -0.51
SNRPA1-216ENST00000626000 TTC23Q5W5X9 447 aa11.89□□□□□ -0.51
SNRPA1-216ENST00000626000 CYB5R2Q6BCY4 276 aa11.89□□□□□ -0.51
SNRPA1-216ENST00000626000 ZNF322Q6U7Q0 402 aaPredicted RBP11.89□□□□□ -0.51
SNRPA1-216ENST00000626000 LRRN1Q6UXK5 716 aa11.89□□□□□ -0.51
SNRPA1-216ENST00000626000 FAM57BQ71RH2 274 aa11.89□□□□□ -0.51
SNRPA1-216ENST00000626000 PRSS45Q7RTY3 260 aa11.89□□□□□ -0.51
SNRPA1-216ENST00000626000 C1orf87Q8N0U7 546 aa11.89□□□□□ -0.51
SNRPA1-216ENST00000626000 SETD9Q8NE22 299 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms