RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 MSL2Q9HCI7 577 aa5.43□□□□□ -1.54
TCF4-249ENST00000625716 VNN3Q9NY84 501 aa5.43□□□□□ -1.54
TCF4-249ENST00000625716 TREM2Q9NZC2 230 aa5.43□□□□□ -1.54
TCF4-249ENST00000625716 KIF17Q9P2E2 1029 aa5.43□□□□□ -1.54
TCF4-249ENST00000625716 DNAJB9Q9UBS3 223 aa5.43□□□□□ -1.54
TCF4-249ENST00000625716 CYB5R1Q9UHQ9 305 aa5.43□□□□□ -1.54
TCF4-249ENST00000625716 TMEFF2Q9UIK5 374 aaPredicted RBP5.43□□□□□ -1.54
TCF4-249ENST00000625716 C2CD3Q4AC94 2353 aa5.43□□□□□ -1.54
TCF4-249ENST00000625716 ALPK2Q86TB3 2170 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 HIVEP2P31629 2446 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 ARRDC5A6NEK1 342 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 TVP23AA6NH52 213 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 ZSCAN5BA6NJL1 495 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 ZNF593O00488 134 aaPredicted RBP5.42□□□□□ -1.54
TCF4-249ENST00000625716 FKBP6O75344 327 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 RP2O75695 350 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 HMGN1P05114 100 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 GYPBP06028 91 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 CD55P08174 381 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 ADH4P08319 380 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 SPARCP09486 303 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 FAM157CP0CG43 387 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 ANXA8P13928 327 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 SPI1P17947 270 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 IGFBP5P24593 272 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 IL2RGP31785 369 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 GRK5P34947 590 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 GGT2P36268 569 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 SRP14P37108 136 aaKnown RBP5.42□□□□□ -1.54
TCF4-249ENST00000625716 SLC15A1P46059 708 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 SRP9P49458 86 aaKnown RBP5.42□□□□□ -1.54
TCF4-249ENST00000625716 ENTPD1P49961 510 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 SLC25A1P53007 311 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 RAD23AP54725 363 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 BNIP1Q12981 228 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 CRMP1Q14194 572 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 GINS1Q14691 196 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 HLXQ14774 488 aaPredicted RBP5.42□□□□□ -1.54
TCF4-249ENST00000625716 CR1LQ2VPA4 569 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 FAM120AOSQ5T036 256 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 OR2T2Q6IF00 324 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 ACSM5Q6NUN0 579 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 CD300LDQ6UXZ3 194 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 FBXW12Q6X9E4 464 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 CFAP77Q6ZQR2 320 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 MRPL21Q7Z2W9 205 aaKnown RBP5.42□□□□□ -1.54
TCF4-249ENST00000625716 DCXRQ7Z4W1 244 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 OR5AS1Q8N127 324 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 OR8G5Q8NG78 346 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 OR8D4Q8NGM9 314 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 OR6K6Q8NGW6 343 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 OR13G1Q8NGZ3 307 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 OR4Q3Q8NH05 313 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 OR51F2Q8NH61 342 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 ST7LQ8TDW4 575 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 SPRYD4Q8WW59 207 aaPredicted RBP5.42□□□□□ -1.54
TCF4-249ENST00000625716 SLCO4A1Q96BD0 722 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 SLC7A6OSQ96CW6 309 aaPredicted RBP5.42□□□□□ -1.54
TCF4-249ENST00000625716 GAL3ST1Q99999 423 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 COPS4Q9BT78 406 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 RBM4Q9BWF3 364 aaKnown RBP5.42□□□□□ -1.54
TCF4-249ENST00000625716 MMADHCQ9H3L0 296 aaPredicted RBP5.42□□□□□ -1.54
TCF4-249ENST00000625716 POFUT1Q9H488 388 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 ZNF665Q9H7R5 613 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 SP140LQ9H930 580 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 LPAR2Q9HBW0 351 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 CMC2Q9NRP2 79 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 CENPMQ9NSP4 180 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 TMEM100Q9NV29 134 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 IL19Q9UHD0 177 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 PCDHB10Q9UN67 800 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 POMPQ9Y244 141 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 N6AMT1Q9Y5N5 214 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 PLCE1Q9P212 2302 aa5.42□□□□□ -1.54
TCF4-249ENST00000625716 ZNF469Q96JG9 3925 aaPredicted RBP5.42□□□□□ -1.54
TCF4-249ENST00000625716 MTORP42345 2549 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 MAP1AP78559 2803 aaPredicted RBP5.41□□□□□ -1.54
TCF4-249ENST00000625716 TCRBV3S1A0A5B6 114 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 GGT3PA6NGU5 568 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 LRRC30A6NM36 301 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 PRR23D1E9PI22 279 aaPredicted RBP5.41□□□□□ -1.54
TCF4-249ENST00000625716 IFNL4K9M1U5 179 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 M0R135 149 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 CIB2O75838 187 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 APOC1P02654 83 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 MSMBP08118 114 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 SBK2P0C263 348 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 ACSM4P0C7M7 580 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 PRR23D2P0DMB1 279 aaPredicted RBP5.41□□□□□ -1.54
TCF4-249ENST00000625716 OSMP13725 252 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 IRF2P14316 349 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 PRKACGP22612 351 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 HSD11B1P28845 292 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 RPS27P42677 84 aaKnown RBP5.41□□□□□ -1.54
TCF4-249ENST00000625716 ERFP50548 548 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 DVL1P1P54792 670 aaPredicted RBP5.41□□□□□ -1.54
TCF4-249ENST00000625716 SLURP1P55000 103 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 RPS7P62081 194 aaKnown RBP5.41□□□□□ -1.54
TCF4-249ENST00000625716 GRB2P62993 217 aaKnown RBP5.41□□□□□ -1.54
TCF4-249ENST00000625716 DBPQ10586 325 aaPredicted RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms