RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 KCTD18Q6PI47 426 aaPredicted RBP17.1■□□□□ 0.33
R3HCC1-210ENST00000625275 SGCDQ92629 289 aa17.1■□□□□ 0.33
R3HCC1-210ENST00000625275 OR8B4Q96RC9 309 aa17.1■□□□□ 0.33
R3HCC1-210ENST00000625275 SCN3BQ9NY72 215 aa17.1■□□□□ 0.33
R3HCC1-210ENST00000625275 SLCO1C1Q9NYB5 712 aa17.1■□□□□ 0.33
R3HCC1-210ENST00000625275 DNHD1Q96M86 4753 aa17.09■□□□□ 0.33
R3HCC1-210ENST00000625275 LOC390937A0A1W2PQ73 354 aa17.09■□□□□ 0.33
R3HCC1-210ENST00000625275 VSTM5A8MXK1 200 aa17.09■□□□□ 0.33
R3HCC1-210ENST00000625275 PTGES3LE9PB15 166 aa17.09■□□□□ 0.33
R3HCC1-210ENST00000625275 IFNA2P01563 188 aa17.09■□□□□ 0.33
R3HCC1-210ENST00000625275 DCKP27707 260 aa17.09■□□□□ 0.33
R3HCC1-210ENST00000625275 OTX1P32242 354 aaPredicted RBP17.09■□□□□ 0.33
R3HCC1-210ENST00000625275 NR4A2P43354 598 aa17.09■□□□□ 0.33
R3HCC1-210ENST00000625275 SLC35A2P78381 396 aa17.09■□□□□ 0.33
R3HCC1-210ENST00000625275 GALK2Q01415 458 aa17.09■□□□□ 0.33
R3HCC1-210ENST00000625275 EGR3Q06889 387 aa17.09■□□□□ 0.33
R3HCC1-210ENST00000625275 SNTB2Q13425 540 aaKnown RBP17.09■□□□□ 0.33
R3HCC1-210ENST00000625275 TAF13Q15543 124 aa17.09■□□□□ 0.33
R3HCC1-210ENST00000625275 CARTPTQ16568 116 aa17.09■□□□□ 0.33
R3HCC1-210ENST00000625275 RBM48Q5RL73 367 aaKnown RBP17.09■□□□□ 0.33
R3HCC1-210ENST00000625275 KRT77Q7Z794 578 aa17.09■□□□□ 0.33
R3HCC1-210ENST00000625275 OR1J2Q8NGS2 313 aa17.09■□□□□ 0.33
R3HCC1-210ENST00000625275 ZNF649Q9BS31 505 aa17.09■□□□□ 0.33
R3HCC1-210ENST00000625275 JAM3Q9BX67 310 aa17.09■□□□□ 0.33
R3HCC1-210ENST00000625275 RAB1BQ9H0U4 201 aa17.09■□□□□ 0.33
R3HCC1-210ENST00000625275 CDH20Q9HBT6 801 aa17.09■□□□□ 0.33
R3HCC1-210ENST00000625275 TMEM160Q9NX00 188 aa17.09■□□□□ 0.33
R3HCC1-210ENST00000625275 CDC42EP3Q9UKI2 254 aa17.09■□□□□ 0.33
R3HCC1-210ENST00000625275 DIMT1Q9UNQ2 313 aaKnown RBP17.09■□□□□ 0.33
R3HCC1-210ENST00000625275 LRP12Q9Y561 859 aa17.09■□□□□ 0.33
R3HCC1-210ENST00000625275 F5H5K5 113 aa17.08■□□□□ 0.32
R3HCC1-210ENST00000625275 H2BFMP0C1H6 154 aa17.08■□□□□ 0.32
R3HCC1-210ENST00000625275 GRB2P62993 217 aaKnown RBP17.08■□□□□ 0.32
R3HCC1-210ENST00000625275 ZNF684Q5T5D7 378 aa17.08■□□□□ 0.32
R3HCC1-210ENST00000625275 LHFPL3Q86UP9 236 aa17.08■□□□□ 0.32
R3HCC1-210ENST00000625275 ZNF679Q8IYX0 411 aa17.08■□□□□ 0.32
R3HCC1-210ENST00000625275 TMEM80Q96HE8 168 aa17.08■□□□□ 0.32
R3HCC1-210ENST00000625275 KCNJ15Q99712 375 aa17.08■□□□□ 0.32
R3HCC1-210ENST00000625275 MROQ9BYG7 248 aa17.08■□□□□ 0.32
R3HCC1-210ENST00000625275 DUSP21Q9H596 190 aa17.08■□□□□ 0.32
R3HCC1-210ENST00000625275 INPP5EQ9NRR6 644 aa17.08■□□□□ 0.32
R3HCC1-210ENST00000625275 ERVK13-1Q9NX77 482 aa17.08■□□□□ 0.32
R3HCC1-210ENST00000625275 MRM2Q9UI43 246 aaKnown RBP17.08■□□□□ 0.32
R3HCC1-210ENST00000625275 IKZF2Q9UKS7 526 aa17.08■□□□□ 0.32
R3HCC1-210ENST00000625275 LRCH1Q9Y2L9 728 aa17.08■□□□□ 0.32
R3HCC1-210ENST00000625275 TPRKBQ9Y3C4 175 aa17.08■□□□□ 0.32
R3HCC1-210ENST00000625275 ACSM4P0C7M7 580 aa17.07■□□□□ 0.32
R3HCC1-210ENST00000625275 LIMS3P0CW19 117 aa17.07■□□□□ 0.32
R3HCC1-210ENST00000625275 LIMS4P0CW20 117 aa17.07■□□□□ 0.32
R3HCC1-210ENST00000625275 C21orf33P30042 268 aaPredicted RBP17.07■□□□□ 0.32
R3HCC1-210ENST00000625275 WNT5AP41221 380 aa17.07■□□□□ 0.32
R3HCC1-210ENST00000625275 GZMKP49863 264 aa17.07■□□□□ 0.32
R3HCC1-210ENST00000625275 GALEQ14376 348 aa17.07■□□□□ 0.32
R3HCC1-210ENST00000625275 DEGS2Q6QHC5 323 aa17.07■□□□□ 0.32
R3HCC1-210ENST00000625275 ZNF101Q8IZC7 436 aa17.07■□□□□ 0.32
R3HCC1-210ENST00000625275 STX19Q8N4C7 294 aa17.07■□□□□ 0.32
R3HCC1-210ENST00000625275 SPTSSAQ969W0 71 aa17.07■□□□□ 0.32
R3HCC1-210ENST00000625275 DOK1Q99704 481 aa17.07■□□□□ 0.32
R3HCC1-210ENST00000625275 ALG8Q9BVK2 526 aa17.07■□□□□ 0.32
R3HCC1-210ENST00000625275 ELOVL3Q9HB03 270 aa17.07■□□□□ 0.32
R3HCC1-210ENST00000625275 M0R135 149 aa17.06■□□□□ 0.32
R3HCC1-210ENST00000625275 ICMTO60725 284 aa17.06■□□□□ 0.32
R3HCC1-210ENST00000625275 ABHD16AO95870 558 aa17.06■□□□□ 0.32
R3HCC1-210ENST00000625275 CDK1P06493 297 aa17.06■□□□□ 0.32
R3HCC1-210ENST00000625275 ERCC1P07992 297 aaPredicted RBP17.06■□□□□ 0.32
R3HCC1-210ENST00000625275 FAM157CP0CG43 387 aa17.06■□□□□ 0.32
R3HCC1-210ENST00000625275 HSD11B1P28845 292 aa17.06■□□□□ 0.32
R3HCC1-210ENST00000625275 ETV1P50549 477 aa17.06■□□□□ 0.32
R3HCC1-210ENST00000625275 PRKXP51817 358 aa17.06■□□□□ 0.32
R3HCC1-210ENST00000625275 CDONQ4KMG0 1287 aa17.06■□□□□ 0.32
R3HCC1-210ENST00000625275 NAA40Q86UY6 237 aa17.06■□□□□ 0.32
R3HCC1-210ENST00000625275 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.06■□□□□ 0.32
R3HCC1-210ENST00000625275 SPATA3Q8NHX4 192 aa17.06■□□□□ 0.32
R3HCC1-210ENST00000625275 SNX33Q8WV41 574 aa17.06■□□□□ 0.32
R3HCC1-210ENST00000625275 ZNF799Q96GE5 643 aa17.06■□□□□ 0.32
R3HCC1-210ENST00000625275 C4orf45Q96LM5 186 aa17.06■□□□□ 0.32
R3HCC1-210ENST00000625275 DYNLRB1Q9NP97 96 aa17.06■□□□□ 0.32
R3HCC1-210ENST00000625275 BLOC1S6Q9UL45 172 aa17.06■□□□□ 0.32
R3HCC1-210ENST00000625275 GRIP1Q9Y3R0 1128 aa17.06■□□□□ 0.32
R3HCC1-210ENST00000625275 TMEM129A0AVI4 362 aa17.05■□□□□ 0.32
R3HCC1-210ENST00000625275 ZNF254O75437 659 aa17.05■□□□□ 0.32
R3HCC1-210ENST00000625275 KRT8P05787 483 aa17.05■□□□□ 0.32
R3HCC1-210ENST00000625275 MYL12AP19105 171 aa17.05■□□□□ 0.32
R3HCC1-210ENST00000625275 NR4A1P22736 598 aa17.05■□□□□ 0.32
R3HCC1-210ENST00000625275 CX3CR1P49238 355 aa17.05■□□□□ 0.32
R3HCC1-210ENST00000625275 TPTEP56180 551 aa17.05■□□□□ 0.32
R3HCC1-210ENST00000625275 TP53I3Q53FA7 332 aa17.05■□□□□ 0.32
R3HCC1-210ENST00000625275 PLEKHG7Q6ZR37 379 aa17.05■□□□□ 0.32
R3HCC1-210ENST00000625275 IPCEF1Q8WWN9 437 aaPredicted RBP17.05■□□□□ 0.32
R3HCC1-210ENST00000625275 NEU4Q8WWR8 484 aaPredicted RBP17.05■□□□□ 0.32
R3HCC1-210ENST00000625275 MYDGFQ969H8 173 aa17.05■□□□□ 0.32
R3HCC1-210ENST00000625275 SIGLEC11Q96RL6 698 aa17.05■□□□□ 0.32
R3HCC1-210ENST00000625275 DCLRE1CQ96SD1 692 aaKnown RBP17.05■□□□□ 0.32
R3HCC1-210ENST00000625275 OR51B6Q9H340 312 aa17.05■□□□□ 0.32
R3HCC1-210ENST00000625275 ERVK-18Q9QC07 812 aa17.05■□□□□ 0.32
R3HCC1-210ENST00000625275 LPAR3Q9UBY5 353 aa17.05■□□□□ 0.32
R3HCC1-210ENST00000625275 CLEC2DQ9UHP7 191 aa17.05■□□□□ 0.32
R3HCC1-210ENST00000625275 EXOSC1Q9Y3B2 195 aaKnown RBP17.05■□□□□ 0.32
R3HCC1-210ENST00000625275 CMAHPQ9Y471 501 aa17.05■□□□□ 0.32
R3HCC1-210ENST00000625275 IGHV4-61A0A0C4DH41 118 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms