RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 BIDP55957 195 aa8.1□□□□□ -1.11
VCL-206ENST00000623461 TMEM268Q5VZI3 342 aa8.1□□□□□ -1.11
VCL-206ENST00000623461 GJC3Q8NFK1 279 aa8.1□□□□□ -1.11
VCL-206ENST00000623461 LCORQ96JN0 433 aaPredicted RBP8.1□□□□□ -1.11
VCL-206ENST00000623461 SOX7Q9BT81 388 aa8.1□□□□□ -1.11
VCL-206ENST00000623461 TINAGL1Q9GZM7 467 aaPredicted RBP8.1□□□□□ -1.11
VCL-206ENST00000623461 MS4A7Q9GZW8 240 aaPredicted RBP8.1□□□□□ -1.11
VCL-206ENST00000623461 DOCK1Q14185 1865 aa8.1□□□□□ -1.11
VCL-206ENST00000623461 PQLC2LA1A4F0 135 aa8.09□□□□□ -1.11
VCL-206ENST00000623461 PRKRAO75569 313 aaKnown RBP8.09□□□□□ -1.11
VCL-206ENST00000623461 ZNF750Q32MQ0 723 aa8.09□□□□□ -1.11
VCL-206ENST00000623461 OR8G2PQ6IF36 304 aa8.09□□□□□ -1.11
VCL-206ENST00000623461 NUDT9Q9BW91 350 aa8.09□□□□□ -1.11
VCL-206ENST00000623461 PLA2G12AQ9BZM1 189 aa8.09□□□□□ -1.11
VCL-206ENST00000623461 SLC6A13Q9NSD5 602 aa8.09□□□□□ -1.11
VCL-206ENST00000623461 NTMQ9P121 344 aa8.09□□□□□ -1.11
VCL-206ENST00000623461 CTSFQ9UBX1 484 aa8.09□□□□□ -1.11
VCL-206ENST00000623461 ZNF107Q9UII5 783 aaPredicted RBP8.09□□□□□ -1.11
VCL-206ENST00000623461 KCND3Q9UK17 655 aa8.09□□□□□ -1.11
VCL-206ENST00000623461 CD200P41217 278 aa8.09□□□□□ -1.11
VCL-206ENST00000623461 HTR5AP47898 357 aa8.09□□□□□ -1.11
VCL-206ENST00000623461 CPT1CQ8TCG5 803 aa8.09□□□□□ -1.11
VCL-206ENST00000623461 INTS12Q96CB8 462 aaKnown RBP8.09□□□□□ -1.11
VCL-206ENST00000623461 MEGF10Q96KG7 1140 aa8.09□□□□□ -1.11
VCL-206ENST00000623461 RASL12Q9NYN1 266 aa8.09□□□□□ -1.11
VCL-206ENST00000623461 HAO2Q9NYQ3 351 aa8.09□□□□□ -1.11
VCL-206ENST00000623461 TMEM184BQ9Y519 407 aaPredicted RBP8.09□□□□□ -1.11
VCL-206ENST00000623461 SERPINE3A8MV23 424 aa8.09□□□□□ -1.11
VCL-206ENST00000623461 APEHP13798 732 aaKnown RBP8.09□□□□□ -1.11
VCL-206ENST00000623461 NTSR1P30989 418 aa8.09□□□□□ -1.11
VCL-206ENST00000623461 MVDP53602 400 aa8.09□□□□□ -1.11
VCL-206ENST00000623461 TMEM241Q24JQ0 296 aa8.09□□□□□ -1.11
VCL-206ENST00000623461 CCSMST1Q4G0I0 132 aa8.09□□□□□ -1.11
VCL-206ENST00000623461 ARIH2OSQ8N7S6 290 aa8.09□□□□□ -1.11
VCL-206ENST00000623461 MR1Q95460 341 aa8.09□□□□□ -1.11
VCL-206ENST00000623461 MRPL38Q96DV4 380 aaKnown RBP8.09□□□□□ -1.11
VCL-206ENST00000623461 PIGLQ9Y2B2 252 aa8.09□□□□□ -1.11
VCL-206ENST00000623461 APC2O95996 2303 aa8.09□□□□□ -1.11
VCL-206ENST00000623461 SLC25A4P12235 298 aa8.09□□□□□ -1.11
VCL-206ENST00000623461 HOXB1P14653 301 aaPredicted RBP8.09□□□□□ -1.11
VCL-206ENST00000623461 MSX1P28360 303 aa8.09□□□□□ -1.11
VCL-206ENST00000623461 PIGPP57054 158 aa8.09□□□□□ -1.11
VCL-206ENST00000623461 HLA-DRB3P79483 266 aa8.09□□□□□ -1.11
VCL-206ENST00000623461 C17orf67Q0P5P2 114 aa8.09□□□□□ -1.11
VCL-206ENST00000623461 TIGITQ495A1 244 aa8.09□□□□□ -1.11
VCL-206ENST00000623461 MS4A6EQ96DS6 147 aa8.09□□□□□ -1.11
VCL-206ENST00000623461 PITPNC1Q9UKF7 332 aa8.09□□□□□ -1.11
VCL-206ENST00000623461 PRSS38A1L453 326 aa8.09□□□□□ -1.11
VCL-206ENST00000623461 ZNF749O43361 778 aa8.09□□□□□ -1.11
VCL-206ENST00000623461 IL13RA2Q14627 380 aa8.09□□□□□ -1.11
VCL-206ENST00000623461 SEZ6L2Q6UXD5 910 aa8.09□□□□□ -1.11
VCL-206ENST00000623461 SLC39A5Q6ZMH5 540 aa8.09□□□□□ -1.11
VCL-206ENST00000623461 OR10J5Q8NHC4 309 aa8.09□□□□□ -1.11
VCL-206ENST00000623461 MTCH1Q9NZJ7 389 aa8.09□□□□□ -1.11
VCL-206ENST00000623461 CACFD1Q9UGQ2 172 aa8.09□□□□□ -1.11
VCL-206ENST00000623461 NTNG1Q9Y2I2 539 aa8.09□□□□□ -1.11
VCL-206ENST00000623461 C2orf72A6NCS6 295 aa8.09□□□□□ -1.11
VCL-206ENST00000623461 HCRTR1O43613 425 aa8.09□□□□□ -1.11
VCL-206ENST00000623461 TBX19O60806 448 aa8.09□□□□□ -1.11
VCL-206ENST00000623461 LY86O95711 162 aa8.09□□□□□ -1.11
VCL-206ENST00000623461 WNT11O96014 354 aa8.09□□□□□ -1.11
VCL-206ENST00000623461 NPBWR1P48145 328 aa8.09□□□□□ -1.11
VCL-206ENST00000623461 C21orf58P58505 322 aa8.09□□□□□ -1.11
VCL-206ENST00000623461 C1orf140Q5VVS0 124 aa8.09□□□□□ -1.11
VCL-206ENST00000623461 MED25Q71SY5 747 aa8.09□□□□□ -1.11
VCL-206ENST00000623461 RTL10Q7L3V2 364 aa8.09□□□□□ -1.11
VCL-206ENST00000623461 OR2AE1Q8NHA4 323 aa8.09□□□□□ -1.11
VCL-206ENST00000623461 ADGRL4Q9HBW9 690 aa8.09□□□□□ -1.11
VCL-206ENST00000623461 hCG_1809904A0A1W2PP81 198 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 A0A1W2PR64 198 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 A0A1W2PRV1 198 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 C7orf77A4D0Y5 90 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 CD79AP11912 226 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 OR10J1P30954 320 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 P2RY2P41231 377 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 PPP1R1AQ13522 171 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 KLF9Q13886 244 aaPredicted RBP8.08□□□□□ -1.12
VCL-206ENST00000623461 CEBPEQ15744 281 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 H1FNTQ75WM6 255 aaPredicted RBP8.08□□□□□ -1.12
VCL-206ENST00000623461 SLC16A14Q7RTX9 510 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 OR10P1Q8NGE3 313 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 CIB3Q96Q77 187 aaPredicted RBP8.08□□□□□ -1.12
VCL-206ENST00000623461 OR5V1Q9UGF6 321 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 ZNF346Q9UL40 294 aaKnown RBP8.08□□□□□ -1.12
VCL-206ENST00000623461 WDR81Q562E7 1941 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 DOK2O60496 412 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 SEMG1P04279 462 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 WNT3P56703 355 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 HSF1Q00613 529 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 C21orf62-AS1Q17RA5 79 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 OR5B3Q8NH48 314 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 CTDSP1Q9GZU7 261 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 WWTR1Q9GZV5 400 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 SHARPINQ9H0F6 387 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 Q9N2K0 584 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 MPTX1A8MV57 137 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 CDRT15L2A8MXV6 281 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 BSGP35613 385 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.08□□□□□ -1.12
VCL-206ENST00000623461 OR2B11Q5JQS5 317 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms