RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 OPN3Q9H1Y3 402 aaPredicted RBP9.24□□□□□ -0.93
VPS11-208ENST00000621676 NUFIP1Q9UHK0 495 aaKnown RBP9.24□□□□□ -0.93
VPS11-208ENST00000621676 ZNF230Q9UIE0 474 aaPredicted RBP9.24□□□□□ -0.93
VPS11-208ENST00000621676 CUBNO60494 3623 aa9.23□□□□□ -0.93
VPS11-208ENST00000621676 FUOMA2VDF0 154 aa9.23□□□□□ -0.93
VPS11-208ENST00000621676 ZNF587BE7ETH6 402 aa9.23□□□□□ -0.93
VPS11-208ENST00000621676 OGG1O15527 345 aa9.23□□□□□ -0.93
VPS11-208ENST00000621676 RLN1P04808 185 aa9.23□□□□□ -0.93
VPS11-208ENST00000621676 TMEM225BP0DP42 221 aa9.23□□□□□ -0.93
VPS11-208ENST00000621676 ARSBP15848 533 aa9.23□□□□□ -0.93
VPS11-208ENST00000621676 EIF2B2P49770 351 aaKnown RBP9.23□□□□□ -0.93
VPS11-208ENST00000621676 GFRA1P56159 465 aa9.23□□□□□ -0.93
VPS11-208ENST00000621676 OR52W1Q6IF63 320 aa9.23□□□□□ -0.93
VPS11-208ENST00000621676 ZBTB8BQ8NAP8 495 aaPredicted RBP9.23□□□□□ -0.93
VPS11-208ENST00000621676 TMEM178AQ8NBL3 297 aa9.23□□□□□ -0.93
VPS11-208ENST00000621676 TMEM104Q8NE00 496 aa9.23□□□□□ -0.93
VPS11-208ENST00000621676 CPEB3Q8NE35 698 aaKnown RBP9.23□□□□□ -0.93
VPS11-208ENST00000621676 RNF128Q8TEB7 428 aa9.23□□□□□ -0.93
VPS11-208ENST00000621676 NUDCD2Q8WVJ2 157 aa9.23□□□□□ -0.93
VPS11-208ENST00000621676 JAM3Q9BX67 310 aa9.23□□□□□ -0.93
VPS11-208ENST00000621676 OR10A4Q9H209 315 aa9.23□□□□□ -0.93
VPS11-208ENST00000621676 SIAEQ9HAT2 523 aa9.23□□□□□ -0.93
VPS11-208ENST00000621676 NOX3Q9HBY0 568 aa9.23□□□□□ -0.93
VPS11-208ENST00000621676 TBC1D24Q9ULP9 559 aa9.23□□□□□ -0.93
VPS11-208ENST00000621676 NOTOA8MTQ0 251 aa9.23□□□□□ -0.93
VPS11-208ENST00000621676 MRPS14O60783 128 aaKnown RBP9.23□□□□□ -0.93
VPS11-208ENST00000621676 CRTAPO75718 401 aaPredicted RBP9.23□□□□□ -0.93
VPS11-208ENST00000621676 TXNDC12O95881 172 aa9.23□□□□□ -0.93
VPS11-208ENST00000621676 UCHL1P09936 223 aa9.23□□□□□ -0.93
VPS11-208ENST00000621676 FCGR2AP12318 317 aa9.23□□□□□ -0.93
VPS11-208ENST00000621676 EVX1P49640 407 aa9.23□□□□□ -0.93
VPS11-208ENST00000621676 FABP6P51161 128 aa9.23□□□□□ -0.93
VPS11-208ENST00000621676 H3F3AP84243 136 aa9.23□□□□□ -0.93
VPS11-208ENST00000621676 SLC35B4Q969S0 331 aa9.23□□□□□ -0.93
VPS11-208ENST00000621676 MRPL48Q96GC5 212 aaKnown RBP9.23□□□□□ -0.93
VPS11-208ENST00000621676 SRRQ9GZT4 340 aa9.23□□□□□ -0.93
VPS11-208ENST00000621676 CNTD2Q9H8S5 307 aa9.23□□□□□ -0.93
VPS11-208ENST00000621676 NUDT15Q9NV35 164 aa9.23□□□□□ -0.93
VPS11-208ENST00000621676 PAQR5Q9NXK6 330 aaPredicted RBP9.23□□□□□ -0.93
VPS11-208ENST00000621676 UGT2A1Q9Y4X1 527 aa9.23□□□□□ -0.93
VPS11-208ENST00000621676 TRAV39A0A0B4J263 110 aa9.23□□□□□ -0.93
VPS11-208ENST00000621676 A0A0G2JK05 382 aa9.23□□□□□ -0.93
VPS11-208ENST00000621676 NOS1APO75052 506 aaPredicted RBP9.23□□□□□ -0.93
VPS11-208ENST00000621676 TSC22D2O75157 780 aa9.23□□□□□ -0.93
VPS11-208ENST00000621676 PI3P19957 117 aa9.23□□□□□ -0.93
VPS11-208ENST00000621676 FGF9P31371 208 aaPredicted RBP9.23□□□□□ -0.93
VPS11-208ENST00000621676 GPR50Q13585 617 aa9.23□□□□□ -0.93
VPS11-208ENST00000621676 C17orf107Q6ZR85 190 aa9.23□□□□□ -0.93
VPS11-208ENST00000621676 TMED4Q7Z7H5 227 aa9.23□□□□□ -0.93
VPS11-208ENST00000621676 SYS1Q8N2H4 156 aa9.23□□□□□ -0.93
VPS11-208ENST00000621676 ZADH2Q8N4Q0 377 aa9.23□□□□□ -0.93
VPS11-208ENST00000621676 PAQR4Q8N4S7 273 aaPredicted RBP9.23□□□□□ -0.93
VPS11-208ENST00000621676 OR4D10Q8NGI6 311 aa9.23□□□□□ -0.93
VPS11-208ENST00000621676 RBMXL1Q96E39 390 aaKnown RBP9.23□□□□□ -0.93
VPS11-208ENST00000621676 ZNF488Q96MN9 340 aa9.23□□□□□ -0.93
VPS11-208ENST00000621676 DUSP13Q9UII6 198 aa9.23□□□□□ -0.93
VPS11-208ENST00000621676 CPAMD8Q8IZJ3 1885 aa9.22□□□□□ -0.93
VPS11-208ENST00000621676 ZNF716A6NP11 495 aa9.22□□□□□ -0.93
VPS11-208ENST00000621676 ZNF878C9JN71 531 aa9.22□□□□□ -0.93
VPS11-208ENST00000621676 GAAP10253 952 aa9.22□□□□□ -0.93
VPS11-208ENST00000621676 GNB3P16520 340 aa9.22□□□□□ -0.93
VPS11-208ENST00000621676 NBL1P41271 181 aa9.22□□□□□ -0.93
VPS11-208ENST00000621676 DEFA1P59665 94 aa9.22□□□□□ -0.93
VPS11-208ENST00000621676 DEFA3P59666 94 aa9.22□□□□□ -0.93
VPS11-208ENST00000621676 ENDOGQ14249 297 aaKnown RBP9.22□□□□□ -0.93
VPS11-208ENST00000621676 TMEM255AQ5JRV8 349 aa9.22□□□□□ -0.93
VPS11-208ENST00000621676 MYPOPQ86VE0 399 aaPredicted RBP9.22□□□□□ -0.93
VPS11-208ENST00000621676 SPACA3Q8IXA5 215 aa9.22□□□□□ -0.93
VPS11-208ENST00000621676 SLC22A24Q8N4F4 322 aa9.22□□□□□ -0.93
VPS11-208ENST00000621676 TOMM5Q8N4H5 51 aa9.22□□□□□ -0.93
VPS11-208ENST00000621676 IL17RDQ8NFM7 739 aa9.22□□□□□ -0.93
VPS11-208ENST00000621676 LIPHQ8WWY8 451 aa9.22□□□□□ -0.93
VPS11-208ENST00000621676 FAM3DQ96BQ1 224 aa9.22□□□□□ -0.93
VPS11-208ENST00000621676 SH2D2AQ9NP31 389 aa9.22□□□□□ -0.93
VPS11-208ENST00000621676 G6PC2Q9NQR9 355 aa9.22□□□□□ -0.93
VPS11-208ENST00000621676 CRIM1Q9NZV1 1036 aa9.22□□□□□ -0.93
VPS11-208ENST00000621676 R4GMQ9 66 aa9.22□□□□□ -0.93
VPS11-208ENST00000621676 USP9XQ93008 2570 aaPredicted RBP9.22□□□□□ -0.93
VPS11-208ENST00000621676 GJE1A6NN92 205 aa9.22□□□□□ -0.93
VPS11-208ENST00000621676 C1QTNF9BB2RNN3 333 aa9.22□□□□□ -0.93
VPS11-208ENST00000621676 LILRA1O75019 489 aa9.22□□□□□ -0.93
VPS11-208ENST00000621676 ONECUT2O95948 504 aa9.22□□□□□ -0.93
VPS11-208ENST00000621676 SERPINA3P01011 423 aa9.22□□□□□ -0.93
VPS11-208ENST00000621676 C1QTNF9P0C862 333 aa9.22□□□□□ -0.93
VPS11-208ENST00000621676 ACKR3P25106 362 aa9.22□□□□□ -0.93
VPS11-208ENST00000621676 RFX2P48378 723 aa9.22□□□□□ -0.93
VPS11-208ENST00000621676 PLET1Q6UQ28 207 aa9.22□□□□□ -0.93
VPS11-208ENST00000621676 SIAH3Q8IW03 269 aa9.22□□□□□ -0.93
VPS11-208ENST00000621676 SEH1LQ96EE3 360 aa9.22□□□□□ -0.93
VPS11-208ENST00000621676 PLPPR2Q96GM1 343 aa9.22□□□□□ -0.93
VPS11-208ENST00000621676 NELFAQ9H3P2 528 aa9.22□□□□□ -0.93
VPS11-208ENST00000621676 GPR35Q9HC97 309 aa9.22□□□□□ -0.93
VPS11-208ENST00000621676 UFSP2Q9NUQ7 469 aa9.22□□□□□ -0.93
VPS11-208ENST00000621676 CCDC59Q9P031 241 aaKnown RBP9.22□□□□□ -0.93
VPS11-208ENST00000621676 TRAPPC4Q9Y296 219 aa9.22□□□□□ -0.93
VPS11-208ENST00000621676 TMEM212A6NML5 194 aa9.21□□□□□ -0.93
VPS11-208ENST00000621676 TERTO14746 1132 aaKnown RBP9.21□□□□□ -0.93
VPS11-208ENST00000621676 PLA2G10O15496 165 aa9.21□□□□□ -0.93
VPS11-208ENST00000621676 GMDSO60547 372 aa9.21□□□□□ -0.93
VPS11-208ENST00000621676 MNDAP41218 407 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms