RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 HOXA11P31270 313 aaPredicted RBP4.56□□□□□ -1.68
VPS13D-214ENST00000620676 PIGPP57054 158 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 TMEM31Q5JXX7 168 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 RNF128Q8TEB7 428 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 NXPE3Q969Y0 559 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 ADGRL4Q9HBW9 690 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 PHPT1Q9NRX4 125 aaPredicted RBP4.56□□□□□ -1.68
VPS13D-214ENST00000620676 METTL1Q9UBP6 276 aaKnown RBP4.56□□□□□ -1.68
VPS13D-214ENST00000620676 TMEM14AQ9Y6G1 99 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 A0A087WUU8 490 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 GREM1O60565 184 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 SCGB1C2P0DMR2 95 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 CEBPBP17676 345 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 OR10J1P30954 320 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 SPINT3P49223 89 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 TMEM241Q24JQ0 296 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 OR51F2Q8NH61 342 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 C14orf144Q96I85 54 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 METTL7AQ9H8H3 244 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 SFXN1Q9H9B4 322 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 TECRQ9NZ01 308 aaKnown RBP4.56□□□□□ -1.68
VPS13D-214ENST00000620676 SMIM35A0A1B0GVV1 85 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 TRHRP34981 398 aaPredicted RBP4.56□□□□□ -1.68
VPS13D-214ENST00000620676 ELAVL3Q14576 367 aaKnown RBP4.56□□□□□ -1.68
VPS13D-214ENST00000620676 WBP2NLQ6ICG8 309 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 OR11G2Q8NGC1 345 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 CCNL2Q96S94 520 aaPredicted RBP4.56□□□□□ -1.68
VPS13D-214ENST00000620676 TAAR5O14804 337 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 KLF4O43474 513 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 HBE1P02100 147 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 PVRP15151 417 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 ARHGAP19Q14CB8 494 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 FBXO22Q8NEZ5 403 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 RSPRY1Q96DX4 576 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 ZCCHC4Q9H5U6 513 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 LHX9Q9NQ69 397 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 TMEM150CB9EJG8 249 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 FOXO1Q12778 655 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 ZNF77Q15935 545 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 SPANXN5Q5MJ07 72 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 OR5L2Q8NGL0 311 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 OR4C15Q8NGM1 316 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 GMLQ99445 158 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 TXNRD2Q9NNW7 524 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 OR5AC2Q9NZP5 309 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 SLC35A3Q9Y2D2 325 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 WNT6Q9Y6F9 365 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 A0A1W2PRU2 124 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 ZNF814B7Z6K7 855 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 FCN1O00602 326 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 FUT3P21217 361 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 APLNRP35414 380 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 RANP62826 216 aaKnown RBP4.56□□□□□ -1.68
VPS13D-214ENST00000620676 HENMT1Q5T8I9 393 aaKnown RBP4.56□□□□□ -1.68
VPS13D-214ENST00000620676 NINJ1Q92982 152 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 LYRM2Q9NU23 88 aaPredicted RBP4.56□□□□□ -1.68
VPS13D-214ENST00000620676 A0A1B0GWA3 101 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 FAM24AA6NFZ4 105 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 A8MXK9 166 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 SPATA45Q537H7 98 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 TRMT12Q53H54 448 aaKnown RBP4.56□□□□□ -1.68
VPS13D-214ENST00000620676 FIGLAQ6QHK4 219 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 OPN5Q6U736 354 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 PAQR9Q6ZVX9 377 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 DND1Q8IYX4 353 aaKnown RBP4.56□□□□□ -1.68
VPS13D-214ENST00000620676 OR10A7Q8NGE5 316 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 ZCCHC14Q8WYQ9 949 aaKnown RBP4.56□□□□□ -1.68
VPS13D-214ENST00000620676 NOSIPQ9Y314 301 aaKnown RBP4.56□□□□□ -1.68
VPS13D-214ENST00000620676 SCNN1AP37088 669 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 THBS3P49746 956 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 ELAVL2Q12926 359 aaKnown RBP4.56□□□□□ -1.68
VPS13D-214ENST00000620676 ABLIM2Q6H8Q1 611 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 CAMKVQ8NCB2 501 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 OR4N2Q8NGD1 307 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 RAMP1O60894 148 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 ZNF737O75373 536 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 MT-CO2P00403 227 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 C8AP07357 584 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 OR9A4Q8NGU2 314 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 UBALD1Q8TB05 177 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 TMEM100Q9NV29 134 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 OR8U8P0C7N1 319 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 CD1CP29017 333 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 GABRA2P47869 451 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 NTNG2Q96CW9 530 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 ADOQ96SZ5 270 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 DNAJC4Q9NNZ3 241 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 VIPR2P41587 438 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 EXT1Q16394 746 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 C12orf73Q69YU5 71 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 FUBP3Q96I24 572 aaKnown RBP eCLIP4.55□□□□□ -1.68
VPS13D-214ENST00000620676 ALX4Q9H161 411 aaPredicted RBP4.55□□□□□ -1.68
VPS13D-214ENST00000620676 WDR76Q9H967 626 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 MED17Q9NVC6 651 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 NAT8BQ9UHF3 227 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 GRIFINA4D1Z8 144 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 SOCS5O75159 536 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 C2orf27AQ580R0 203 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 CPEB3Q8NE35 698 aaKnown RBP4.55□□□□□ -1.68
VPS13D-214ENST00000620676 IP6K3Q96PC2 410 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms