RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 DSCAMO60469 2012 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 A0A1B0GVI7 797 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 A0A1W2PQ09 198 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 A0A1W2PR80 420 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 DAPL1A0PJW8 107 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 CIB4A0PJX0 185 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 RIIAD1A6NNX1 92 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 ZNF587BE7ETH6 402 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 PRR23D1E9PI22 279 aaPredicted RBP4.57□□□□□ -1.68
SHMT1-211ENST00000618902 HS3ST1O14792 307 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 LYRM1O43325 122 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 PRAF2O60831 178 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 RAD51DO75771 328 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 UBL3O95164 117 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 NDUFB2O95178 105 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 OR6A2O95222 327 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 SOX14O95416 240 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 SLC2A10O95528 541 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 PPP1R3DO95685 299 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 GPANK1O95872 356 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 TXNDC12O95881 172 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 ECDO95905 644 aaPredicted RBP4.57□□□□□ -1.68
SHMT1-211ENST00000618902 HIST1H2ABP04908 130 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 CD3EP07766 207 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 TACSTD2P09758 323 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 OR2T7P0C7T2 308 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 LIMS3P0CW19 117 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 LIMS4P0CW20 117 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 PRR23D2P0DMB1 279 aaPredicted RBP4.57□□□□□ -1.68
SHMT1-211ENST00000618902 ZNF3P17036 446 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 CELP19835 753 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 M6PRP20645 277 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 APEX1P27695 318 aaKnown RBP4.57□□□□□ -1.68
SHMT1-211ENST00000618902 CDKN2AP42771 156 aaKnown RBP4.57□□□□□ -1.68
SHMT1-211ENST00000618902 RFX2P48378 723 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 CSNK1A1P48729 337 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 PITPNBP48739 271 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 GZMKP49863 264 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 ZNF133P52736 654 aaPredicted RBP4.57□□□□□ -1.68
SHMT1-211ENST00000618902 DSCR9P59020 149 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 GNG2P59768 71 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 AP3S2P59780 193 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 PRPS1P60891 318 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 RPL27P61353 136 aaKnown RBP4.57□□□□□ -1.68
SHMT1-211ENST00000618902 ACTA2P62736 377 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 ACTG2P63267 376 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 ARF1P84077 181 aaKnown RBP4.57□□□□□ -1.68
SHMT1-211ENST00000618902 FABP5Q01469 135 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 PPA1Q15181 289 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 BAK1Q16611 211 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 HIST3H3Q16695 136 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 CEACAM16Q2WEN9 425 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 PGGHGQ32M88 737 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 HIKESHIQ53FT3 197 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 YIF1BQ5BJH7 314 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 FAM209AQ5JX71 171 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 ZNF362Q5T0B9 420 aaPredicted RBP4.57□□□□□ -1.68
SHMT1-211ENST00000618902 NCMAPQ5T1S8 102 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 ATAD3CQ5T2N8 411 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 FAM205BPQ63HN1 556 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 C22orf42Q6IC83 251 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 SLC25A47Q6Q0C1 308 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 SMARCD3Q6STE5 483 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 KLHL24Q6TFL4 600 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 UNQ6126/PRO20091Q6UXV3 157 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 HIST3H2AQ7L7L0 130 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 OAFQ86UD1 273 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 MYPOPQ86VE0 399 aaPredicted RBP4.57□□□□□ -1.68
SHMT1-211ENST00000618902 UBE2J2Q8N2K1 259 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 IQCF1Q8N6M8 205 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 SYT14Q8NB59 555 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 NOXO1Q8NFA2 376 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 OR2T27Q8NH04 317 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 OR4Q3Q8NH05 313 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 ZFAND1Q8TCF1 268 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 TMEM171Q8WVE6 324 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 ZNRF4Q8WWF5 429 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 CAPSLQ8WWF8 208 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 HIST1H2ACQ93077 130 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 FBXW5Q969U6 566 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 MCHR2Q969V1 340 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 RASD2Q96D21 266 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 SLC25A44Q96H78 314 aaPredicted RBP4.57□□□□□ -1.68
SHMT1-211ENST00000618902 HS3ST6Q96QI5 342 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 GPX7Q96SL4 187 aaPredicted RBP4.57□□□□□ -1.68
SHMT1-211ENST00000618902 TEAD3Q99594 435 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 OR52D1Q9H346 318 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 TXNIPQ9H3M7 391 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 TPK1Q9H3S4 243 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 C1orf198Q9H425 327 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 SEC61A2Q9H9S3 476 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 NRIP3Q9NQ35 241 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 POLE4Q9NR33 117 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 CMC2Q9NRP2 79 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 ZNF701Q9NV72 531 aaPredicted RBP4.57□□□□□ -1.68
SHMT1-211ENST00000618902 MCUBQ9NWR8 336 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 GLTPQ9NZD2 209 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 ZNF224Q9NZL3 707 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 POU2F3Q9UKI9 436 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 RNF115Q9Y4L5 304 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms