RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 C15orf40Q8WUR7 153 aa15.22■□□□□ 0.03
PCDHGC3-205ENST00000617641 PHF21AQ96BD5 680 aa15.22■□□□□ 0.03
PCDHGC3-205ENST00000617641 FOXRED1Q96CU9 486 aaPredicted RBP15.22■□□□□ 0.03
PCDHGC3-205ENST00000617641 FOXB1Q99853 325 aa15.22■□□□□ 0.03
PCDHGC3-205ENST00000617641 HRASLSQ9HDD0 168 aa15.22■□□□□ 0.03
PCDHGC3-205ENST00000617641 ZNF221Q9UK13 617 aa15.22■□□□□ 0.03
PCDHGC3-205ENST00000617641 ZNF292O60281 2723 aa15.21■□□□□ 0.03
PCDHGC3-205ENST00000617641 IGKV3D-15A0A087WSY6 115 aa15.21■□□□□ 0.03
PCDHGC3-205ENST00000617641 M0R135 149 aa15.21■□□□□ 0.03
PCDHGC3-205ENST00000617641 LDLRAD4O15165 306 aa15.21■□□□□ 0.03
PCDHGC3-205ENST00000617641 SYNGR4O95473 234 aa15.21■□□□□ 0.03
PCDHGC3-205ENST00000617641 CST2P09228 141 aa15.21■□□□□ 0.03
PCDHGC3-205ENST00000617641 TRAPPC2P0DI81 140 aa15.21■□□□□ 0.03
PCDHGC3-205ENST00000617641 TRAPPC2BP0DI82 140 aa15.21■□□□□ 0.03
PCDHGC3-205ENST00000617641 HLA-DMAP28067 261 aa15.21■□□□□ 0.03
PCDHGC3-205ENST00000617641 OTX1P32242 354 aaPredicted RBP15.21■□□□□ 0.03
PCDHGC3-205ENST00000617641 HYAL4Q2M3T9 481 aa15.21■□□□□ 0.03
PCDHGC3-205ENST00000617641 RIPPLY2Q5TAB7 128 aa15.21■□□□□ 0.03
PCDHGC3-205ENST00000617641 RNF144BQ7Z419 303 aa15.21■□□□□ 0.03
PCDHGC3-205ENST00000617641 HAS2Q92819 552 aa15.21■□□□□ 0.03
PCDHGC3-205ENST00000617641 TMEM45BQ96B21 275 aa15.21■□□□□ 0.03
PCDHGC3-205ENST00000617641 ZNF799Q96GE5 643 aa15.21■□□□□ 0.03
PCDHGC3-205ENST00000617641 SPACA5Q96QH8 159 aa15.21■□□□□ 0.03
PCDHGC3-205ENST00000617641 POU2F3Q9UKI9 436 aa15.21■□□□□ 0.03
PCDHGC3-205ENST00000617641 CNOT1A5YKK6 2376 aaKnown RBP15.21■□□□□ 0.03
PCDHGC3-205ENST00000617641 SGCEO43556 437 aa15.21■□□□□ 0.02
PCDHGC3-205ENST00000617641 GMDSO60547 372 aa15.21■□□□□ 0.02
PCDHGC3-205ENST00000617641 TPPPO94811 219 aa15.21■□□□□ 0.02
PCDHGC3-205ENST00000617641 ECDO95905 644 aaPredicted RBP15.21■□□□□ 0.02
PCDHGC3-205ENST00000617641 CCL11P51671 97 aa15.21■□□□□ 0.02
PCDHGC3-205ENST00000617641 GUCA2AQ02747 115 aa15.21■□□□□ 0.02
PCDHGC3-205ENST00000617641 SLC10A1Q14973 349 aa15.21■□□□□ 0.02
PCDHGC3-205ENST00000617641 RNFT1Q5M7Z0 435 aa15.21■□□□□ 0.02
PCDHGC3-205ENST00000617641 TSPO2Q5TGU0 170 aa15.21■□□□□ 0.02
PCDHGC3-205ENST00000617641 ZNF774Q6NX45 483 aa15.21■□□□□ 0.02
PCDHGC3-205ENST00000617641 IQCF2Q8IXL9 164 aa15.21■□□□□ 0.02
PCDHGC3-205ENST00000617641 OR5AS1Q8N127 324 aa15.21■□□□□ 0.02
PCDHGC3-205ENST00000617641 SLC22A24Q8N4F4 322 aa15.21■□□□□ 0.02
PCDHGC3-205ENST00000617641 OR14K1Q8NGZ2 314 aa15.21■□□□□ 0.02
PCDHGC3-205ENST00000617641 SCMH1Q96GD3 660 aa15.21■□□□□ 0.02
PCDHGC3-205ENST00000617641 BEX2Q9BXY8 128 aa15.21■□□□□ 0.02
PCDHGC3-205ENST00000617641 DEFB127Q9H1M4 99 aa15.21■□□□□ 0.02
PCDHGC3-205ENST00000617641 METTL17Q9H7H0 456 aaPredicted RBP15.21■□□□□ 0.02
PCDHGC3-205ENST00000617641 NUBP2Q9Y5Y2 271 aa15.21■□□□□ 0.02
PCDHGC3-205ENST00000617641 RTTNQ86VV8 2226 aa15.21■□□□□ 0.02
PCDHGC3-205ENST00000617641 ANKRD20A5PA0PJZ0 165 aa15.2■□□□□ 0.02
PCDHGC3-205ENST00000617641 MRPL33O75394 65 aaKnown RBP15.2■□□□□ 0.02
PCDHGC3-205ENST00000617641 GABRA1P14867 456 aa15.2■□□□□ 0.02
PCDHGC3-205ENST00000617641 ZNF32P17041 273 aa15.2■□□□□ 0.02
PCDHGC3-205ENST00000617641 NBL1P41271 181 aa15.2■□□□□ 0.02
PCDHGC3-205ENST00000617641 BTG1P62324 171 aa15.2■□□□□ 0.02
PCDHGC3-205ENST00000617641 RAB35Q15286 201 aa15.2■□□□□ 0.02
PCDHGC3-205ENST00000617641 DNM1P46Q6ZS02 220 aa15.2■□□□□ 0.02
PCDHGC3-205ENST00000617641 TUSC5Q8IXB3 177 aa15.2■□□□□ 0.02
PCDHGC3-205ENST00000617641 PAQR5Q9NXK6 330 aaPredicted RBP15.2■□□□□ 0.02
PCDHGC3-205ENST00000617641 DNAJC13O75165 2243 aa15.2■□□□□ 0.02
PCDHGC3-205ENST00000617641 ASPMQ8IZT6 3477 aa15.2■□□□□ 0.02
PCDHGC3-205ENST00000617641 SYNGR3O43761 229 aa15.2■□□□□ 0.02
PCDHGC3-205ENST00000617641 IGLV3-1P01715 115 aa15.2■□□□□ 0.02
PCDHGC3-205ENST00000617641 NOVA1P51513 510 aaKnown RBP15.2■□□□□ 0.02
PCDHGC3-205ENST00000617641 AP3S2P59780 193 aa15.2■□□□□ 0.02
PCDHGC3-205ENST00000617641 SFRP5Q5T4F7 317 aa15.2■□□□□ 0.02
PCDHGC3-205ENST00000617641 SFRP4Q6FHJ7 346 aaPredicted RBP15.2■□□□□ 0.02
PCDHGC3-205ENST00000617641 UTS2BQ765I0 119 aa15.2■□□□□ 0.02
PCDHGC3-205ENST00000617641 FAM109AQ8N4B1 249 aa15.2■□□□□ 0.02
PCDHGC3-205ENST00000617641 AKR7LQ8NHP1 331 aa15.2■□□□□ 0.02
PCDHGC3-205ENST00000617641 FGFBP3Q8TAT2 258 aa15.2■□□□□ 0.02
PCDHGC3-205ENST00000617641 SPTSSAQ969W0 71 aa15.2■□□□□ 0.02
PCDHGC3-205ENST00000617641 DMRTB1Q96MA1 342 aa15.2■□□□□ 0.02
PCDHGC3-205ENST00000617641 SLCO5A1Q9H2Y9 848 aa15.2■□□□□ 0.02
PCDHGC3-205ENST00000617641 CALHM2Q9HA72 323 aa15.2■□□□□ 0.02
PCDHGC3-205ENST00000617641 MCTS1Q9ULC4 181 aaKnown RBP15.2■□□□□ 0.02
PCDHGC3-205ENST00000617641 CRYGSP22914 178 aa15.19■□□□□ 0.02
PCDHGC3-205ENST00000617641 FAAP20Q6NZ36 180 aa15.19■□□□□ 0.02
PCDHGC3-205ENST00000617641 ZNF627Q7L945 461 aa15.19■□□□□ 0.02
PCDHGC3-205ENST00000617641 FDCSPQ8NFU4 85 aa15.19■□□□□ 0.02
PCDHGC3-205ENST00000617641 PRRG4Q9BZD6 226 aa15.19■□□□□ 0.02
PCDHGC3-205ENST00000617641 LOC400499M0QZD8 3231 aa15.19■□□□□ 0.02
PCDHGC3-205ENST00000617641 A0A0U1RQV5 110 aa15.18■□□□□ 0.02
PCDHGC3-205ENST00000617641 MEIS3P1A6NDR6 274 aa15.18■□□□□ 0.02
PCDHGC3-205ENST00000617641 CDK2AP1O14519 115 aa15.18■□□□□ 0.02
PCDHGC3-205ENST00000617641 GSTT2BP0CG30 244 aa15.18■□□□□ 0.02
PCDHGC3-205ENST00000617641 ZNF93P35789 620 aaPredicted RBP15.18■□□□□ 0.02
PCDHGC3-205ENST00000617641 TNFSF10P50591 281 aa15.18■□□□□ 0.02
PCDHGC3-205ENST00000617641 PMP22Q01453 160 aa15.18■□□□□ 0.02
PCDHGC3-205ENST00000617641 SCRN3Q0VDG4 424 aa15.18■□□□□ 0.02
PCDHGC3-205ENST00000617641 SNAI3Q3KNW1 292 aa15.18■□□□□ 0.02
PCDHGC3-205ENST00000617641 DMRTC1Q5HYR2 192 aa15.18■□□□□ 0.02
PCDHGC3-205ENST00000617641 IGF2-ASQ6U949 168 aa15.18■□□□□ 0.02
PCDHGC3-205ENST00000617641 PGAP1Q75T13 922 aa15.18■□□□□ 0.02
PCDHGC3-205ENST00000617641 SKA3Q8IX90 412 aa15.18■□□□□ 0.02
PCDHGC3-205ENST00000617641 TMEM178AQ8NBL3 297 aa15.18■□□□□ 0.02
PCDHGC3-205ENST00000617641 UQCC2Q9BRT2 126 aa15.18■□□□□ 0.02
PCDHGC3-205ENST00000617641 LDAHQ9H6V9 325 aa15.18■□□□□ 0.02
PCDHGC3-205ENST00000617641 EXO5Q9H790 373 aa15.18■□□□□ 0.02
PCDHGC3-205ENST00000617641 RANGRFQ9HD47 186 aaPredicted RBP15.18■□□□□ 0.02
PCDHGC3-205ENST00000617641 ACKR4Q9NPB9 350 aa15.18■□□□□ 0.02
PCDHGC3-205ENST00000617641 SLC7A10Q9NS82 523 aa15.18■□□□□ 0.02
PCDHGC3-205ENST00000617641 EMC3Q9P0I2 261 aa15.18■□□□□ 0.02
PCDHGC3-205ENST00000617641 H7C417 338 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms