RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 TOLLIPQ9H0E2 274 aa7.41□□□□□ -1.22
GPC6-202ENST00000617456 SLC52A3Q9NQ40 469 aa7.41□□□□□ -1.22
GPC6-202ENST00000617456 PLSCR3Q9NRY6 295 aa7.41□□□□□ -1.22
GPC6-202ENST00000617456 SLC7A10Q9NS82 523 aa7.41□□□□□ -1.22
GPC6-202ENST00000617456 ZNF224Q9NZL3 707 aa7.41□□□□□ -1.22
GPC6-202ENST00000617456 COPZ2Q9P299 210 aa7.41□□□□□ -1.22
GPC6-202ENST00000617456 TMEFF2Q9UIK5 374 aaPredicted RBP7.41□□□□□ -1.22
GPC6-202ENST00000617456 MOKQ9UQ07 419 aa7.41□□□□□ -1.22
GPC6-202ENST00000617456 CHST2Q9Y4C5 530 aa7.41□□□□□ -1.22
GPC6-202ENST00000617456 NUP214P35658 2090 aaPredicted RBP7.4□□□□□ -1.22
GPC6-202ENST00000617456 TRBV5-3A0A0A0MS03 114 aa7.4□□□□□ -1.22
GPC6-202ENST00000617456 ZC3H12DA2A288 527 aaKnown RBP7.4□□□□□ -1.22
GPC6-202ENST00000617456 CCDC182A6NF36 153 aa7.4□□□□□ -1.22
GPC6-202ENST00000617456 A8MXK9 166 aa7.4□□□□□ -1.22
GPC6-202ENST00000617456 ZNF587BE7ETH6 402 aa7.4□□□□□ -1.22
GPC6-202ENST00000617456 H0Y8G0 127 aa7.4□□□□□ -1.22
GPC6-202ENST00000617456 SNAPC5O75971 98 aa7.4□□□□□ -1.22
GPC6-202ENST00000617456 NXPH2O95156 264 aa7.4□□□□□ -1.22
GPC6-202ENST00000617456 C1QCP02747 245 aa7.4□□□□□ -1.22
GPC6-202ENST00000617456 IGFBP1P08833 259 aaPredicted RBP7.4□□□□□ -1.22
GPC6-202ENST00000617456 GKN3PP0CG01 181 aa7.4□□□□□ -1.22
GPC6-202ENST00000617456 ARAFP10398 606 aa7.4□□□□□ -1.22
GPC6-202ENST00000617456 MUC1P15941 1255 aaPredicted RBP7.4□□□□□ -1.22
GPC6-202ENST00000617456 SLC6A2P23975 617 aa7.4□□□□□ -1.22
GPC6-202ENST00000617456 APEX1P27695 318 aaKnown RBP7.4□□□□□ -1.22
GPC6-202ENST00000617456 PSMB6P28072 239 aa7.4□□□□□ -1.22
GPC6-202ENST00000617456 IL2RGP31785 369 aa7.4□□□□□ -1.22
GPC6-202ENST00000617456 TAGLN2P37802 199 aaKnown RBP7.4□□□□□ -1.22
GPC6-202ENST00000617456 RBP2P50120 134 aa7.4□□□□□ -1.22
GPC6-202ENST00000617456 RAB25P57735 213 aa7.4□□□□□ -1.22
GPC6-202ENST00000617456 SLC25A3Q00325 362 aa7.4□□□□□ -1.22
GPC6-202ENST00000617456 CDK6Q00534 326 aa7.4□□□□□ -1.22
GPC6-202ENST00000617456 RAB39AQ14964 217 aa7.4□□□□□ -1.22
GPC6-202ENST00000617456 OR7A5Q15622 319 aa7.4□□□□□ -1.22
GPC6-202ENST00000617456 C2orf76Q3KRA6 126 aa7.4□□□□□ -1.22
GPC6-202ENST00000617456 SLC36A3Q495N2 470 aa7.4□□□□□ -1.22
GPC6-202ENST00000617456 SLC35D3Q5M8T2 416 aa7.4□□□□□ -1.22
GPC6-202ENST00000617456 VHLLQ6RSH7 139 aa7.4□□□□□ -1.22
GPC6-202ENST00000617456 COMMD7Q86VX2 200 aa7.4□□□□□ -1.22
GPC6-202ENST00000617456 LSRQ86X29 649 aaPredicted RBP7.4□□□□□ -1.22
GPC6-202ENST00000617456 RDH10Q8IZV5 341 aa7.4□□□□□ -1.22
GPC6-202ENST00000617456 SPAG16Q8N0X2 631 aa7.4□□□□□ -1.22
GPC6-202ENST00000617456 C3orf56Q8N813 242 aa7.4□□□□□ -1.22
GPC6-202ENST00000617456 TMEM99Q8N816 258 aa7.4□□□□□ -1.22
GPC6-202ENST00000617456 SYT14Q8NB59 555 aa7.4□□□□□ -1.22
GPC6-202ENST00000617456 C19orf18Q8NEA5 215 aa7.4□□□□□ -1.22
GPC6-202ENST00000617456 OR10A7Q8NGE5 316 aa7.4□□□□□ -1.22
GPC6-202ENST00000617456 OR6M1Q8NGM8 313 aa7.4□□□□□ -1.22
GPC6-202ENST00000617456 OR9I1Q8NGQ6 314 aa7.4□□□□□ -1.22
GPC6-202ENST00000617456 MRGPRDQ8TDS7 321 aa7.4□□□□□ -1.22
GPC6-202ENST00000617456 SLC38A4Q969I6 547 aa7.4□□□□□ -1.22
GPC6-202ENST00000617456 RAB24Q969Q5 203 aa7.4□□□□□ -1.22
GPC6-202ENST00000617456 SLC41A3Q96GZ6 507 aa7.4□□□□□ -1.22
GPC6-202ENST00000617456 LRR1Q96L50 414 aa7.4□□□□□ -1.22
GPC6-202ENST00000617456 OXGR1Q96P68 337 aa7.4□□□□□ -1.22
GPC6-202ENST00000617456 PFDN5Q99471 154 aa7.4□□□□□ -1.22
GPC6-202ENST00000617456 EPYCQ99645 322 aa7.4□□□□□ -1.22
GPC6-202ENST00000617456 KATNB1Q9BVA0 655 aa7.4□□□□□ -1.22
GPC6-202ENST00000617456 MYEF2Q9P2K5 600 aaKnown RBP7.4□□□□□ -1.22
GPC6-202ENST00000617456 TESQ9UGI8 421 aaKnown RBP7.4□□□□□ -1.22
GPC6-202ENST00000617456 RIMS3Q9UJD0 308 aa7.4□□□□□ -1.22
GPC6-202ENST00000617456 AURKCQ9UQB9 309 aa7.4□□□□□ -1.22
GPC6-202ENST00000617456 TGP01266 2768 aa7.39□□□□□ -1.23
GPC6-202ENST00000617456 TRAV36DV7A0A075B6V5 113 aa7.39□□□□□ -1.23
GPC6-202ENST00000617456 TEX13CA0A0J9YWL9 993 aa7.39□□□□□ -1.23
GPC6-202ENST00000617456 SAC3D1A6NKF1 404 aa7.39□□□□□ -1.23
GPC6-202ENST00000617456 B2RBV5 119 aa7.39□□□□□ -1.23
GPC6-202ENST00000617456 G3V2T6 193 aa7.39□□□□□ -1.23
GPC6-202ENST00000617456 UBE2CO00762 179 aa7.39□□□□□ -1.23
GPC6-202ENST00000617456 KRT33AO76009 404 aa7.39□□□□□ -1.23
GPC6-202ENST00000617456 ZNF432O94892 652 aa7.39□□□□□ -1.23
GPC6-202ENST00000617456 AKR7A3O95154 331 aa7.39□□□□□ -1.23
GPC6-202ENST00000617456 CTXN2P0C2S0 81 aa7.39□□□□□ -1.23
GPC6-202ENST00000617456 ZNF26P17031 533 aaPredicted RBP7.39□□□□□ -1.23
GPC6-202ENST00000617456 ZNF43P17038 809 aa7.39□□□□□ -1.23
GPC6-202ENST00000617456 MYF6P23409 242 aa7.39□□□□□ -1.23
GPC6-202ENST00000617456 GTF2E2P29084 291 aaKnown RBP7.39□□□□□ -1.23
GPC6-202ENST00000617456 SERPINF1P36955 418 aa7.39□□□□□ -1.23
GPC6-202ENST00000617456 RPS19P39019 145 aaKnown RBP7.39□□□□□ -1.23
GPC6-202ENST00000617456 AQP5P55064 265 aa7.39□□□□□ -1.23
GPC6-202ENST00000617456 ZNF45Q02386 682 aa7.39□□□□□ -1.23
GPC6-202ENST00000617456 NHLH2Q02577 135 aa7.39□□□□□ -1.23
GPC6-202ENST00000617456 EGR4Q05215 589 aa7.39□□□□□ -1.23
GPC6-202ENST00000617456 GUCA2BQ16661 112 aa7.39□□□□□ -1.23
GPC6-202ENST00000617456 HFEQ30201 348 aa7.39□□□□□ -1.23
GPC6-202ENST00000617456 C4orf48Q5BLP8 95 aa7.39□□□□□ -1.23
GPC6-202ENST00000617456 GCNT6Q5T4J0 391 aa7.39□□□□□ -1.23
GPC6-202ENST00000617456 HACD4Q5VWC8 232 aa7.39□□□□□ -1.23
GPC6-202ENST00000617456 ANKRD16Q6P6B7 361 aa7.39□□□□□ -1.23
GPC6-202ENST00000617456 COLCA1Q6ZS62 124 aa7.39□□□□□ -1.23
GPC6-202ENST00000617456 H1FNTQ75WM6 255 aaPredicted RBP7.39□□□□□ -1.23
GPC6-202ENST00000617456 ZNF627Q7L945 461 aa7.39□□□□□ -1.23
GPC6-202ENST00000617456 SMIM15Q7Z3B0 74 aa7.39□□□□□ -1.23
GPC6-202ENST00000617456 SERPINA11Q86U17 422 aa7.39□□□□□ -1.23
GPC6-202ENST00000617456 LRRC17Q8N6Y2 441 aa7.39□□□□□ -1.23
GPC6-202ENST00000617456 LINC01356Q8N9X3 169 aa7.39□□□□□ -1.23
GPC6-202ENST00000617456 CPEB3Q8NE35 698 aaKnown RBP7.39□□□□□ -1.23
GPC6-202ENST00000617456 OR4F15Q8NGB8 312 aa7.39□□□□□ -1.23
GPC6-202ENST00000617456 GCDHQ92947 438 aaPredicted RBP7.39□□□□□ -1.23
GPC6-202ENST00000617456 AURKBQ96GD4 344 aaPredicted RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms