RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 SLC26A5P58743 744 aa13.87□□□□□ -0.19
GPN1-212ENST00000616939 YPEL5P62699 121 aa13.87□□□□□ -0.19
GPN1-212ENST00000616939 ELAVL1Q15717 326 aaKnown RBP13.87□□□□□ -0.19
GPN1-212ENST00000616939 TANGO2Q6ICL3 276 aa13.87□□□□□ -0.19
GPN1-212ENST00000616939 DHRS11Q6UWP2 260 aa13.87□□□□□ -0.19
GPN1-212ENST00000616939 SLC16A13Q7RTY0 426 aa13.87□□□□□ -0.19
GPN1-212ENST00000616939 C19orf47Q8N9M1 422 aaKnown RBP13.87□□□□□ -0.19
GPN1-212ENST00000616939 CPNE2Q96FN4 548 aaPredicted RBP13.87□□□□□ -0.19
GPN1-212ENST00000616939 MAP3K3Q99759 626 aa13.87□□□□□ -0.19
GPN1-212ENST00000616939 SULT4A1Q9BR01 284 aa13.87□□□□□ -0.19
GPN1-212ENST00000616939 TAF9BQ9HBM6 251 aa13.87□□□□□ -0.19
GPN1-212ENST00000616939 SRPK3Q9UPE1 567 aa13.87□□□□□ -0.19
GPN1-212ENST00000616939 FREM3P0C091 2139 aa13.87□□□□□ -0.19
GPN1-212ENST00000616939 CACNA1CQ13936 2221 aa13.86□□□□□ -0.19
GPN1-212ENST00000616939 NPIPB13A6NJU9 1138 aa13.86□□□□□ -0.19
GPN1-212ENST00000616939 NPIPB4C9JG80 1138 aa13.86□□□□□ -0.19
GPN1-212ENST00000616939 P2RY10O00398 339 aa13.86□□□□□ -0.19
GPN1-212ENST00000616939 PLPP3O14495 311 aa13.86□□□□□ -0.19
GPN1-212ENST00000616939 LMX1BO60663 402 aa13.86□□□□□ -0.19
GPN1-212ENST00000616939 CCL5P13501 91 aa13.86□□□□□ -0.19
GPN1-212ENST00000616939 ZNF823P16415 610 aa13.86□□□□□ -0.19
GPN1-212ENST00000616939 GNB3P16520 340 aa13.86□□□□□ -0.19
GPN1-212ENST00000616939 POLR2HP52434 150 aaKnown RBP13.86□□□□□ -0.19
GPN1-212ENST00000616939 SUPT4H1P63272 117 aaKnown RBP13.86□□□□□ -0.19
GPN1-212ENST00000616939 ZP2Q05996 745 aa13.86□□□□□ -0.19
GPN1-212ENST00000616939 OPN5Q6U736 354 aa13.86□□□□□ -0.19
GPN1-212ENST00000616939 SLC29A4Q7RTT9 530 aa13.86□□□□□ -0.19
GPN1-212ENST00000616939 GPBAR1Q8TDU6 330 aa13.86□□□□□ -0.19
GPN1-212ENST00000616939 RNF133Q8WVZ7 376 aa13.86□□□□□ -0.19
GPN1-212ENST00000616939 TRIM43Q96BQ3 446 aaPredicted RBP13.86□□□□□ -0.19
GPN1-212ENST00000616939 FOXN4Q96NZ1 517 aa13.86□□□□□ -0.19
GPN1-212ENST00000616939 CLCC1Q96S66 551 aa13.86□□□□□ -0.19
GPN1-212ENST00000616939 OCSTAMPQ9BR26 566 aa13.86□□□□□ -0.19
GPN1-212ENST00000616939 TINAGQ9UJW2 476 aa13.86□□□□□ -0.19
GPN1-212ENST00000616939 COA3Q9Y2R0 106 aaPredicted RBP13.86□□□□□ -0.19
GPN1-212ENST00000616939 TMEM269A0A1B0GVZ9 245 aa13.85□□□□□ -0.19
GPN1-212ENST00000616939 HKR1P10072 659 aa13.85□□□□□ -0.19
GPN1-212ENST00000616939 SLC37A1P57057 533 aa13.85□□□□□ -0.19
GPN1-212ENST00000616939 FAM3AP98173 230 aa13.85□□□□□ -0.19
GPN1-212ENST00000616939 ZP4Q12836 540 aa13.85□□□□□ -0.19
GPN1-212ENST00000616939 TDGQ13569 410 aa13.85□□□□□ -0.19
GPN1-212ENST00000616939 RAB32Q13637 225 aa13.85□□□□□ -0.19
GPN1-212ENST00000616939 SURF2Q15527 256 aaPredicted RBP13.85□□□□□ -0.19
GPN1-212ENST00000616939 ANKRD55Q3KP44 614 aa13.85□□□□□ -0.19
GPN1-212ENST00000616939 RPL7L1Q6DKI1 246 aaKnown RBP13.85□□□□□ -0.19
GPN1-212ENST00000616939 RBMS3Q6XE24 437 aaKnown RBP13.85□□□□□ -0.19
GPN1-212ENST00000616939 MARCH3Q86UD3 253 aa13.85□□□□□ -0.19
GPN1-212ENST00000616939 C12orf76Q8N812 135 aaPredicted RBP13.85□□□□□ -0.19
GPN1-212ENST00000616939 OR52N4Q8NGI2 321 aa13.85□□□□□ -0.19
GPN1-212ENST00000616939 KLHDC3Q9BQ90 382 aa13.85□□□□□ -0.19
GPN1-212ENST00000616939 RNF208Q9H0X6 261 aa13.85□□□□□ -0.19
GPN1-212ENST00000616939 NXF5Q9H1B4 397 aaKnown RBP13.85□□□□□ -0.19
GPN1-212ENST00000616939 LPAR5Q9H1C0 372 aa13.85□□□□□ -0.19
GPN1-212ENST00000616939 C8orf33Q9H7E9 229 aaPredicted RBP13.85□□□□□ -0.19
GPN1-212ENST00000616939 FAM206AQ9NX38 181 aa13.85□□□□□ -0.19
GPN1-212ENST00000616939 PPP4R1LQ9P1A2 415 aa13.85□□□□□ -0.19
GPN1-212ENST00000616939 OSGIN2Q9Y236 505 aa13.85□□□□□ -0.19
GPN1-212ENST00000616939 STARD10Q9Y365 291 aa13.85□□□□□ -0.19
GPN1-212ENST00000616939 A8MVM7 634 aa13.85□□□□□ -0.19
GPN1-212ENST00000616939 C5orf67F2Z3F1 127 aa13.85□□□□□ -0.19
GPN1-212ENST00000616939 PRAMEF26H0Y7S4 382 aa13.85□□□□□ -0.19
GPN1-212ENST00000616939 ADAP1O75689 374 aa13.85□□□□□ -0.19
GPN1-212ENST00000616939 JTBO76095 146 aa13.85□□□□□ -0.19
GPN1-212ENST00000616939 CTSBP07858 339 aa13.85□□□□□ -0.19
GPN1-212ENST00000616939 HIST1H1DP16402 221 aaKnown RBP13.85□□□□□ -0.19
GPN1-212ENST00000616939 HNRNPA2B1P22626 353 aaKnown RBP13.85□□□□□ -0.19
GPN1-212ENST00000616939 CPT2P23786 658 aa13.85□□□□□ -0.19
GPN1-212ENST00000616939 NTSR1P30989 418 aa13.85□□□□□ -0.19
GPN1-212ENST00000616939 CD80P33681 288 aa13.85□□□□□ -0.19
GPN1-212ENST00000616939 MAS1LP35410 378 aa13.85□□□□□ -0.19
GPN1-212ENST00000616939 GLP1RP43220 463 aa13.85□□□□□ -0.19
GPN1-212ENST00000616939 EMP2P54851 167 aa13.85□□□□□ -0.19
GPN1-212ENST00000616939 DCAF7P61962 342 aa13.85□□□□□ -0.19
GPN1-212ENST00000616939 SRSF5Q13243 272 aaKnown RBP13.85□□□□□ -0.19
GPN1-212ENST00000616939 EIF3IQ13347 325 aaKnown RBP13.85□□□□□ -0.19
GPN1-212ENST00000616939 RBM39Q14498 530 aaKnown RBP13.85□□□□□ -0.19
GPN1-212ENST00000616939 DEFB110Q30KQ9 67 aa13.85□□□□□ -0.19
GPN1-212ENST00000616939 IGSF11Q5DX21 431 aa13.85□□□□□ -0.19
GPN1-212ENST00000616939 C1QL3Q5VWW1 255 aa13.85□□□□□ -0.19
GPN1-212ENST00000616939 OTPQ5XKR4 325 aa13.85□□□□□ -0.19
GPN1-212ENST00000616939 DCXRQ7Z4W1 244 aa13.85□□□□□ -0.19
GPN1-212ENST00000616939 ROBO4Q8WZ75 1007 aa13.85□□□□□ -0.19
GPN1-212ENST00000616939 FGGYQ96C11 551 aa13.85□□□□□ -0.19
GPN1-212ENST00000616939 ZNF285Q96NJ3 590 aa13.85□□□□□ -0.19
GPN1-212ENST00000616939 RTBDNQ9BSG5 229 aaPredicted RBP13.85□□□□□ -0.19
GPN1-212ENST00000616939 CRISPLD2Q9H0B8 497 aa13.85□□□□□ -0.19
GPN1-212ENST00000616939 ARV1Q9H2C2 271 aa13.85□□□□□ -0.19
GPN1-212ENST00000616939 OR2S2Q9NQN1 319 aa13.85□□□□□ -0.19
GPN1-212ENST00000616939 NIT2Q9NQR4 276 aa13.85□□□□□ -0.19
GPN1-212ENST00000616939 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.85□□□□□ -0.19
GPN1-212ENST00000616939 CUTCQ9NTM9 273 aa13.85□□□□□ -0.19
GPN1-212ENST00000616939 TMED7-TICAM2A0A0A6YYA0 188 aa13.84□□□□□ -0.19
GPN1-212ENST00000616939 C17orf105B2RV13 164 aa13.84□□□□□ -0.19
GPN1-212ENST00000616939 ALG1L2C9J202 215 aa13.84□□□□□ -0.19
GPN1-212ENST00000616939 C9JQL5 133 aa13.84□□□□□ -0.19
GPN1-212ENST00000616939 H0Y8X5 98 aa13.84□□□□□ -0.19
GPN1-212ENST00000616939 H2BFMP0C1H6 154 aa13.84□□□□□ -0.19
GPN1-212ENST00000616939 RPS2P15880 293 aaKnown RBP13.84□□□□□ -0.19
GPN1-212ENST00000616939 NME2P22392 152 aa13.84□□□□□ -0.19
GPN1-212ENST00000616939 PPP1CAP62136 330 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms