RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 GABRA1P14867 456 aa17.07■□□□□ 0.32
SPAST-203ENST00000615843 TNFSF4P23510 183 aa17.07■□□□□ 0.32
SPAST-203ENST00000615843 ZDHHC11Q9H8X9 412 aa17.07■□□□□ 0.32
SPAST-203ENST00000615843 OR5V1Q9UGF6 321 aa17.07■□□□□ 0.32
SPAST-203ENST00000615843 PRAMEF25A6NGN4 478 aa17.06■□□□□ 0.32
SPAST-203ENST00000615843 TRAF3IP2O43734 574 aaPredicted RBP17.06■□□□□ 0.32
SPAST-203ENST00000615843 PPP1R1AQ13522 171 aa17.06■□□□□ 0.32
SPAST-203ENST00000615843 OR2AE1Q8NHA4 323 aa17.06■□□□□ 0.32
SPAST-203ENST00000615843 HIF1ANQ9NWT6 349 aa17.06■□□□□ 0.32
SPAST-203ENST00000615843 THAP10Q9P2Z0 257 aaPredicted RBP17.06■□□□□ 0.32
SPAST-203ENST00000615843 MBTPS2O43462 519 aa17.06■□□□□ 0.32
SPAST-203ENST00000615843 HNF1AP20823 631 aa17.06■□□□□ 0.32
SPAST-203ENST00000615843 PNLIPRP3Q17RR3 467 aa17.06■□□□□ 0.32
SPAST-203ENST00000615843 RSPO2Q6UXX9 243 aaPredicted RBP17.06■□□□□ 0.32
SPAST-203ENST00000615843 ARHGEF39Q8N4T4 335 aa17.06■□□□□ 0.32
SPAST-203ENST00000615843 HHIPQ96QV1 700 aa17.06■□□□□ 0.32
SPAST-203ENST00000615843 BOKQ9UMX3 212 aaPredicted RBP17.06■□□□□ 0.32
SPAST-203ENST00000615843 SIGLEC7Q9Y286 467 aa17.06■□□□□ 0.32
SPAST-203ENST00000615843 SCRG1O75711 98 aa17.06■□□□□ 0.32
SPAST-203ENST00000615843 MPC2O95563 127 aa17.06■□□□□ 0.32
SPAST-203ENST00000615843 IQCJQ1A5X6 159 aa17.06■□□□□ 0.32
SPAST-203ENST00000615843 CD300LDQ6UXZ3 194 aa17.06■□□□□ 0.32
SPAST-203ENST00000615843 LAMB1P07942 1786 aa17.06■□□□□ 0.32
SPAST-203ENST00000615843 G3V3Y1 287 aa17.06■□□□□ 0.32
SPAST-203ENST00000615843 DEGS1O15121 323 aa17.06■□□□□ 0.32
SPAST-203ENST00000615843 EFSO43281 561 aa17.06■□□□□ 0.32
SPAST-203ENST00000615843 ARG2P78540 354 aa17.06■□□□□ 0.32
SPAST-203ENST00000615843 MAML2Q8IZL2 1156 aaPredicted RBP17.06■□□□□ 0.32
SPAST-203ENST00000615843 SLC25A43Q8WUT9 341 aaPredicted RBP17.06■□□□□ 0.32
SPAST-203ENST00000615843 TPPP3Q9BW30 176 aa17.06■□□□□ 0.32
SPAST-203ENST00000615843 HS3ST1O14792 307 aa17.05■□□□□ 0.32
SPAST-203ENST00000615843 PNPP00491 289 aa17.05■□□□□ 0.32
SPAST-203ENST00000615843 SULT1A3P0DMM9 295 aa17.05■□□□□ 0.32
SPAST-203ENST00000615843 SULT1A4P0DMN0 295 aa17.05■□□□□ 0.32
SPAST-203ENST00000615843 IAPPP10997 89 aa17.05■□□□□ 0.32
SPAST-203ENST00000615843 TNFRSF4P43489 277 aa17.05■□□□□ 0.32
SPAST-203ENST00000615843 CARD18P57730 90 aa17.05■□□□□ 0.32
SPAST-203ENST00000615843 ELAVL1Q15717 326 aaKnown RBP17.05■□□□□ 0.32
SPAST-203ENST00000615843 KLHDC1Q8N7A1 406 aa17.05■□□□□ 0.32
SPAST-203ENST00000615843 RLN3Q8WXF3 142 aa17.05■□□□□ 0.32
SPAST-203ENST00000615843 TBC1D29Q9UFV1 150 aa17.05■□□□□ 0.32
SPAST-203ENST00000615843 HCFC2Q9Y5Z7 792 aa17.05■□□□□ 0.32
SPAST-203ENST00000615843 ANKRD20A5PA0PJZ0 165 aa17.05■□□□□ 0.32
SPAST-203ENST00000615843 TMEM218A2RU14 115 aa17.05■□□□□ 0.32
SPAST-203ENST00000615843 OR10J4P0C629 311 aa17.05■□□□□ 0.32
SPAST-203ENST00000615843 PXNP49023 591 aaPredicted RBP17.05■□□□□ 0.32
SPAST-203ENST00000615843 B3GNTL1Q67FW5 361 aaPredicted RBP17.05■□□□□ 0.32
SPAST-203ENST00000615843 TMPRSS11FQ6ZWK6 438 aa17.05■□□□□ 0.32
SPAST-203ENST00000615843 STPG2Q8N412 459 aa17.05■□□□□ 0.32
SPAST-203ENST00000615843 TP53I13Q8NBR0 393 aaPredicted RBP17.05■□□□□ 0.32
SPAST-203ENST00000615843 OR11H7Q8NGC8 314 aa17.05■□□□□ 0.32
SPAST-203ENST00000615843 B9D1Q9UPM9 204 aa17.05■□□□□ 0.32
SPAST-203ENST00000615843 CD1CP29017 333 aa17.05■□□□□ 0.32
SPAST-203ENST00000615843 LGALSLQ3ZCW2 172 aaPredicted RBP17.05■□□□□ 0.32
SPAST-203ENST00000615843 DDX60LQ5H9U9 1706 aaKnown RBP17.05■□□□□ 0.32
SPAST-203ENST00000615843 THEM4Q5T1C6 240 aa17.05■□□□□ 0.32
SPAST-203ENST00000615843 GGNBP1Q5YKI7 109 aa17.05■□□□□ 0.32
SPAST-203ENST00000615843 MRM1Q6IN84 353 aaKnown RBP17.05■□□□□ 0.32
SPAST-203ENST00000615843 SMIM15Q7Z3B0 74 aa17.05■□□□□ 0.32
SPAST-203ENST00000615843 C17orf47Q8NEP4 570 aa17.05■□□□□ 0.32
SPAST-203ENST00000615843 NXF2Q9GZY0 626 aaKnown RBP17.05■□□□□ 0.32
SPAST-203ENST00000615843 KCNE1BA0A087WTH5 132 aa17.05■□□□□ 0.32
SPAST-203ENST00000615843 A0A0A6YYD5 115 aa17.05■□□□□ 0.32
SPAST-203ENST00000615843 AP4M1O00189 453 aa17.05■□□□□ 0.32
SPAST-203ENST00000615843 SPP1P10451 314 aa17.05■□□□□ 0.32
SPAST-203ENST00000615843 NOVA1P51513 510 aaKnown RBP17.05■□□□□ 0.32
SPAST-203ENST00000615843 KRTDAPP60985 99 aa17.05■□□□□ 0.32
SPAST-203ENST00000615843 SEZ6L2Q6UXD5 910 aa17.05■□□□□ 0.32
SPAST-203ENST00000615843 OR10P1Q8NGE3 313 aa17.05■□□□□ 0.32
SPAST-203ENST00000615843 SLC39A7Q92504 469 aa17.05■□□□□ 0.32
SPAST-203ENST00000615843 BARHL1Q9BZE3 327 aa17.05■□□□□ 0.32
SPAST-203ENST00000615843 SLC35B3Q9H1N7 401 aa17.05■□□□□ 0.32
SPAST-203ENST00000615843 UCK1Q9HA47 277 aa17.05■□□□□ 0.32
SPAST-203ENST00000615843 ZFPL1O95159 310 aa17.04■□□□□ 0.32
SPAST-203ENST00000615843 SMIM6P0DI80 62 aa17.04■□□□□ 0.32
SPAST-203ENST00000615843 COX5AP20674 150 aa17.04■□□□□ 0.32
SPAST-203ENST00000615843 FPR2P25090 351 aa17.04■□□□□ 0.32
SPAST-203ENST00000615843 SSR4P51571 173 aa17.04■□□□□ 0.32
SPAST-203ENST00000615843 ZNF66Q6ZN08 573 aa17.04■□□□□ 0.32
SPAST-203ENST00000615843 CBLN2Q8IUK8 224 aa17.04■□□□□ 0.32
SPAST-203ENST00000615843 RAB18Q9NP72 206 aa17.04■□□□□ 0.32
SPAST-203ENST00000615843 CA3P07451 260 aa17.04■□□□□ 0.32
SPAST-203ENST00000615843 MPGP29372 298 aa17.04■□□□□ 0.32
SPAST-203ENST00000615843 TPPP2P59282 170 aa17.04■□□□□ 0.32
SPAST-203ENST00000615843 MS4A7Q9GZW8 240 aaPredicted RBP17.04■□□□□ 0.32
SPAST-203ENST00000615843 MICAL3Q7RTP6 2002 aa17.04■□□□□ 0.32
SPAST-203ENST00000615843 TLCD2A6NGC4 264 aa17.04■□□□□ 0.32
SPAST-203ENST00000615843 ZNF79Q15937 498 aa17.04■□□□□ 0.32
SPAST-203ENST00000615843 ACOT6Q3I5F7 207 aaPredicted RBP17.04■□□□□ 0.32
SPAST-203ENST00000615843 NXPE3Q969Y0 559 aa17.04■□□□□ 0.32
SPAST-203ENST00000615843 PARD6AQ9NPB6 346 aa17.04■□□□□ 0.32
SPAST-203ENST00000615843 UQCC1Q9NVA1 299 aa17.04■□□□□ 0.32
SPAST-203ENST00000615843 CT45A6P0DMU7 189 aa17.04■□□□□ 0.32
SPAST-203ENST00000615843 CT45A5P0DMU8 189 aa17.04■□□□□ 0.32
SPAST-203ENST00000615843 CT45A7P0DMV0 189 aa17.04■□□□□ 0.32
SPAST-203ENST00000615843 CT45A8P0DMV1 189 aa17.04■□□□□ 0.32
SPAST-203ENST00000615843 CT45A9P0DMV2 189 aa17.04■□□□□ 0.32
SPAST-203ENST00000615843 CDKN3Q16667 212 aa17.04■□□□□ 0.32
SPAST-203ENST00000615843 TIGITQ495A1 244 aa17.04■□□□□ 0.32
SPAST-203ENST00000615843 CT45A2Q5DJT8 189 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms