RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 SYT9Q86SS6 491 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 MOGAT3Q86VF5 341 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 ZDHHC13Q8IUH4 622 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 GALNT4Q8N4A0 578 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 BOLLQ8N9W6 283 aaKnown RBP4.8□□□□□ -1.64
CPNE3-208ENST00000614678 OR56B2PQ8NGI1 322 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 OR51G2Q8NGK0 314 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 INTS14Q96SY0 518 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 GCM1Q9NP62 436 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 STX18Q9P2W9 335 aaKnown RBP4.8□□□□□ -1.64
CPNE3-208ENST00000614678 GPR160Q9UJ42 338 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 SLC22A13Q9Y226 551 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 SPEF1Q9Y4P9 236 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 LRP12Q9Y561 859 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 IGHV3OR15-7A0A075B7D8 119 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 IDH3BO43837 385 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 ANXA2P07355 339 aaKnown RBP4.8□□□□□ -1.64
CPNE3-208ENST00000614678 SBK2P0C263 348 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 SELLP14151 372 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 OPRL1P41146 370 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 TNFAIP6P98066 277 aaPredicted RBP4.8□□□□□ -1.64
CPNE3-208ENST00000614678 AADACL4Q5VUY2 407 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 SLC16A9Q7RTY1 509 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 ZNF283Q8N7M2 679 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 PIMREGQ9BSJ6 248 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 MS4A5Q9H3V2 200 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 C1orf198Q9H425 327 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 ZNF556Q9HAH1 456 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 ADGRL4Q9HBW9 690 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 DECR2Q9NUI1 292 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 RHBDD3Q9Y3P4 386 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 IGHV3OR16-10A0A075B7F0 116 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 ICMTO60725 284 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 ANXA8P13928 327 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 EGR1P18146 543 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 ALOX5APP20292 161 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 GRK5P34947 590 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 PSMB10P40306 273 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 CRYBB2P43320 205 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 SLC25A1P53007 311 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 LOXL1Q08397 574 aaPredicted RBP4.8□□□□□ -1.64
CPNE3-208ENST00000614678 CEP78Q5JTW2 689 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 C12orf73Q69YU5 71 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 OR5T2Q8NGG2 359 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 OTOSQ8NHW6 89 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 FNDC8Q8TC99 324 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 EME1Q96AY2 570 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 DUS3LQ96G46 650 aaKnown RBP4.8□□□□□ -1.64
CPNE3-208ENST00000614678 CENPNQ96H22 339 aaPredicted RBP4.8□□□□□ -1.64
CPNE3-208ENST00000614678 HDHD2Q9H0R4 259 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 WDR13Q9H1Z4 485 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 TOR3AQ9H497 397 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 S100A14Q9HCY8 104 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 DDX28Q9NUL7 540 aaKnown RBP4.8□□□□□ -1.64
CPNE3-208ENST00000614678 NDRG4Q9ULP0 352 aaKnown RBP4.8□□□□□ -1.64
CPNE3-208ENST00000614678 VWFP04275 2813 aa4.79□□□□□ -1.64
CPNE3-208ENST00000614678 PLSCR5A0PG75 271 aa4.79□□□□□ -1.64
CPNE3-208ENST00000614678 ARRDC5A6NEK1 342 aa4.79□□□□□ -1.64
CPNE3-208ENST00000614678 RPP14O95059 124 aaKnown RBP4.79□□□□□ -1.64
CPNE3-208ENST00000614678 FOSL1P15407 271 aa4.79□□□□□ -1.64
CPNE3-208ENST00000614678 GPR6P46095 362 aaPredicted RBP4.79□□□□□ -1.64
CPNE3-208ENST00000614678 RASSF2P50749 326 aa4.79□□□□□ -1.64
CPNE3-208ENST00000614678 MMP16P51512 607 aa4.79□□□□□ -1.64
CPNE3-208ENST00000614678 FAM3AP98173 230 aa4.79□□□□□ -1.64
CPNE3-208ENST00000614678 OR8B12Q8NGG6 310 aa4.79□□□□□ -1.64
CPNE3-208ENST00000614678 OR1J2Q8NGS2 313 aa4.79□□□□□ -1.64
CPNE3-208ENST00000614678 RNF133Q8WVZ7 376 aa4.79□□□□□ -1.64
CPNE3-208ENST00000614678 DNAJB11Q9UBS4 358 aa4.79□□□□□ -1.64
CPNE3-208ENST00000614678 MYRFQ9Y2G1 1151 aa4.79□□□□□ -1.64
CPNE3-208ENST00000614678 LOC105371242A0A075B767 164 aa4.79□□□□□ -1.64
CPNE3-208ENST00000614678 A0A1W2PQL4 384 aaPredicted RBP4.79□□□□□ -1.64
CPNE3-208ENST00000614678 CD300LBA8K4G0 201 aa4.79□□□□□ -1.64
CPNE3-208ENST00000614678 CD5LO43866 347 aa4.79□□□□□ -1.64
CPNE3-208ENST00000614678 ENTPD6O75354 484 aa4.79□□□□□ -1.64
CPNE3-208ENST00000614678 GRPP07492 148 aa4.79□□□□□ -1.64
CPNE3-208ENST00000614678 GNAO1P09471 354 aa4.79□□□□□ -1.64
CPNE3-208ENST00000614678 BMP4P12644 408 aa4.79□□□□□ -1.64
CPNE3-208ENST00000614678 GIFP27352 417 aa4.79□□□□□ -1.64
CPNE3-208ENST00000614678 PEX2P28328 305 aa4.79□□□□□ -1.64
CPNE3-208ENST00000614678 THBS2P35442 1172 aa4.79□□□□□ -1.64
CPNE3-208ENST00000614678 EVX1P49640 407 aa4.79□□□□□ -1.64
CPNE3-208ENST00000614678 CDK5R2Q13319 367 aa4.79□□□□□ -1.64
CPNE3-208ENST00000614678 SLX4IPQ5VYV7 408 aa4.79□□□□□ -1.64
CPNE3-208ENST00000614678 DNM1P34Q6PK57 102 aa4.79□□□□□ -1.64
CPNE3-208ENST00000614678 METAP1DQ6UB28 335 aaPredicted RBP4.79□□□□□ -1.64
CPNE3-208ENST00000614678 PGAP1Q75T13 922 aa4.79□□□□□ -1.64
CPNE3-208ENST00000614678 SSX8Q7RTT4 187 aa4.79□□□□□ -1.64
CPNE3-208ENST00000614678 C11orf53Q8IXP5 236 aa4.79□□□□□ -1.64
CPNE3-208ENST00000614678 FAM81AQ8TBF8 368 aa4.79□□□□□ -1.64
CPNE3-208ENST00000614678 RDH5Q92781 318 aa4.79□□□□□ -1.64
CPNE3-208ENST00000614678 APOBEC3DQ96AK3 386 aaPredicted RBP4.79□□□□□ -1.64
CPNE3-208ENST00000614678 COQ7Q99807 217 aa4.79□□□□□ -1.64
CPNE3-208ENST00000614678 SLC30A2Q9BRI3 323 aa4.79□□□□□ -1.64
CPNE3-208ENST00000614678 SLC25A19Q9HC21 320 aa4.79□□□□□ -1.64
CPNE3-208ENST00000614678 PCDHGB5Q9Y5G0 923 aa4.79□□□□□ -1.64
CPNE3-208ENST00000614678 A8MV72 311 aaPredicted RBP4.79□□□□□ -1.64
CPNE3-208ENST00000614678 TRAPPC2LH3BP13 241 aa4.79□□□□□ -1.64
CPNE3-208ENST00000614678 CIB2O75838 187 aa4.79□□□□□ -1.64
CPNE3-208ENST00000614678 ATP5HO75947 161 aa4.79□□□□□ -1.64
CPNE3-208ENST00000614678 PTHP01270 115 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms