RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 FAM198AQ9UFP1 575 aa4.52□□□□□ -1.69
VPS13D-213ENST00000613099 RTTNQ86VV8 2226 aa4.52□□□□□ -1.69
VPS13D-213ENST00000613099 LIMS3P0CW19 117 aa4.52□□□□□ -1.69
VPS13D-213ENST00000613099 LIMS4P0CW20 117 aa4.52□□□□□ -1.69
VPS13D-213ENST00000613099 MELKQ14680 651 aa4.52□□□□□ -1.69
VPS13D-213ENST00000613099 NUFIP2Q7Z417 695 aaKnown RBP4.52□□□□□ -1.69
VPS13D-213ENST00000613099 ZCCHC14Q8WYQ9 949 aaKnown RBP4.52□□□□□ -1.69
VPS13D-213ENST00000613099 ARSGQ96EG1 525 aa4.52□□□□□ -1.69
VPS13D-213ENST00000613099 OBP2AQ9NY56 170 aa4.52□□□□□ -1.69
VPS13D-213ENST00000613099 FCN1O00602 326 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 ZNF385BQ569K4 471 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 ZNF787Q6DD87 383 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 ADGRE4PQ86SQ3 457 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 GKN2Q86XP6 184 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 OR11H4Q8NGC9 324 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 ACPTQ9BZG2 426 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 A0A1W2PPC1 479 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 ZNF28P17035 718 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 TMEM128Q5BJH2 165 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 C1orf194Q5T5A4 169 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 TSEN54Q7Z6J9 526 aaKnown RBP4.51□□□□□ -1.69
VPS13D-213ENST00000613099 ETFBKMTQ8IXQ9 262 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 CNIH4Q9P003 139 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 KLF2Q9Y5W3 355 aaPredicted RBP4.51□□□□□ -1.69
VPS13D-213ENST00000613099 CST3P01034 146 aaPredicted RBP4.51□□□□□ -1.69
VPS13D-213ENST00000613099 TFPIP10646 304 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 ACKR3P25106 362 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 DPP4P27487 766 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 AVPR2P30518 371 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 DUSP8Q13202 625 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 XKR7Q5GH72 579 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 CALHM3Q86XJ0 350 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 ESAMQ96AP7 390 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 PSMG3Q9BT73 122 aaPredicted RBP4.51□□□□□ -1.69
VPS13D-213ENST00000613099 PECRQ9BY49 303 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 PRODH2Q9UF12 536 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 SMIM35A0A1B0GVV1 85 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 A8MWP6 167 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 TGM5O43548 720 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 PIAS2O75928 621 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 PPOXP50336 477 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 SMIM21Q3B7S5 101 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 SPATA45Q537H7 98 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 FBLN7Q53RD9 439 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 TMEM182Q6ZP80 229 aaPredicted RBP4.51□□□□□ -1.69
VPS13D-213ENST00000613099 WDR5BQ86VZ2 330 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 SYS1Q8N2H4 156 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 CERS5Q8N5B7 392 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 IL22RA1Q8N6P7 574 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 DGAT2Q96PD7 388 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 GCM1Q9NP62 436 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 ZDHHC3Q9NYG2 299 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 PGA3P0DJD8 388 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 ZNF728P0DKX0 622 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 OR4S1Q8NGB4 309 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 GPA33Q99795 319 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 LRRC37AA6NMS7 1700 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 A0A087WWC5 75 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 GPNMBQ14956 572 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 TESK1Q15569 626 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 HNRNPA1L2Q32P51 320 aaKnown RBP4.51□□□□□ -1.69
VPS13D-213ENST00000613099 LDLRAD2Q5SZI1 272 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 ZNF684Q5T5D7 378 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 CD300LDQ6UXZ3 194 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 TMEM251Q8N6I4 163 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 OR4C16Q8NGL9 310 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 NUBPLQ8TB37 319 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 PLEKHJ1Q9NW61 149 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 CNOT1A5YKK6 2376 aaKnown RBP4.51□□□□□ -1.69
VPS13D-213ENST00000613099 HNRNPA1P09651 372 aaKnown RBP eCLIP4.51□□□□□ -1.69
VPS13D-213ENST00000613099 CD1CP29017 333 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 FBXW12Q6X9E4 464 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 KMT5CQ86Y97 462 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 NAA11Q9BSU3 229 aaPredicted RBP4.51□□□□□ -1.69
VPS13D-213ENST00000613099 ABHD6Q9BV23 337 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 COLCA2A8K830 154 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 GEMIN2O14893 280 aaKnown RBP4.51□□□□□ -1.69
VPS13D-213ENST00000613099 MOSPD3O75425 235 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 TMEM97Q5BJF2 176 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 OLIG1Q8TAK6 271 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 LPPQ93052 612 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 ZMYND19Q96E35 227 aaPredicted RBP4.51□□□□□ -1.69
VPS13D-213ENST00000613099 C1QTNF3Q9BXJ4 246 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 SPANXCQ9NY87 97 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 LRP5O75197 1615 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 SAP18O00422 153 aaKnown RBP4.51□□□□□ -1.69
VPS13D-213ENST00000613099 RPS4Y1P22090 263 aaKnown RBP4.51□□□□□ -1.69
VPS13D-213ENST00000613099 PDX1P52945 283 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 PGGT1BP53609 377 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 LTC4SQ16873 150 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 MS4A13Q5J8X5 152 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 NHLRC1Q6VVB1 395 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 LRRC15Q8TF66 581 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 MS4A6EQ96DS6 147 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 TMEM191AQ9H0A3 160 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 TNFSF18Q9UNG2 199 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 USP3Q9Y6I4 520 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 CLEC18AA5D8T8 446 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 PNMTP11086 282 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 GRPRP30550 384 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms