RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 PRICKLE4Q2TBC4 344 aa11.29□□□□□ -0.6
TNFAIP3-206ENST00000612899 CLLU1Q5K131 121 aa11.29□□□□□ -0.6
TNFAIP3-206ENST00000612899 ZBTB37Q5TC79 503 aa11.29□□□□□ -0.6
TNFAIP3-206ENST00000612899 CST9LP1Q5W188 147 aa11.29□□□□□ -0.6
TNFAIP3-206ENST00000612899 CADM4Q8NFZ8 388 aa11.29□□□□□ -0.6
TNFAIP3-206ENST00000612899 MALSU1Q96EH3 234 aa11.29□□□□□ -0.6
TNFAIP3-206ENST00000612899 CBR3O75828 277 aa11.29□□□□□ -0.6
TNFAIP3-206ENST00000612899 GLSO94925 669 aaPredicted RBP11.29□□□□□ -0.6
TNFAIP3-206ENST00000612899 CT62P0C5K7 136 aa11.29□□□□□ -0.6
TNFAIP3-206ENST00000612899 HOXB1P14653 301 aaPredicted RBP11.29□□□□□ -0.6
TNFAIP3-206ENST00000612899 PCBP3P57721 371 aaKnown RBP11.29□□□□□ -0.6
TNFAIP3-206ENST00000612899 INSL4Q14641 139 aa11.29□□□□□ -0.6
TNFAIP3-206ENST00000612899 OR52H1Q8NGJ2 320 aa11.29□□□□□ -0.6
TNFAIP3-206ENST00000612899 SCARB1Q8WTV0 552 aa11.29□□□□□ -0.6
TNFAIP3-206ENST00000612899 RNF141Q8WVD5 230 aa11.29□□□□□ -0.6
TNFAIP3-206ENST00000612899 FBXW5Q969U6 566 aa11.29□□□□□ -0.6
TNFAIP3-206ENST00000612899 FBXL4Q9UKA2 621 aa11.29□□□□□ -0.6
TNFAIP3-206ENST00000612899 SERTM1A2A2V5 107 aa11.28□□□□□ -0.6
TNFAIP3-206ENST00000612899 CBY3A6NI87 242 aa11.28□□□□□ -0.6
TNFAIP3-206ENST00000612899 HSD17B6O14756 317 aa11.28□□□□□ -0.6
TNFAIP3-206ENST00000612899 NRASP01111 189 aa11.28□□□□□ -0.6
TNFAIP3-206ENST00000612899 LIMS3P0CW19 117 aa11.28□□□□□ -0.6
TNFAIP3-206ENST00000612899 LIMS4P0CW20 117 aa11.28□□□□□ -0.6
TNFAIP3-206ENST00000612899 NFYBP25208 207 aa11.28□□□□□ -0.6
TNFAIP3-206ENST00000612899 ZNF117Q03924 483 aa11.28□□□□□ -0.6
TNFAIP3-206ENST00000612899 HMGN3Q15651 99 aa11.28□□□□□ -0.6
TNFAIP3-206ENST00000612899 CBLN3Q6UW01 205 aa11.28□□□□□ -0.6
TNFAIP3-206ENST00000612899 TMEM200AQ86VY9 491 aa11.28□□□□□ -0.6
TNFAIP3-206ENST00000612899 OR51A2Q8NGJ7 313 aa11.28□□□□□ -0.6
TNFAIP3-206ENST00000612899 C11orf40Q8WZ69 217 aa11.28□□□□□ -0.6
TNFAIP3-206ENST00000612899 GNRHR2Q96P88 292 aa11.28□□□□□ -0.6
TNFAIP3-206ENST00000612899 ABCA3Q99758 1704 aa11.28□□□□□ -0.6
TNFAIP3-206ENST00000612899 IGHV1OR15-9A0A0B4J2B8 117 aa11.28□□□□□ -0.6
TNFAIP3-206ENST00000612899 KIR2DS1A0A191URI9 304 aa11.28□□□□□ -0.6
TNFAIP3-206ENST00000612899 TMEM200CA6NKL6 621 aa11.28□□□□□ -0.6
TNFAIP3-206ENST00000612899 GNB3P16520 340 aa11.28□□□□□ -0.6
TNFAIP3-206ENST00000612899 KIR2DS4P43632 304 aa11.28□□□□□ -0.6
TNFAIP3-206ENST00000612899 HBG1P69891 147 aa11.28□□□□□ -0.6
TNFAIP3-206ENST00000612899 HBG2P69892 147 aa11.28□□□□□ -0.6
TNFAIP3-206ENST00000612899 KIR2DS1Q14954 304 aa11.28□□□□□ -0.6
TNFAIP3-206ENST00000612899 HIST2H3PS2Q5TEC6 136 aa11.28□□□□□ -0.6
TNFAIP3-206ENST00000612899 LAIR1Q6GTX8 287 aa11.28□□□□□ -0.6
TNFAIP3-206ENST00000612899 THSD4Q6ZMP0 1018 aa11.28□□□□□ -0.6
TNFAIP3-206ENST00000612899 TCTE3Q8IZS6 198 aa11.28□□□□□ -0.6
TNFAIP3-206ENST00000612899 LINC00518Q8N0U6 118 aa11.28□□□□□ -0.6
TNFAIP3-206ENST00000612899 H1FXQ92522 213 aaKnown RBP11.28□□□□□ -0.6
TNFAIP3-206ENST00000612899 MSI2Q96DH6 328 aaKnown RBP11.28□□□□□ -0.6
TNFAIP3-206ENST00000612899 LRRC3BQ96PB8 259 aa11.28□□□□□ -0.6
TNFAIP3-206ENST00000612899 GABRG3Q99928 467 aa11.28□□□□□ -0.6
TNFAIP3-206ENST00000612899 ZNF2Q9BSG1 426 aaPredicted RBP11.28□□□□□ -0.6
TNFAIP3-206ENST00000612899 RNF32Q9H0A6 362 aa11.28□□□□□ -0.6
TNFAIP3-206ENST00000612899 PLEKHB1Q9UF11 243 aaPredicted RBP11.28□□□□□ -0.6
TNFAIP3-206ENST00000612899 K7EQS6 105 aa11.28□□□□□ -0.6
TNFAIP3-206ENST00000612899 ZNF121P58317 390 aaPredicted RBP11.28□□□□□ -0.6
TNFAIP3-206ENST00000612899 ZNF468Q5VIY5 522 aaPredicted RBP11.28□□□□□ -0.6
TNFAIP3-206ENST00000612899 ADGRG3Q86Y34 549 aa11.28□□□□□ -0.6
TNFAIP3-206ENST00000612899 OR2I1PQ8NGU4 316 aa11.28□□□□□ -0.6
TNFAIP3-206ENST00000612899 LOC105371267A0A1B0GV96 52 aa11.28□□□□□ -0.6
TNFAIP3-206ENST00000612899 OR6C6A6NF89 314 aa11.28□□□□□ -0.6
TNFAIP3-206ENST00000612899 ENSAO43768 121 aaKnown RBP11.28□□□□□ -0.6
TNFAIP3-206ENST00000612899 C10orf111Q8N326 155 aa11.28□□□□□ -0.6
TNFAIP3-206ENST00000612899 OR10G3Q8NGC4 313 aa11.28□□□□□ -0.6
TNFAIP3-206ENST00000612899 OR51A4Q8NGJ6 313 aa11.28□□□□□ -0.6
TNFAIP3-206ENST00000612899 IP6K3Q96PC2 410 aa11.28□□□□□ -0.6
TNFAIP3-206ENST00000612899 EDEM2Q9BV94 578 aa11.28□□□□□ -0.6
TNFAIP3-206ENST00000612899 SPACA1Q9HBV2 294 aa11.28□□□□□ -0.6
TNFAIP3-206ENST00000612899 DNAJB12Q9NXW2 375 aaKnown RBP11.28□□□□□ -0.6
TNFAIP3-206ENST00000612899 CCL27Q9Y4X3 112 aa11.28□□□□□ -0.6
TNFAIP3-206ENST00000612899 A0A0A6YYJ9 748 aa11.27□□□□□ -0.6
TNFAIP3-206ENST00000612899 ZNF705FA8MVS1 300 aaPredicted RBP11.27□□□□□ -0.6
TNFAIP3-206ENST00000612899 TCAPO15273 167 aa11.27□□□□□ -0.6
TNFAIP3-206ENST00000612899 ZNF705DP0CH99 300 aaPredicted RBP11.27□□□□□ -0.6
TNFAIP3-206ENST00000612899 ZNF705BP0CI00 300 aaPredicted RBP11.27□□□□□ -0.6
TNFAIP3-206ENST00000612899 AGFG1P52594 562 aaKnown RBP11.27□□□□□ -0.6
TNFAIP3-206ENST00000612899 FMODQ06828 376 aa11.27□□□□□ -0.6
TNFAIP3-206ENST00000612899 IL10RAQ13651 578 aa11.27□□□□□ -0.6
TNFAIP3-206ENST00000612899 ETFRF1Q6IPR1 90 aa11.27□□□□□ -0.6
TNFAIP3-206ENST00000612899 SLC38A9Q8NBW4 561 aa11.27□□□□□ -0.6
TNFAIP3-206ENST00000612899 PELI1Q96FA3 418 aa11.27□□□□□ -0.6
TNFAIP3-206ENST00000612899 PARP12Q9H0J9 701 aaKnown RBP11.27□□□□□ -0.6
TNFAIP3-206ENST00000612899 CDC42EP2O14613 210 aa11.27□□□□□ -0.61
TNFAIP3-206ENST00000612899 PPP1R2P9O14990 202 aa11.27□□□□□ -0.61
TNFAIP3-206ENST00000612899 SPINT2O43291 252 aa11.27□□□□□ -0.61
TNFAIP3-206ENST00000612899 WDR1O75083 606 aa11.27□□□□□ -0.61
TNFAIP3-206ENST00000612899 WNT11O96014 354 aa11.27□□□□□ -0.61
TNFAIP3-206ENST00000612899 FAM157BP0CG42 384 aa11.27□□□□□ -0.61
TNFAIP3-206ENST00000612899 HNF1AP20823 631 aa11.27□□□□□ -0.61
TNFAIP3-206ENST00000612899 MESP2Q0VG99 397 aa11.27□□□□□ -0.61
TNFAIP3-206ENST00000612899 PDZK1IP1Q13113 114 aa11.27□□□□□ -0.61
TNFAIP3-206ENST00000612899 MYBPHQ13203 477 aa11.27□□□□□ -0.61
TNFAIP3-206ENST00000612899 CEACAM16Q2WEN9 425 aa11.27□□□□□ -0.61
TNFAIP3-206ENST00000612899 TFAP2EQ6VUC0 442 aa11.27□□□□□ -0.61
TNFAIP3-206ENST00000612899 MAFAQ8NHW3 353 aaPredicted RBP11.27□□□□□ -0.61
TNFAIP3-206ENST00000612899 OTOSQ8NHW6 89 aa11.27□□□□□ -0.61
TNFAIP3-206ENST00000612899 OR8B4Q96RC9 309 aa11.27□□□□□ -0.61
TNFAIP3-206ENST00000612899 SUCNR1Q9BXA5 334 aa11.27□□□□□ -0.61
TNFAIP3-206ENST00000612899 HEYLQ9NQ87 328 aaPredicted RBP11.27□□□□□ -0.61
TNFAIP3-206ENST00000612899 WNT16Q9UBV4 365 aa11.27□□□□□ -0.61
TNFAIP3-206ENST00000612899 THSD7AQ9UPZ6 1657 aa11.27□□□□□ -0.61
TNFAIP3-206ENST00000612899 COL24A1Q17RW2 1714 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms