RNA–Protein interactions for RNA: ENST00000609574.1

HDDC2-210, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 607 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-210ENST00000609574 HIST2H3PS2Q5TEC6 136 aa13.07□□□□□ -0.32
HDDC2-210ENST00000609574 HIST2H2BDQ6DRA6 164 aa13.07□□□□□ -0.32
HDDC2-210ENST00000609574 CORO6Q6QEF8 472 aa13.07□□□□□ -0.32
HDDC2-210ENST00000609574 TBPL2Q6SJ96 375 aa13.07□□□□□ -0.32
HDDC2-210ENST00000609574 DPY19L2P2Q6ZN68 376 aa13.07□□□□□ -0.32
HDDC2-210ENST00000609574 COLCA1Q6ZS62 124 aa13.07□□□□□ -0.32
HDDC2-210ENST00000609574 Q6ZSV7 163 aa13.07□□□□□ -0.32
HDDC2-210ENST00000609574 HIST2H3AQ71DI3 136 aa13.07□□□□□ -0.32
HDDC2-210ENST00000609574 ST8SIA4Q92187 359 aa13.07□□□□□ -0.32
HDDC2-210ENST00000609574 SPTSSAQ969W0 71 aa13.07□□□□□ -0.32
HDDC2-210ENST00000609574 ADAT1Q9BUB4 502 aaKnown RBP13.07□□□□□ -0.32
HDDC2-210ENST00000609574 TMEM120AQ9BXJ8 343 aa13.07□□□□□ -0.32
HDDC2-210ENST00000609574 SIRPDQ9H106 197 aa13.07□□□□□ -0.32
HDDC2-210ENST00000609574 RASSF4Q9H2L5 321 aa13.07□□□□□ -0.32
HDDC2-210ENST00000609574 ANKRD19PQ9H560 264 aa13.07□□□□□ -0.32
HDDC2-210ENST00000609574 SRA1Q9HD15 236 aaKnown RBP13.07□□□□□ -0.32
HDDC2-210ENST00000609574 C1orf123Q9NWV4 160 aa13.07□□□□□ -0.32
HDDC2-210ENST00000609574 ONECUT1Q9UBC0 465 aa13.07□□□□□ -0.32
HDDC2-210ENST00000609574 FAM32AQ9Y421 112 aaKnown RBP13.07□□□□□ -0.32
HDDC2-210ENST00000609574 DVL1O14640 695 aa13.06□□□□□ -0.32
HDDC2-210ENST00000609574 PIN1P1O15428 100 aa13.06□□□□□ -0.32
HDDC2-210ENST00000609574 HLA-DQA2P01906 255 aa13.06□□□□□ -0.32
HDDC2-210ENST00000609574 GYPAP02724 150 aa13.06□□□□□ -0.32
HDDC2-210ENST00000609574 GRPP07492 148 aa13.06□□□□□ -0.32
HDDC2-210ENST00000609574 ACSM4P0C7M7 580 aa13.06□□□□□ -0.32
HDDC2-210ENST00000609574 GRK5P34947 590 aa13.06□□□□□ -0.32
HDDC2-210ENST00000609574 MDH1P40925 334 aaKnown RBP13.06□□□□□ -0.32
HDDC2-210ENST00000609574 COX10Q12887 443 aa13.06□□□□□ -0.32
HDDC2-210ENST00000609574 MEP1BQ16820 701 aa13.06□□□□□ -0.32
HDDC2-210ENST00000609574 OR5R1Q8NH85 324 aa13.06□□□□□ -0.32
HDDC2-210ENST00000609574 FAM46AQ96IP4 442 aaKnown RBP13.06□□□□□ -0.32
HDDC2-210ENST00000609574 ATF6BQ99941 703 aa13.06□□□□□ -0.32
HDDC2-210ENST00000609574 NSRP1Q9H0G5 558 aaKnown RBP13.06□□□□□ -0.32
HDDC2-210ENST00000609574 NRIP3Q9NQ35 241 aa13.06□□□□□ -0.32
HDDC2-210ENST00000609574 C14orf119Q9NWQ9 140 aa13.06□□□□□ -0.32
HDDC2-210ENST00000609574 CTSZQ9UBR2 303 aa13.06□□□□□ -0.32
HDDC2-210ENST00000609574 VPREB3Q9UKI3 123 aa13.06□□□□□ -0.32
HDDC2-210ENST00000609574 LHFPL6Q9Y693 200 aa13.06□□□□□ -0.32
HDDC2-210ENST00000609574 CD300LBA8K4G0 201 aa13.05□□□□□ -0.32
HDDC2-210ENST00000609574 OR10H3O60404 316 aa13.05□□□□□ -0.32
HDDC2-210ENST00000609574 PTP4A3O75365 173 aa13.05□□□□□ -0.32
HDDC2-210ENST00000609574 TSPAN9O75954 239 aa13.05□□□□□ -0.32
HDDC2-210ENST00000609574 EGR3Q06889 387 aa13.05□□□□□ -0.32
HDDC2-210ENST00000609574 TRAP1Q12931 704 aaKnown RBP13.05□□□□□ -0.32
HDDC2-210ENST00000609574 VMO1Q7Z5L0 202 aa13.05□□□□□ -0.32
HDDC2-210ENST00000609574 TSEN54Q7Z6J9 526 aaKnown RBP13.05□□□□□ -0.32
HDDC2-210ENST00000609574 VTCN1Q7Z7D3 282 aa13.05□□□□□ -0.32
HDDC2-210ENST00000609574 DTX3Q8N9I9 347 aa13.05□□□□□ -0.32
HDDC2-210ENST00000609574 ATP6V1G3Q96LB4 118 aa13.05□□□□□ -0.32
HDDC2-210ENST00000609574 B9D1Q9UPM9 204 aa13.05□□□□□ -0.32
HDDC2-210ENST00000609574 SNX13Q9Y5W8 968 aa13.05□□□□□ -0.32
HDDC2-210ENST00000609574 LOC100653049A0A140TA62 436 aa13.04□□□□□ -0.32
HDDC2-210ENST00000609574 UNC119BA6NIH7 251 aa13.04□□□□□ -0.32
HDDC2-210ENST00000609574 FFAR1O14842 300 aa13.04□□□□□ -0.32
HDDC2-210ENST00000609574 KRT34O76011 436 aa13.04□□□□□ -0.32
HDDC2-210ENST00000609574 TROVE2P10155 538 aaKnown RBP eCLIP13.04□□□□□ -0.32
HDDC2-210ENST00000609574 ZNF823P16415 610 aa13.04□□□□□ -0.32
HDDC2-210ENST00000609574 GABRA5P31644 462 aa13.04□□□□□ -0.32
HDDC2-210ENST00000609574 CDKN2AP42771 156 aaKnown RBP13.04□□□□□ -0.32
HDDC2-210ENST00000609574 PRSS12P56730 875 aa13.04□□□□□ -0.32
HDDC2-210ENST00000609574 HERPUD1Q15011 391 aa13.04□□□□□ -0.32
HDDC2-210ENST00000609574 FAM189A2Q15884 450 aa13.04□□□□□ -0.32
HDDC2-210ENST00000609574 MICBQ29980 383 aa13.04□□□□□ -0.32
HDDC2-210ENST00000609574 C11orf88Q6PI97 169 aa13.04□□□□□ -0.32
HDDC2-210ENST00000609574 SLC36A1Q7Z2H8 476 aa13.04□□□□□ -0.32
HDDC2-210ENST00000609574 PPP1R14AQ96A00 147 aa13.04□□□□□ -0.32
HDDC2-210ENST00000609574 RSRC1Q96IZ7 334 aaKnown RBP13.04□□□□□ -0.32
HDDC2-210ENST00000609574 DMRTB1Q96MA1 342 aa13.04□□□□□ -0.32
HDDC2-210ENST00000609574 ERMAPQ96PL5 475 aaPredicted RBP13.04□□□□□ -0.32
HDDC2-210ENST00000609574 GPX7Q96SL4 187 aaPredicted RBP13.04□□□□□ -0.32
HDDC2-210ENST00000609574 MRPL15Q9P015 296 aaKnown RBP13.04□□□□□ -0.32
HDDC2-210ENST00000609574 RPUSD1Q9UJJ7 312 aaKnown RBP13.04□□□□□ -0.32
HDDC2-210ENST00000609574 SIGLEC7Q9Y286 467 aa13.04□□□□□ -0.32
HDDC2-210ENST00000609574 G3V4G9 280 aa13.03□□□□□ -0.32
HDDC2-210ENST00000609574 IMPA2O14732 288 aa13.03□□□□□ -0.32
HDDC2-210ENST00000609574 GPR37O15354 613 aa13.03□□□□□ -0.32
HDDC2-210ENST00000609574 NDUFB3O43676 98 aa13.03□□□□□ -0.32
HDDC2-210ENST00000609574 TXNDC12O95881 172 aa13.03□□□□□ -0.32
HDDC2-210ENST00000609574 OPN1MWP04001 364 aa13.03□□□□□ -0.32
HDDC2-210ENST00000609574 H1F0P07305 194 aaKnown RBP13.03□□□□□ -0.32
HDDC2-210ENST00000609574 OPN1MW2P0DN77 364 aa13.03□□□□□ -0.32
HDDC2-210ENST00000609574 OPN1MW3P0DN78 364 aa13.03□□□□□ -0.32
HDDC2-210ENST00000609574 ZNF26P17031 533 aaPredicted RBP13.03□□□□□ -0.32
HDDC2-210ENST00000609574 FUT4P22083 530 aa13.03□□□□□ -0.32
HDDC2-210ENST00000609574 NOS3P29474 1203 aa13.03□□□□□ -0.32
HDDC2-210ENST00000609574 FGD3Q5JSP0 725 aa13.03□□□□□ -0.32
HDDC2-210ENST00000609574 SLC18B1Q6NT16 456 aa13.03□□□□□ -0.32
HDDC2-210ENST00000609574 SMARCD3Q6STE5 483 aa13.03□□□□□ -0.32
HDDC2-210ENST00000609574 PTCHD4Q6ZW05 846 aa13.03□□□□□ -0.32
HDDC2-210ENST00000609574 ARPINQ7Z6K5 226 aa13.03□□□□□ -0.32
HDDC2-210ENST00000609574 LINC00346Q8IVM7 164 aa13.03□□□□□ -0.32
HDDC2-210ENST00000609574 PIP4P2Q8N4L2 257 aa13.03□□□□□ -0.32
HDDC2-210ENST00000609574 OR4C15Q8NGM1 316 aa13.03□□□□□ -0.32
HDDC2-210ENST00000609574 OR8S1Q8NH09 359 aa13.03□□□□□ -0.32
HDDC2-210ENST00000609574 TSSK2Q96PF2 358 aa13.03□□□□□ -0.32
HDDC2-210ENST00000609574 FAM234AQ9H0X4 552 aa13.03□□□□□ -0.32
HDDC2-210ENST00000609574 SMURF1Q9HCE7 757 aa13.03□□□□□ -0.32
HDDC2-210ENST00000609574 KAAG1Q9UBP8 84 aa13.03□□□□□ -0.32
HDDC2-210ENST00000609574 M0R135 149 aa13.02□□□□□ -0.33
HDDC2-210ENST00000609574 FXYD1O00168 92 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms