RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 SPRNQ5BIV9 151 aa14.29□□□□□ -0.12
TRIM28-215ENST00000601150 CYB5R2Q6BCY4 276 aa14.29□□□□□ -0.12
TRIM28-215ENST00000601150 OR2AE1Q8NHA4 323 aa14.29□□□□□ -0.12
TRIM28-215ENST00000601150 CNN2Q99439 309 aaKnown RBP14.29□□□□□ -0.12
TRIM28-215ENST00000601150 REPIN1Q9BWE0 567 aaKnown RBP14.29□□□□□ -0.12
TRIM28-215ENST00000601150 OPA3Q9H6K4 179 aa14.29□□□□□ -0.12
TRIM28-215ENST00000601150 TMEM100Q9NV29 134 aa14.29□□□□□ -0.12
TRIM28-215ENST00000601150 DNAJC27Q9NZQ0 273 aa14.29□□□□□ -0.12
TRIM28-215ENST00000601150 IL19Q9UHD0 177 aa14.29□□□□□ -0.12
TRIM28-215ENST00000601150 CACNG2Q9Y698 323 aa14.29□□□□□ -0.12
TRIM28-215ENST00000601150 TMEM14AQ9Y6G1 99 aa14.29□□□□□ -0.12
TRIM28-215ENST00000601150 GGT3PA6NGU5 568 aa14.28□□□□□ -0.12
TRIM28-215ENST00000601150 CLDN25C9JDP6 229 aa14.28□□□□□ -0.12
TRIM28-215ENST00000601150 TBX1O43435 398 aa14.28□□□□□ -0.12
TRIM28-215ENST00000601150 TNFRSF1AP19438 455 aa14.28□□□□□ -0.12
TRIM28-215ENST00000601150 ANOS1P23352 680 aa14.28□□□□□ -0.12
TRIM28-215ENST00000601150 HIVEP2P31629 2446 aa14.28□□□□□ -0.12
TRIM28-215ENST00000601150 HCCSP53701 268 aa14.28□□□□□ -0.12
TRIM28-215ENST00000601150 ZNF121P58317 390 aaPredicted RBP14.28□□□□□ -0.12
TRIM28-215ENST00000601150 CDC42P60953 191 aa14.28□□□□□ -0.12
TRIM28-215ENST00000601150 SLC3A1Q07837 685 aa14.28□□□□□ -0.12
TRIM28-215ENST00000601150 ZIK1Q3SY52 487 aaPredicted RBP14.28□□□□□ -0.12
TRIM28-215ENST00000601150 KCTD18Q6PI47 426 aaPredicted RBP14.28□□□□□ -0.12
TRIM28-215ENST00000601150 FAM57BQ71RH2 274 aa14.28□□□□□ -0.12
TRIM28-215ENST00000601150 KRT77Q7Z794 578 aa14.28□□□□□ -0.12
TRIM28-215ENST00000601150 OR52H1Q8NGJ2 320 aa14.28□□□□□ -0.12
TRIM28-215ENST00000601150 OR8J1Q8NGP2 316 aa14.28□□□□□ -0.12
TRIM28-215ENST00000601150 SPRYD4Q8WW59 207 aaPredicted RBP14.28□□□□□ -0.12
TRIM28-215ENST00000601150 CCL17Q92583 94 aa14.28□□□□□ -0.12
TRIM28-215ENST00000601150 HPS1Q92902 700 aa14.28□□□□□ -0.12
TRIM28-215ENST00000601150 HRASLS5Q96KN8 279 aa14.28□□□□□ -0.12
TRIM28-215ENST00000601150 NIPAL2Q9H841 368 aa14.28□□□□□ -0.12
TRIM28-215ENST00000601150 YAE1D1Q9NRH1 226 aa14.28□□□□□ -0.12
TRIM28-215ENST00000601150 IMPAD1Q9NX62 359 aa14.28□□□□□ -0.12
TRIM28-215ENST00000601150 HAO2Q9NYQ3 351 aa14.28□□□□□ -0.12
TRIM28-215ENST00000601150 A0A1B0GWJ7 208 aa14.27□□□□□ -0.13
TRIM28-215ENST00000601150 CD300LBA8K4G0 201 aa14.27□□□□□ -0.13
TRIM28-215ENST00000601150 GABPB1Q06547 395 aaPredicted RBP14.27□□□□□ -0.13
TRIM28-215ENST00000601150 TIGD6Q17RP2 521 aa14.27□□□□□ -0.13
TRIM28-215ENST00000601150 C6orf52Q5T4I8 152 aa14.27□□□□□ -0.13
TRIM28-215ENST00000601150 LRRN1Q6UXK5 716 aa14.27□□□□□ -0.13
TRIM28-215ENST00000601150 ZBTB49Q6ZSB9 765 aa14.27□□□□□ -0.13
TRIM28-215ENST00000601150 PRSS45Q7RTY3 260 aa14.27□□□□□ -0.13
TRIM28-215ENST00000601150 OR10AD1Q8NGE0 317 aa14.27□□□□□ -0.13
TRIM28-215ENST00000601150 FAM81AQ8TBF8 368 aa14.27□□□□□ -0.13
TRIM28-215ENST00000601150 ITLN1Q8WWA0 313 aa14.27□□□□□ -0.13
TRIM28-215ENST00000601150 ASB17Q8WXJ9 295 aa14.27□□□□□ -0.13
TRIM28-215ENST00000601150 RAB1CQ92928 201 aa14.27□□□□□ -0.13
TRIM28-215ENST00000601150 SPSB4Q96A44 273 aa14.27□□□□□ -0.13
TRIM28-215ENST00000601150 EME1Q96AY2 570 aa14.27□□□□□ -0.13
TRIM28-215ENST00000601150 TIMD4Q96H15 378 aa14.27□□□□□ -0.13
TRIM28-215ENST00000601150 PGAM5Q96HS1 289 aa14.27□□□□□ -0.13
TRIM28-215ENST00000601150 OR2V2Q96R30 315 aa14.27□□□□□ -0.13
TRIM28-215ENST00000601150 MNTQ99583 582 aa14.27□□□□□ -0.13
TRIM28-215ENST00000601150 ADGRL4Q9HBW9 690 aa14.27□□□□□ -0.13
TRIM28-215ENST00000601150 BRD7Q9NPI1 651 aa14.27□□□□□ -0.13
TRIM28-215ENST00000601150 TREM2Q9NZC2 230 aa14.27□□□□□ -0.13
TRIM28-215ENST00000601150 WARS2Q9UGM6 360 aaKnown RBP14.27□□□□□ -0.13
TRIM28-215ENST00000601150 NF1P21359 2839 aa14.27□□□□□ -0.13
TRIM28-215ENST00000601150 ABCA2Q9BZC7 2435 aa14.26□□□□□ -0.13
TRIM28-215ENST00000601150 INAFM1C9JVW0 142 aa14.26□□□□□ -0.13
TRIM28-215ENST00000601150 H0YL77 283 aa14.26□□□□□ -0.13
TRIM28-215ENST00000601150 MLNRO43193 412 aa14.26□□□□□ -0.13
TRIM28-215ENST00000601150 CFL1P23528 166 aaKnown RBP14.26□□□□□ -0.13
TRIM28-215ENST00000601150 HTR1FP30939 366 aa14.26□□□□□ -0.13
TRIM28-215ENST00000601150 IL2RGP31785 369 aa14.26□□□□□ -0.13
TRIM28-215ENST00000601150 SRP9P49458 86 aaKnown RBP14.26□□□□□ -0.13
TRIM28-215ENST00000601150 PSMA6P60900 246 aaKnown RBP14.26□□□□□ -0.13
TRIM28-215ENST00000601150 MVKQ03426 396 aa14.26□□□□□ -0.13
TRIM28-215ENST00000601150 ZSCAN26Q16670 478 aa14.26□□□□□ -0.13
TRIM28-215ENST00000601150 DEGS2Q6QHC5 323 aa14.26□□□□□ -0.13
TRIM28-215ENST00000601150 SLC35F2Q8IXU6 374 aa14.26□□□□□ -0.13
TRIM28-215ENST00000601150 TRUB1Q8WWH5 349 aaKnown RBP14.26□□□□□ -0.13
TRIM28-215ENST00000601150 RFKQ969G6 155 aa14.26□□□□□ -0.13
TRIM28-215ENST00000601150 SGK3Q96BR1 496 aa14.26□□□□□ -0.13
TRIM28-215ENST00000601150 MEGF10Q96KG7 1140 aa14.26□□□□□ -0.13
TRIM28-215ENST00000601150 MBOAT4Q96T53 435 aa14.26□□□□□ -0.13
TRIM28-215ENST00000601150 SLC29A1Q99808 456 aa14.26□□□□□ -0.13
TRIM28-215ENST00000601150 SLC22A4Q9H015 551 aa14.26□□□□□ -0.13
TRIM28-215ENST00000601150 OR10A2Q9H208 303 aa14.26□□□□□ -0.13
TRIM28-215ENST00000601150 NARFLQ9H6Q4 476 aa14.26□□□□□ -0.13
TRIM28-215ENST00000601150 COPS3Q9UNS2 423 aa14.26□□□□□ -0.13
TRIM28-215ENST00000601150 PPP1R3CQ9UQK1 317 aa14.26□□□□□ -0.13
TRIM28-215ENST00000601150 NOP16Q9Y3C1 178 aaKnown RBP14.26□□□□□ -0.13
TRIM28-215ENST00000601150 LRP12Q9Y561 859 aa14.26□□□□□ -0.13
TRIM28-215ENST00000601150 NIPBLQ6KC79 2804 aaeCLIP14.26□□□□□ -0.132e-8■□□□□ 11
TRIM28-215ENST00000601150 C2CD3Q4AC94 2353 aa14.25□□□□□ -0.13
TRIM28-215ENST00000601150 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.25□□□□□ -0.137e-14■■■■■ 34.8
TRIM28-215ENST00000601150 A8MV72 311 aaPredicted RBP14.25□□□□□ -0.13
TRIM28-215ENST00000601150 E9PQ18 207 aa14.25□□□□□ -0.13
TRIM28-215ENST00000601150 F5H5P2 479 aa14.25□□□□□ -0.13
TRIM28-215ENST00000601150 PHYHO14832 338 aa14.25□□□□□ -0.13
TRIM28-215ENST00000601150 ZNF254O75437 659 aa14.25□□□□□ -0.13
TRIM28-215ENST00000601150 SBK2P0C263 348 aa14.25□□□□□ -0.13
TRIM28-215ENST00000601150 ZNF16P17020 682 aaPredicted RBP14.25□□□□□ -0.13
TRIM28-215ENST00000601150 DDOSTP39656 456 aa14.25□□□□□ -0.13
TRIM28-215ENST00000601150 ROM1Q03395 351 aa14.25□□□□□ -0.13
TRIM28-215ENST00000601150 POU4F2Q12837 409 aa14.25□□□□□ -0.13
TRIM28-215ENST00000601150 TMED1Q13445 227 aa14.25□□□□□ -0.13
TRIM28-215ENST00000601150 AVPI1Q5T686 147 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms