RNA–Protein interactions for RNA: ENST00000600948.5

PLD3-223, Transcript of phospholipase D family member 3, human

TSL 2

Gene PLD3, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLD3-223	ENST00000600948	PAPOLB	Q9NRJ5	636 aa	Known RBP	13.05	□□□□□ -0.32
PLD3-223	ENST00000600948	TMEM100	Q9NV29	134 aa		13.05	□□□□□ -0.32
PLD3-223	ENST00000600948	KIF17	Q9P2E2	1029 aa		13.05	□□□□□ -0.32
PLD3-223	ENST00000600948	DOCK11	Q5JSL3	2073 aa		13.04	□□□□□ -0.32
PLD3-223	ENST00000600948	CD300LB	A8K4G0	201 aa		13.04	□□□□□ -0.32
PLD3-223	ENST00000600948	PRODH	O43272	600 aa		13.04	□□□□□ -0.32
PLD3-223	ENST00000600948	PLPP2	O43688	288 aa		13.04	□□□□□ -0.32
PLD3-223	ENST00000600948	HLA-DPB1	P04440	258 aa		13.04	□□□□□ -0.32
PLD3-223	ENST00000600948	SLC2A1	P11166	492 aa		13.04	□□□□□ -0.32
PLD3-223	ENST00000600948	THBS2	P35442	1172 aa		13.04	□□□□□ -0.32
PLD3-223	ENST00000600948	SRP9	P49458	86 aa	Known RBP	13.04	□□□□□ -0.32
PLD3-223	ENST00000600948	CRISP1	P54107	249 aa		13.04	□□□□□ -0.32
PLD3-223	ENST00000600948	GRB2	P62993	217 aa	Known RBP	13.04	□□□□□ -0.32
PLD3-223	ENST00000600948	ZNF771	Q7L3S4	317 aa	Predicted RBP	13.04	□□□□□ -0.32
PLD3-223	ENST00000600948	SHF	Q7M4L6	423 aa		13.04	□□□□□ -0.32
PLD3-223	ENST00000600948	PARP8	Q8N3A8	854 aa		13.04	□□□□□ -0.32
PLD3-223	ENST00000600948	BBS1	Q8NFJ9	593 aa		13.04	□□□□□ -0.32
PLD3-223	ENST00000600948	ZNF420	Q8TAQ5	688 aa	Predicted RBP	13.04	□□□□□ -0.32
PLD3-223	ENST00000600948	PLEKHA8	Q96JA3	519 aa		13.04	□□□□□ -0.32
PLD3-223	ENST00000600948	TOR3A	Q9H497	397 aa		13.04	□□□□□ -0.32
PLD3-223	ENST00000600948	G6PC2	Q9NQR9	355 aa		13.04	□□□□□ -0.32
PLD3-223	ENST00000600948	AP4S1	Q9Y587	144 aa		13.04	□□□□□ -0.32
PLD3-223	ENST00000600948	SVEP1	Q4LDE5	3571 aa		13.04	□□□□□ -0.32
PLD3-223	ENST00000600948	TMEM178B	H3BS89	294 aa		13.03	□□□□□ -0.32
PLD3-223	ENST00000600948	IFNL4	K9M1U5	179 aa		13.03	□□□□□ -0.32
PLD3-223	ENST00000600948	SELENOF	O60613	162 aa		13.03	□□□□□ -0.32
PLD3-223	ENST00000600948	SBK2	P0C263	348 aa		13.03	□□□□□ -0.32
PLD3-223	ENST00000600948	SLC2A5	P22732	501 aa		13.03	□□□□□ -0.32
PLD3-223	ENST00000600948	FAS	P25445	335 aa		13.03	□□□□□ -0.32
PLD3-223	ENST00000600948	OPRL1	P41146	370 aa		13.03	□□□□□ -0.32
PLD3-223	ENST00000600948	SLC15A1	P46059	708 aa		13.03	□□□□□ -0.32
PLD3-223	ENST00000600948	CX3CR1	P49238	355 aa		13.03	□□□□□ -0.32
PLD3-223	ENST00000600948	BTG1	P62324	171 aa		13.03	□□□□□ -0.32
PLD3-223	ENST00000600948	ZMYND11	Q15326	602 aa		13.03	□□□□□ -0.32
PLD3-223	ENST00000600948	TMEM155	Q4W5P6	130 aa		13.03	□□□□□ -0.32
PLD3-223	ENST00000600948	KLHL12	Q53G59	568 aa		13.03	□□□□□ -0.32
PLD3-223	ENST00000600948	SLC35D3	Q5M8T2	416 aa		13.03	□□□□□ -0.32
PLD3-223	ENST00000600948	ASRGL1	Q7L266	308 aa		13.03	□□□□□ -0.32
PLD3-223	ENST00000600948	CXXC5	Q7LFL8	322 aa	Known RBP	13.03	□□□□□ -0.32
PLD3-223	ENST00000600948	LRRC28	Q86X40	367 aa	Predicted RBP	13.03	□□□□□ -0.32
PLD3-223	ENST00000600948	OTOS	Q8NHW6	89 aa		13.03	□□□□□ -0.32
PLD3-223	ENST00000600948	SPRYD4	Q8WW59	207 aa	Predicted RBP	13.03	□□□□□ -0.32
PLD3-223	ENST00000600948	UBAP1	Q9NZ09	502 aa		13.03	□□□□□ -0.32
PLD3-223	ENST00000600948	IGHV3-64D	A0A0J9YX35	117 aa		13.02	□□□□□ -0.33
PLD3-223	ENST00000600948	XRCC2	O43543	280 aa		13.02	□□□□□ -0.33
PLD3-223	ENST00000600948	MITF	O75030	526 aa	Predicted RBP	13.02	□□□□□ -0.33
PLD3-223	ENST00000600948	HSD11B1	P28845	292 aa		13.02	□□□□□ -0.33
PLD3-223	ENST00000600948	SRP14	P37108	136 aa	Known RBP	13.02	□□□□□ -0.33
PLD3-223	ENST00000600948	PMEL	P40967	661 aa		13.02	□□□□□ -0.33
PLD3-223	ENST00000600948	CD200	P41217	278 aa		13.02	□□□□□ -0.33
PLD3-223	ENST00000600948	GATA4	P43694	442 aa		13.02	□□□□□ -0.33
PLD3-223	ENST00000600948	MAB21L1	Q13394	359 aa		13.02	□□□□□ -0.33
PLD3-223	ENST00000600948	SNAPC1	Q16533	368 aa		13.02	□□□□□ -0.33
PLD3-223	ENST00000600948	ZNF181	Q2M3W8	571 aa		13.02	□□□□□ -0.33
PLD3-223	ENST00000600948	RHOU	Q7L0Q8	258 aa		13.02	□□□□□ -0.33
PLD3-223	ENST00000600948	PRSS45	Q7RTY3	260 aa		13.02	□□□□□ -0.33
PLD3-223	ENST00000600948	AMIGO2	Q86SJ2	522 aa		13.02	□□□□□ -0.33
PLD3-223	ENST00000600948	MOGAT3	Q86VF5	341 aa		13.02	□□□□□ -0.33
PLD3-223	ENST00000600948	SPIC	Q8N5J4	248 aa		13.02	□□□□□ -0.33
PLD3-223	ENST00000600948	CELF2-AS1	Q8N7Q2	184 aa		13.02	□□□□□ -0.33
PLD3-223	ENST00000600948	SPSB4	Q96A44	273 aa		13.02	□□□□□ -0.33
PLD3-223	ENST00000600948	TEX12	Q9BXU0	123 aa		13.02	□□□□□ -0.33
PLD3-223	ENST00000600948	GABARAPL1	Q9H0R8	117 aa		13.02	□□□□□ -0.33
PLD3-223	ENST00000600948	OPA3	Q9H6K4	179 aa		13.02	□□□□□ -0.33
PLD3-223	ENST00000600948	PATZ1	Q9HBE1	687 aa	Known RBP	13.02	□□□□□ -0.33
PLD3-223	ENST00000600948	TVP23B	Q9NYZ1	205 aa		13.02	□□□□□ -0.33
PLD3-223	ENST00000600948	N6AMT1	Q9Y5N5	214 aa		13.02	□□□□□ -0.33
PLD3-223	ENST00000600948	GGT3P	A6NGU5	568 aa		13.01	□□□□□ -0.33
PLD3-223	ENST00000600948		F5H0A9	414 aa	Predicted RBP	13.01	□□□□□ -0.33
PLD3-223	ENST00000600948		G3V2T6	193 aa		13.01	□□□□□ -0.33
PLD3-223	ENST00000600948	PHF1	O43189	567 aa	Predicted RBP	13.01	□□□□□ -0.33
PLD3-223	ENST00000600948	CYB5R3	P00387	301 aa	Predicted RBP	13.01	□□□□□ -0.33
PLD3-223	ENST00000600948	PNP	P00491	289 aa		13.01	□□□□□ -0.33
PLD3-223	ENST00000600948	APOC1	P02654	83 aa		13.01	□□□□□ -0.33
PLD3-223	ENST00000600948	LYN	P07948	512 aa		13.01	□□□□□ -0.33
PLD3-223	ENST00000600948	FCGR1A	P12314	374 aa		13.01	□□□□□ -0.33
PLD3-223	ENST00000600948	CA6	P23280	308 aa		13.01	□□□□□ -0.33
PLD3-223	ENST00000600948	NAA10	P41227	235 aa	Predicted RBP	13.01	□□□□□ -0.33
PLD3-223	ENST00000600948	RAD23A	P54725	363 aa		13.01	□□□□□ -0.33
PLD3-223	ENST00000600948	ZNF121	P58317	390 aa	Predicted RBP	13.01	□□□□□ -0.33
PLD3-223	ENST00000600948	ESRRG	P62508	458 aa		13.01	□□□□□ -0.33
PLD3-223	ENST00000600948	APOF	Q13790	326 aa		13.01	□□□□□ -0.33
PLD3-223	ENST00000600948	PTGES3	Q15185	160 aa	Known RBP	13.01	□□□□□ -0.33
PLD3-223	ENST00000600948	OR8G1	Q15617	311 aa		13.01	□□□□□ -0.33
PLD3-223	ENST00000600948	KDM4D	Q6B0I6	523 aa		13.01	□□□□□ -0.33
PLD3-223	ENST00000600948	ZNF454	Q8N9F8	522 aa		13.01	□□□□□ -0.33
PLD3-223	ENST00000600948	OR56B2P	Q8NGI1	322 aa		13.01	□□□□□ -0.33
PLD3-223	ENST00000600948	LRTOMT	Q8WZ04	291 aa		13.01	□□□□□ -0.33
PLD3-223	ENST00000600948	SLC22A4	Q9H015	551 aa		13.01	□□□□□ -0.33
PLD3-223	ENST00000600948	KRT84	Q9NSB2	600 aa		13.01	□□□□□ -0.33
PLD3-223	ENST00000600948	DNAJC27	Q9NZQ0	273 aa		13.01	□□□□□ -0.33
PLD3-223	ENST00000600948	KLHDC2	Q9Y2U9	406 aa		13.01	□□□□□ -0.33
PLD3-223	ENST00000600948	NOP16	Q9Y3C1	178 aa	Known RBP	13.01	□□□□□ -0.33
PLD3-223	ENST00000600948	CCDC182	A6NF36	153 aa		13	□□□□□ -0.33
PLD3-223	ENST00000600948	TBX1	O43435	398 aa		13	□□□□□ -0.33
PLD3-223	ENST00000600948	PRKY	O43930	277 aa		13	□□□□□ -0.33
PLD3-223	ENST00000600948	GMDS	O60547	372 aa		13	□□□□□ -0.33
PLD3-223	ENST00000600948	CIB2	O75838	187 aa		13	□□□□□ -0.33
PLD3-223	ENST00000600948	AVP	P01185	164 aa		13	□□□□□ -0.33
PLD3-223	ENST00000600948	ANXA2	P07355	339 aa	Known RBP	13	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 27 ms