RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 CLDN25C9JDP6 229 aa13.7□□□□□ -0.22
LSM4-206ENST00000600289 E9PQ18 207 aa13.7□□□□□ -0.22
LSM4-206ENST00000600289 EI24O14681 340 aa13.7□□□□□ -0.22
LSM4-206ENST00000600289 XRCC2O43543 280 aa13.7□□□□□ -0.22
LSM4-206ENST00000600289 TNFRSF1AP19438 455 aa13.7□□□□□ -0.22
LSM4-206ENST00000600289 ALOX5APP20292 161 aa13.7□□□□□ -0.22
LSM4-206ENST00000600289 HSD11B1P28845 292 aa13.7□□□□□ -0.22
LSM4-206ENST00000600289 CX3CR1P49238 355 aa13.7□□□□□ -0.22
LSM4-206ENST00000600289 ALDH3A2P51648 485 aa13.7□□□□□ -0.22
LSM4-206ENST00000600289 SLC3A1Q07837 685 aa13.7□□□□□ -0.22
LSM4-206ENST00000600289 TRIP10Q15642 601 aa13.7□□□□□ -0.22
LSM4-206ENST00000600289 CYB5R2Q6BCY4 276 aa13.7□□□□□ -0.22
LSM4-206ENST00000600289 MEPCEQ7L2J0 689 aaKnown RBP13.7□□□□□ -0.22
LSM4-206ENST00000600289 GID4Q8IVV7 300 aa13.7□□□□□ -0.22
LSM4-206ENST00000600289 ZNF283Q8N7M2 679 aa13.7□□□□□ -0.22
LSM4-206ENST00000600289 OR2Z1Q8NG97 314 aa13.7□□□□□ -0.22
LSM4-206ENST00000600289 NIPAL2Q9H841 368 aa13.7□□□□□ -0.22
LSM4-206ENST00000600289 TMEM160Q9NX00 188 aa13.7□□□□□ -0.22
LSM4-206ENST00000600289 HAX1O00165 279 aa13.69□□□□□ -0.22
LSM4-206ENST00000600289 MLNRO43193 412 aa13.69□□□□□ -0.22
LSM4-206ENST00000600289 CDC14BO60729 498 aa13.69□□□□□ -0.22
LSM4-206ENST00000600289 H2BFMP0C1H6 154 aa13.69□□□□□ -0.22
LSM4-206ENST00000600289 ANOS1P23352 680 aa13.69□□□□□ -0.22
LSM4-206ENST00000600289 NAA10P41227 235 aaPredicted RBP13.69□□□□□ -0.22
LSM4-206ENST00000600289 PRKXP51817 358 aa13.69□□□□□ -0.22
LSM4-206ENST00000600289 RAD23AP54725 363 aa13.69□□□□□ -0.22
LSM4-206ENST00000600289 ZNF92Q03936 586 aa13.69□□□□□ -0.22
LSM4-206ENST00000600289 GLYATL3Q5SZD4 288 aa13.69□□□□□ -0.22
LSM4-206ENST00000600289 DEGS2Q6QHC5 323 aa13.69□□□□□ -0.22
LSM4-206ENST00000600289 MRPL21Q7Z2W9 205 aaKnown RBP13.69□□□□□ -0.22
LSM4-206ENST00000600289 OR5AS1Q8N127 324 aa13.69□□□□□ -0.22
LSM4-206ENST00000600289 PQLC1Q8N2U9 271 aa13.69□□□□□ -0.22
LSM4-206ENST00000600289 OR52H1Q8NGJ2 320 aa13.69□□□□□ -0.22
LSM4-206ENST00000600289 OR8J1Q8NGP2 316 aa13.69□□□□□ -0.22
LSM4-206ENST00000600289 CNN2Q99439 309 aaKnown RBP13.69□□□□□ -0.22
LSM4-206ENST00000600289 MNTQ99583 582 aa13.69□□□□□ -0.22
LSM4-206ENST00000600289 SLC22A4Q9H015 551 aa13.69□□□□□ -0.22
LSM4-206ENST00000600289 RIBC2Q9H4K1 309 aa13.69□□□□□ -0.22
LSM4-206ENST00000600289 KLHDC2Q9Y2U9 406 aa13.69□□□□□ -0.22
LSM4-206ENST00000600289 NOP16Q9Y3C1 178 aaKnown RBP13.69□□□□□ -0.22
LSM4-206ENST00000600289 ORC6Q9Y5N6 252 aa13.69□□□□□ -0.22
LSM4-206ENST00000600289 TMEM14AQ9Y6G1 99 aa13.69□□□□□ -0.22
LSM4-206ENST00000600289 SVEP1Q4LDE5 3571 aa13.68□□□□□ -0.22
LSM4-206ENST00000600289 MALRD1Q5VYJ5 2156 aa13.68□□□□□ -0.22
LSM4-206ENST00000600289 IFNL4K9M1U5 179 aa13.68□□□□□ -0.22
LSM4-206ENST00000600289 PPIHO43447 177 aaKnown RBP13.68□□□□□ -0.22
LSM4-206ENST00000600289 DCTDP32321 178 aa13.68□□□□□ -0.22
LSM4-206ENST00000600289 POLR2IP36954 125 aaKnown RBP13.68□□□□□ -0.22
LSM4-206ENST00000600289 PSMA6P60900 246 aaKnown RBP13.68□□□□□ -0.22
LSM4-206ENST00000600289 ROM1Q03395 351 aa13.68□□□□□ -0.22
LSM4-206ENST00000600289 TMED1Q13445 227 aa13.68□□□□□ -0.22
LSM4-206ENST00000600289 SPRNQ5BIV9 151 aa13.68□□□□□ -0.22
LSM4-206ENST00000600289 KCTD18Q6PI47 426 aaPredicted RBP13.68□□□□□ -0.22
LSM4-206ENST00000600289 SPATC1Q76KD6 591 aa13.68□□□□□ -0.22
LSM4-206ENST00000600289 CELF2-AS1Q8N7Q2 184 aa13.68□□□□□ -0.22
LSM4-206ENST00000600289 OR2AE1Q8NHA4 323 aa13.68□□□□□ -0.22
LSM4-206ENST00000600289 CLDND2Q8NHS1 167 aa13.68□□□□□ -0.22
LSM4-206ENST00000600289 THEM6Q8WUY1 208 aa13.68□□□□□ -0.22
LSM4-206ENST00000600289 TRUB1Q8WWH5 349 aaKnown RBP13.68□□□□□ -0.22
LSM4-206ENST00000600289 HRASLS5Q96KN8 279 aa13.68□□□□□ -0.22
LSM4-206ENST00000600289 OR2V2Q96R30 315 aa13.68□□□□□ -0.22
LSM4-206ENST00000600289 C9orf16Q9BUW7 83 aa13.68□□□□□ -0.22
LSM4-206ENST00000600289 TMEM100Q9NV29 134 aa13.68□□□□□ -0.22
LSM4-206ENST00000600289 LAMP5Q9UJQ1 280 aa13.68□□□□□ -0.22
LSM4-206ENST00000600289 CACNG2Q9Y698 323 aa13.68□□□□□ -0.22
LSM4-206ENST00000600289 LRP5LA4QPB2 252 aa13.67□□□□□ -0.22
LSM4-206ENST00000600289 C5orf63A6NC05 138 aa13.67□□□□□ -0.22
LSM4-206ENST00000600289 CD300LBA8K4G0 201 aa13.67□□□□□ -0.22
LSM4-206ENST00000600289 A8MV72 311 aaPredicted RBP13.67□□□□□ -0.22
LSM4-206ENST00000600289 M0R129 80 aa13.67□□□□□ -0.22
LSM4-206ENST00000600289 PHYHO14832 338 aa13.67□□□□□ -0.22
LSM4-206ENST00000600289 PHF1O43189 567 aaPredicted RBP13.67□□□□□ -0.22
LSM4-206ENST00000600289 SLC2A1P11166 492 aa13.67□□□□□ -0.22
LSM4-206ENST00000600289 ZNF16P17020 682 aaPredicted RBP13.67□□□□□ -0.22
LSM4-206ENST00000600289 CFL1P23528 166 aaKnown RBP13.67□□□□□ -0.22
LSM4-206ENST00000600289 IL2RGP31785 369 aa13.67□□□□□ -0.22
LSM4-206ENST00000600289 DDOSTP39656 456 aa13.67□□□□□ -0.22
LSM4-206ENST00000600289 GATA4P43694 442 aa13.67□□□□□ -0.22
LSM4-206ENST00000600289 SRP9P49458 86 aaKnown RBP13.67□□□□□ -0.22
LSM4-206ENST00000600289 CDH15P55291 814 aa13.67□□□□□ -0.22
LSM4-206ENST00000600289 ZNF121P58317 390 aaPredicted RBP13.67□□□□□ -0.22
LSM4-206ENST00000600289 CDC42P60953 191 aa13.67□□□□□ -0.22
LSM4-206ENST00000600289 CBR4Q8N4T8 237 aa13.67□□□□□ -0.22
LSM4-206ENST00000600289 BHLHE23Q8NDY6 225 aa13.67□□□□□ -0.22
LSM4-206ENST00000600289 ITLN1Q8WWA0 313 aa13.67□□□□□ -0.22
LSM4-206ENST00000600289 ASB17Q8WXJ9 295 aa13.67□□□□□ -0.22
LSM4-206ENST00000600289 RAB1CQ92928 201 aa13.67□□□□□ -0.22
LSM4-206ENST00000600289 MSI2Q96DH6 328 aaKnown RBP13.67□□□□□ -0.22
LSM4-206ENST00000600289 TIMD4Q96H15 378 aa13.67□□□□□ -0.22
LSM4-206ENST00000600289 MEGF10Q96KG7 1140 aa13.67□□□□□ -0.22
LSM4-206ENST00000600289 IL4I1Q96RQ9 567 aa13.67□□□□□ -0.22
LSM4-206ENST00000600289 RGCCQ9H4X1 137 aa13.67□□□□□ -0.22
LSM4-206ENST00000600289 ADGRL4Q9HBW9 690 aa13.67□□□□□ -0.22
LSM4-206ENST00000600289 MRPL15Q9P015 296 aaKnown RBP13.67□□□□□ -0.22
LSM4-206ENST00000600289 H2AFY2Q9P0M6 372 aaPredicted RBP13.67□□□□□ -0.22
LSM4-206ENST00000600289 WARS2Q9UGM6 360 aaKnown RBP13.67□□□□□ -0.22
LSM4-206ENST00000600289 WIPI2Q9Y4P8 454 aa13.67□□□□□ -0.22
LSM4-206ENST00000600289 LRP12Q9Y561 859 aa13.67□□□□□ -0.22
LSM4-206ENST00000600289 ACOD1A6NK06 481 aa13.66□□□□□ -0.22
LSM4-206ENST00000600289 GMDSO60547 372 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms