RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 PATZ1Q9HBE1 687 aaKnown RBP15.77■□□□□ 0.12
PNKP-213ENST00000599543 BAIAP2Q9UQB8 552 aa15.77■□□□□ 0.12
PNKP-213ENST00000599543 RIIAD1A6NNX1 92 aa15.76■□□□□ 0.11
PNKP-213ENST00000599543 BAG2O95816 211 aa15.76■□□□□ 0.11
PNKP-213ENST00000599543 FSHBP01225 129 aa15.76■□□□□ 0.11
PNKP-213ENST00000599543 MDH2P40926 338 aaKnown RBP15.76■□□□□ 0.11
PNKP-213ENST00000599543 RPS27P42677 84 aaKnown RBP15.76■□□□□ 0.11
PNKP-213ENST00000599543 MMP16P51512 607 aa15.76■□□□□ 0.11
PNKP-213ENST00000599543 CRISP1P54107 249 aa15.76■□□□□ 0.11
PNKP-213ENST00000599543 ZFP1Q6P2D0 407 aa15.76■□□□□ 0.11
PNKP-213ENST00000599543 FBXW12Q6X9E4 464 aa15.76■□□□□ 0.11
PNKP-213ENST00000599543 LINC00346Q8IVM7 164 aa15.76■□□□□ 0.11
PNKP-213ENST00000599543 MUC20Q8N307 709 aaPredicted RBP15.76■□□□□ 0.11
PNKP-213ENST00000599543 C3orf56Q8N813 242 aa15.76■□□□□ 0.11
PNKP-213ENST00000599543 OR10AD1Q8NGE0 317 aa15.76■□□□□ 0.11
PNKP-213ENST00000599543 ZNF582Q96NG8 517 aaPredicted RBP15.76■□□□□ 0.11
PNKP-213ENST00000599543 SIGLEC11Q96RL6 698 aa15.76■□□□□ 0.11
PNKP-213ENST00000599543 CIB1Q99828 191 aa15.76■□□□□ 0.11
PNKP-213ENST00000599543 GABARAPL1Q9H0R8 117 aa15.76■□□□□ 0.11
PNKP-213ENST00000599543 GCM1Q9NP62 436 aa15.76■□□□□ 0.11
PNKP-213ENST00000599543 MMP26Q9NRE1 261 aa15.76■□□□□ 0.11
PNKP-213ENST00000599543 CMC2Q9NRP2 79 aa15.76■□□□□ 0.11
PNKP-213ENST00000599543 LHFPL6Q9Y693 200 aa15.76■□□□□ 0.11
PNKP-213ENST00000599543 TMEM89A2RUT3 159 aa15.75■□□□□ 0.11
PNKP-213ENST00000599543 IFNL4K9M1U5 179 aa15.75■□□□□ 0.11
PNKP-213ENST00000599543 IFNGP01579 166 aa15.75■□□□□ 0.11
PNKP-213ENST00000599543 PSKH1P11801 424 aa15.75■□□□□ 0.11
PNKP-213ENST00000599543 SPI1P17947 270 aa15.75■□□□□ 0.11
PNKP-213ENST00000599543 POLR2IP36954 125 aaKnown RBP15.75■□□□□ 0.11
PNKP-213ENST00000599543 SEC61A1P61619 476 aaKnown RBP15.75■□□□□ 0.11
PNKP-213ENST00000599543 CDK5Q00535 292 aa15.75■□□□□ 0.11
PNKP-213ENST00000599543 ZNF154Q13106 437 aa15.75■□□□□ 0.11
PNKP-213ENST00000599543 ESCO2Q56NI9 601 aa15.75■□□□□ 0.11
PNKP-213ENST00000599543 KDM4DQ6B0I6 523 aa15.75■□□□□ 0.11
PNKP-213ENST00000599543 OR2T2Q6IF00 324 aa15.75■□□□□ 0.11
PNKP-213ENST00000599543 RBMS3Q6XE24 437 aaKnown RBP15.75■□□□□ 0.11
PNKP-213ENST00000599543 ZBTB46Q86UZ6 589 aa15.75■□□□□ 0.11
PNKP-213ENST00000599543 DEFB108BQ8NET1 73 aa15.75■□□□□ 0.11
PNKP-213ENST00000599543 SLC26A10Q8NG04 563 aa15.75■□□□□ 0.11
PNKP-213ENST00000599543 OR8G5Q8NG78 346 aa15.75■□□□□ 0.11
PNKP-213ENST00000599543 OR13G1Q8NGZ3 307 aa15.75■□□□□ 0.11
PNKP-213ENST00000599543 MRPL22Q9NWU5 206 aaKnown RBP15.75■□□□□ 0.11
PNKP-213ENST00000599543 TVP23BQ9NYZ1 205 aa15.75■□□□□ 0.11
PNKP-213ENST00000599543 POLR3KQ9Y2Y1 108 aaPredicted RBP15.75■□□□□ 0.11
PNKP-213ENST00000599543 AUP1Q9Y679 476 aa15.75■□□□□ 0.11
PNKP-213ENST00000599543 TMEM178BH3BS89 294 aa15.74■□□□□ 0.11
PNKP-213ENST00000599543 ZNF3P17036 446 aa15.74■□□□□ 0.11
PNKP-213ENST00000599543 SLC6A9P48067 706 aa15.74■□□□□ 0.11
PNKP-213ENST00000599543 SRP9P49458 86 aaKnown RBP15.74■□□□□ 0.11
PNKP-213ENST00000599543 HIST1H3AP68431 136 aa15.74■□□□□ 0.11
PNKP-213ENST00000599543 HIST2H3PS2Q5TEC6 136 aa15.74■□□□□ 0.11
PNKP-213ENST00000599543 PLBD1Q6P4A8 553 aa15.74■□□□□ 0.11
PNKP-213ENST00000599543 HIST2H3AQ71DI3 136 aa15.74■□□□□ 0.11
PNKP-213ENST00000599543 ZNF511Q8NB15 262 aa15.74■□□□□ 0.11
PNKP-213ENST00000599543 BHLHE23Q8NDY6 225 aa15.74■□□□□ 0.11
PNKP-213ENST00000599543 BBS1Q8NFJ9 593 aa15.74■□□□□ 0.11
PNKP-213ENST00000599543 OR6K6Q8NGW6 343 aa15.74■□□□□ 0.11
PNKP-213ENST00000599543 OR2T4Q8NH00 348 aa15.74■□□□□ 0.11
PNKP-213ENST00000599543 ZMYND19Q96E35 227 aaPredicted RBP15.74■□□□□ 0.11
PNKP-213ENST00000599543 MRI1Q9BV20 369 aa15.74■□□□□ 0.11
PNKP-213ENST00000599543 NMNAT2Q9BZQ4 307 aa15.74■□□□□ 0.11
PNKP-213ENST00000599543 OR51V1Q9H2C8 321 aa15.74■□□□□ 0.11
PNKP-213ENST00000599543 RIBC2Q9H4K1 309 aa15.74■□□□□ 0.11
PNKP-213ENST00000599543 ESM1Q9NQ30 184 aa15.74■□□□□ 0.11
PNKP-213ENST00000599543 DDX28Q9NUL7 540 aaKnown RBP15.74■□□□□ 0.11
PNKP-213ENST00000599543 OR5V1Q9UGF6 321 aa15.74■□□□□ 0.11
PNKP-213ENST00000599543 A8MXK9 166 aa15.73■□□□□ 0.11
PNKP-213ENST00000599543 F5H0A9 414 aaPredicted RBP15.73■□□□□ 0.11
PNKP-213ENST00000599543 TRAPPC2LH3BP13 241 aa15.73■□□□□ 0.11
PNKP-213ENST00000599543 EI24O14681 340 aa15.73■□□□□ 0.11
PNKP-213ENST00000599543 ZNF12P17014 697 aa15.73■□□□□ 0.11
PNKP-213ENST00000599543 PTGES3Q15185 160 aaKnown RBP15.73■□□□□ 0.11
PNKP-213ENST00000599543 ZNF420Q8TAQ5 688 aaPredicted RBP15.73■□□□□ 0.11
PNKP-213ENST00000599543 DVL3Q92997 716 aaPredicted RBP15.73■□□□□ 0.11
PNKP-213ENST00000599543 MEGF10Q96KG7 1140 aa15.73■□□□□ 0.11
PNKP-213ENST00000599543 CDADC1Q9BWV3 514 aa15.73■□□□□ 0.11
PNKP-213ENST00000599543 WDR76Q9H967 626 aa15.73■□□□□ 0.11
PNKP-213ENST00000599543 SLC25A19Q9HC21 320 aa15.73■□□□□ 0.11
PNKP-213ENST00000599543 NUP50Q9UKX7 468 aa15.73■□□□□ 0.11
PNKP-213ENST00000599543 LRCH1Q9Y2L9 728 aa15.73■□□□□ 0.11
PNKP-213ENST00000599543 PPIAL4AQ9Y536 164 aa15.73■□□□□ 0.11
PNKP-213ENST00000599543 INSIG2Q9Y5U4 225 aa15.73■□□□□ 0.11
PNKP-213ENST00000599543 LRRC30A6NM36 301 aa15.72■□□□□ 0.11
PNKP-213ENST00000599543 CEACAM18A8MTB9 384 aa15.72■□□□□ 0.11
PNKP-213ENST00000599543 IQCF6A8MYZ5 107 aa15.72■□□□□ 0.11
PNKP-213ENST00000599543 RPS2P15880 293 aaKnown RBP15.72■□□□□ 0.11
PNKP-213ENST00000599543 SELEP16581 610 aa15.72■□□□□ 0.11
PNKP-213ENST00000599543 UBA52P62987 128 aaKnown RBP15.72■□□□□ 0.11
PNKP-213ENST00000599543 SNAPC1Q16533 368 aa15.72■□□□□ 0.11
PNKP-213ENST00000599543 ZIK1Q3SY52 487 aaPredicted RBP15.72■□□□□ 0.11
PNKP-213ENST00000599543 SLC18B1Q6NT16 456 aa15.72■□□□□ 0.11
PNKP-213ENST00000599543 CFAP77Q6ZQR2 320 aa15.72■□□□□ 0.11
PNKP-213ENST00000599543 BCDIN3DQ7Z5W3 292 aaKnown RBP15.72■□□□□ 0.11
PNKP-213ENST00000599543 CPOQ8IVL8 374 aa15.72■□□□□ 0.11
PNKP-213ENST00000599543 PQLC1Q8N2U9 271 aa15.72■□□□□ 0.11
PNKP-213ENST00000599543 PARP8Q8N3A8 854 aa15.72■□□□□ 0.11
PNKP-213ENST00000599543 CBR4Q8N4T8 237 aa15.72■□□□□ 0.11
PNKP-213ENST00000599543 ZDHHC22Q8N966 263 aa15.72■□□□□ 0.11
PNKP-213ENST00000599543 OR2AJ1Q8NGZ0 328 aa15.72■□□□□ 0.11
PNKP-213ENST00000599543 DNAJC9Q8WXX5 260 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms