RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 TNFRSF1AP19438 455 aa14.16□□□□□ -0.14
SSBP4-204ENST00000597724 ALOX5APP20292 161 aa14.16□□□□□ -0.14
SSBP4-204ENST00000597724 HSD11B1P28845 292 aa14.16□□□□□ -0.14
SSBP4-204ENST00000597724 CX3CR1P49238 355 aa14.16□□□□□ -0.14
SSBP4-204ENST00000597724 MVKQ03426 396 aa14.16□□□□□ -0.14
SSBP4-204ENST00000597724 GLYATL3Q5SZD4 288 aa14.16□□□□□ -0.14
SSBP4-204ENST00000597724 LCN1P1Q5VSP4 162 aa14.16□□□□□ -0.14
SSBP4-204ENST00000597724 NXNL2Q5VZ03 156 aa14.16□□□□□ -0.14
SSBP4-204ENST00000597724 MEPCEQ7L2J0 689 aaKnown RBP14.16□□□□□ -0.14
SSBP4-204ENST00000597724 PRSS45Q7RTY3 260 aa14.16□□□□□ -0.14
SSBP4-204ENST00000597724 MRPL21Q7Z2W9 205 aaKnown RBP14.16□□□□□ -0.14
SSBP4-204ENST00000597724 OR2AE1Q8NHA4 323 aa14.16□□□□□ -0.14
SSBP4-204ENST00000597724 CLDND2Q8NHS1 167 aa14.16□□□□□ -0.14
SSBP4-204ENST00000597724 ITLN1Q8WWA0 313 aa14.16□□□□□ -0.14
SSBP4-204ENST00000597724 C1orf159Q96HA4 380 aa14.16□□□□□ -0.14
SSBP4-204ENST00000597724 OR2V2Q96R30 315 aa14.16□□□□□ -0.14
SSBP4-204ENST00000597724 IL4I1Q96RQ9 567 aa14.16□□□□□ -0.14
SSBP4-204ENST00000597724 YIPF3Q9GZM5 350 aa14.16□□□□□ -0.14
SSBP4-204ENST00000597724 RIBC2Q9H4K1 309 aa14.16□□□□□ -0.14
SSBP4-204ENST00000597724 S100A14Q9HCY8 104 aa14.16□□□□□ -0.14
SSBP4-204ENST00000597724 TMEM100Q9NV29 134 aa14.16□□□□□ -0.14
SSBP4-204ENST00000597724 USE1Q9NZ43 259 aa14.16□□□□□ -0.14
SSBP4-204ENST00000597724 H2AFY2Q9P0M6 372 aaPredicted RBP14.16□□□□□ -0.14
SSBP4-204ENST00000597724 N6AMT1Q9Y5N5 214 aa14.16□□□□□ -0.14
SSBP4-204ENST00000597724 TANC2Q9HCD6 1990 aa14.16□□□□□ -0.14
SSBP4-204ENST00000597724 ANK3Q12955 4377 aaKnown RBP14.15□□□□□ -0.14
SSBP4-204ENST00000597724 LOC100289279A0A1B0GTE1 492 aa14.15□□□□□ -0.14
SSBP4-204ENST00000597724 CD300LBA8K4G0 201 aa14.15□□□□□ -0.14
SSBP4-204ENST00000597724 EI24O14681 340 aa14.15□□□□□ -0.14
SSBP4-204ENST00000597724 MLNRO43193 412 aa14.15□□□□□ -0.14
SSBP4-204ENST00000597724 XRCC2O43543 280 aa14.15□□□□□ -0.14
SSBP4-204ENST00000597724 CRLF1O75462 422 aa14.15□□□□□ -0.14
SSBP4-204ENST00000597724 HCCSP53701 268 aa14.15□□□□□ -0.14
SSBP4-204ENST00000597724 SLC3A1Q07837 685 aa14.15□□□□□ -0.14
SSBP4-204ENST00000597724 AVPI1Q5T686 147 aa14.15□□□□□ -0.14
SSBP4-204ENST00000597724 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.15□□□□□ -0.14
SSBP4-204ENST00000597724 OR10AD1Q8NGE0 317 aa14.15□□□□□ -0.14
SSBP4-204ENST00000597724 NARFLQ9H6Q4 476 aa14.15□□□□□ -0.14
SSBP4-204ENST00000597724 SP140LQ9H930 580 aa14.15□□□□□ -0.14
SSBP4-204ENST00000597724 LAMP5Q9UJQ1 280 aa14.15□□□□□ -0.14
SSBP4-204ENST00000597724 WIPI2Q9Y4P8 454 aa14.15□□□□□ -0.14
SSBP4-204ENST00000597724 JMJD1CQ15652 2540 aa14.15□□□□□ -0.14
SSBP4-204ENST00000597724 DYSFO75923 2080 aa14.14□□□□□ -0.15
SSBP4-204ENST00000597724 SLC22A31A6NKX4 558 aa14.14□□□□□ -0.15
SSBP4-204ENST00000597724 TGFAP01135 160 aa14.14□□□□□ -0.15
SSBP4-204ENST00000597724 ANXA2P07355 339 aaKnown RBP14.14□□□□□ -0.15
SSBP4-204ENST00000597724 MRPL3P09001 348 aaKnown RBP14.14□□□□□ -0.15
SSBP4-204ENST00000597724 ALDH3A2P51648 485 aa14.14□□□□□ -0.15
SSBP4-204ENST00000597724 ZNF121P58317 390 aaPredicted RBP14.14□□□□□ -0.15
SSBP4-204ENST00000597724 LMO4P61968 165 aa14.14□□□□□ -0.15
SSBP4-204ENST00000597724 FAM166AQ6J272 317 aa14.14□□□□□ -0.15
SSBP4-204ENST00000597724 LRRN1Q6UXK5 716 aa14.14□□□□□ -0.15
SSBP4-204ENST00000597724 SPRYD4Q8WW59 207 aaPredicted RBP14.14□□□□□ -0.15
SSBP4-204ENST00000597724 RAB1CQ92928 201 aa14.14□□□□□ -0.15
SSBP4-204ENST00000597724 SPSB4Q96A44 273 aa14.14□□□□□ -0.15
SSBP4-204ENST00000597724 TIMD4Q96H15 378 aa14.14□□□□□ -0.15
SSBP4-204ENST00000597724 OPA3Q9H6K4 179 aa14.14□□□□□ -0.15
SSBP4-204ENST00000597724 DNAJC27Q9NZQ0 273 aa14.14□□□□□ -0.15
SSBP4-204ENST00000597724 PPP1R3CQ9UQK1 317 aa14.14□□□□□ -0.15
SSBP4-204ENST00000597724 GGT3PA6NGU5 568 aa14.13□□□□□ -0.15
SSBP4-204ENST00000597724 TBX1O43435 398 aa14.13□□□□□ -0.15
SSBP4-204ENST00000597724 HLA-DPB1P04440 258 aa14.13□□□□□ -0.15
SSBP4-204ENST00000597724 SRP9P49458 86 aaKnown RBP14.13□□□□□ -0.15
SSBP4-204ENST00000597724 RAD23AP54725 363 aa14.13□□□□□ -0.15
SSBP4-204ENST00000597724 HNRNPA0Q13151 305 aaKnown RBP14.13□□□□□ -0.15
SSBP4-204ENST00000597724 KCTD18Q6PI47 426 aaPredicted RBP14.13□□□□□ -0.15
SSBP4-204ENST00000597724 FAM57BQ71RH2 274 aa14.13□□□□□ -0.15
SSBP4-204ENST00000597724 KRT77Q7Z794 578 aa14.13□□□□□ -0.15
SSBP4-204ENST00000597724 GID4Q8IVV7 300 aa14.13□□□□□ -0.15
SSBP4-204ENST00000597724 CBR4Q8N4T8 237 aa14.13□□□□□ -0.15
SSBP4-204ENST00000597724 LINC01356Q8N9X3 169 aa14.13□□□□□ -0.15
SSBP4-204ENST00000597724 OR52H1Q8NGJ2 320 aa14.13□□□□□ -0.15
SSBP4-204ENST00000597724 OR8J1Q8NGP2 316 aa14.13□□□□□ -0.15
SSBP4-204ENST00000597724 SGK3Q96BR1 496 aa14.13□□□□□ -0.15
SSBP4-204ENST00000597724 MEGF10Q96KG7 1140 aa14.13□□□□□ -0.15
SSBP4-204ENST00000597724 CNN2Q99439 309 aaKnown RBP14.13□□□□□ -0.15
SSBP4-204ENST00000597724 NIPAL2Q9H841 368 aa14.13□□□□□ -0.15
SSBP4-204ENST00000597724 GCM1Q9NP62 436 aa14.13□□□□□ -0.15
SSBP4-204ENST00000597724 BRD7Q9NPI1 651 aa14.13□□□□□ -0.15
SSBP4-204ENST00000597724 TMEM106BQ9NUM4 274 aa14.13□□□□□ -0.15
SSBP4-204ENST00000597724 TMEM160Q9NX00 188 aa14.13□□□□□ -0.15
SSBP4-204ENST00000597724 DCAF16Q9NXF7 216 aa14.13□□□□□ -0.15
SSBP4-204ENST00000597724 HAO2Q9NYQ3 351 aa14.13□□□□□ -0.15
SSBP4-204ENST00000597724 ZNF319Q9P2F9 582 aa14.13□□□□□ -0.15
SSBP4-204ENST00000597724 LRP12Q9Y561 859 aa14.13□□□□□ -0.15
SSBP4-204ENST00000597724 ORC6Q9Y5N6 252 aa14.13□□□□□ -0.15
SSBP4-204ENST00000597724 TMEM14AQ9Y6G1 99 aa14.13□□□□□ -0.15
SSBP4-204ENST00000597724 MXRA5Q9NR99 2828 aa14.13□□□□□ -0.15
SSBP4-204ENST00000597724 F5H5P2 479 aa14.12□□□□□ -0.15
SSBP4-204ENST00000597724 LMX1BO60663 402 aa14.12□□□□□ -0.15
SSBP4-204ENST00000597724 CA6P23280 308 aa14.12□□□□□ -0.15
SSBP4-204ENST00000597724 RBMXP38159 391 aaKnown RBP14.12□□□□□ -0.15
SSBP4-204ENST00000597724 CDH15P55291 814 aa14.12□□□□□ -0.15
SSBP4-204ENST00000597724 CDC42P60953 191 aa14.12□□□□□ -0.15
SSBP4-204ENST00000597724 DEGS2Q6QHC5 323 aa14.12□□□□□ -0.15
SSBP4-204ENST00000597724 PEG10Q86TG7 708 aaKnown RBP14.12□□□□□ -0.15
SSBP4-204ENST00000597724 PQLC1Q8N2U9 271 aa14.12□□□□□ -0.15
SSBP4-204ENST00000597724 HRASLS5Q96KN8 279 aa14.12□□□□□ -0.15
SSBP4-204ENST00000597724 C9orf16Q9BUW7 83 aa14.12□□□□□ -0.15
SSBP4-204ENST00000597724 SLC22A4Q9H015 551 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms