RNA–Protein interactions for RNA: ENST00000596672.5

LIG1-213, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-213ENST00000596672 DCAF12L2Q5VW00 463 aa8.77□□□□□ -1.01
LIG1-213ENST00000596672 PRAMEF6Q5VXH4 476 aa8.77□□□□□ -1.01
LIG1-213ENST00000596672 RASSF6Q6ZTQ3 369 aa8.77□□□□□ -1.01
LIG1-213ENST00000596672 MOGAT3Q86VF5 341 aa8.77□□□□□ -1.01
LIG1-213ENST00000596672 JAZF1Q86VZ6 243 aa8.77□□□□□ -1.01
LIG1-213ENST00000596672 LNX2Q8N448 690 aa8.77□□□□□ -1.01
LIG1-213ENST00000596672 GALNT4Q8N4A0 578 aa8.77□□□□□ -1.01
LIG1-213ENST00000596672 IQCF1Q8N6M8 205 aa8.77□□□□□ -1.01
LIG1-213ENST00000596672 ATG16L2Q8NAA4 619 aa8.77□□□□□ -1.01
LIG1-213ENST00000596672 OR2AE1Q8NHA4 323 aa8.77□□□□□ -1.01
LIG1-213ENST00000596672 POP5Q969H6 163 aaKnown RBP8.77□□□□□ -1.01
LIG1-213ENST00000596672 APOBEC3DQ96AK3 386 aaPredicted RBP8.77□□□□□ -1.01
LIG1-213ENST00000596672 RAB39BQ96DA2 213 aa8.77□□□□□ -1.01
LIG1-213ENST00000596672 TIMD4Q96H15 378 aa8.77□□□□□ -1.01
LIG1-213ENST00000596672 CENPNQ96H22 339 aaPredicted RBP8.77□□□□□ -1.01
LIG1-213ENST00000596672 DIRC2Q96SL1 478 aa8.77□□□□□ -1.01
LIG1-213ENST00000596672 NIPSNAP1Q9BPW8 284 aa8.77□□□□□ -1.01
LIG1-213ENST00000596672 VCX3BQ9H321 246 aa8.77□□□□□ -1.01
LIG1-213ENST00000596672 MAGIXQ9H6Y5 334 aa8.77□□□□□ -1.01
LIG1-213ENST00000596672 MED20Q9H944 212 aa8.77□□□□□ -1.01
LIG1-213ENST00000596672 ZNF319Q9P2F9 582 aa8.77□□□□□ -1.01
LIG1-213ENST00000596672 ZNF69Q9UC07 566 aa8.77□□□□□ -1.01
LIG1-213ENST00000596672 PPP1R3CQ9UQK1 317 aa8.77□□□□□ -1.01
LIG1-213ENST00000596672 COMMD3-BMI1R4GMX3 469 aa8.77□□□□□ -1.01
LIG1-213ENST00000596672 U3KQV3 271 aa8.77□□□□□ -1.01
LIG1-213ENST00000596672 A0A0G2JMP0 313 aa8.76□□□□□ -1.01
LIG1-213ENST00000596672 A0A0X1KG70 313 aa8.76□□□□□ -1.01
LIG1-213ENST00000596672 A8MXK9 166 aa8.76□□□□□ -1.01
LIG1-213ENST00000596672 GNGT2O14610 69 aa8.76□□□□□ -1.01
LIG1-213ENST00000596672 TNFRSF13BO14836 293 aaPredicted RBP8.76□□□□□ -1.01
LIG1-213ENST00000596672 RENP00797 406 aa8.76□□□□□ -1.01
LIG1-213ENST00000596672 CST1P01037 141 aa8.76□□□□□ -1.01
LIG1-213ENST00000596672 SLC2A1P11166 492 aa8.76□□□□□ -1.01
LIG1-213ENST00000596672 TUBG1P23258 451 aa8.76□□□□□ -1.01
LIG1-213ENST00000596672 TMEM155Q4W5P6 130 aa8.76□□□□□ -1.01
LIG1-213ENST00000596672 GLYATL3Q5SZD4 288 aa8.76□□□□□ -1.01
LIG1-213ENST00000596672 LIPNQ5VXI9 398 aa8.76□□□□□ -1.01
LIG1-213ENST00000596672 ARL9Q6T311 187 aa8.76□□□□□ -1.01
LIG1-213ENST00000596672 IZUMO2Q6UXV1 221 aa8.76□□□□□ -1.01
LIG1-213ENST00000596672 UNQ6126/PRO20091Q6UXV3 157 aa8.76□□□□□ -1.01
LIG1-213ENST00000596672 ZNF841Q6ZN19 808 aa8.76□□□□□ -1.01
LIG1-213ENST00000596672 PRSS45Q7RTY3 260 aa8.76□□□□□ -1.01
LIG1-213ENST00000596672 PEG10Q86TG7 708 aaKnown RBP8.76□□□□□ -1.01
LIG1-213ENST00000596672 HS3ST5Q8IZT8 346 aa8.76□□□□□ -1.01
LIG1-213ENST00000596672 AQP11Q8NBQ7 271 aa8.76□□□□□ -1.01
LIG1-213ENST00000596672 OR4M2Q8NGB6 313 aa8.76□□□□□ -1.01
LIG1-213ENST00000596672 ST7LQ8TDW4 575 aa8.76□□□□□ -1.01
LIG1-213ENST00000596672 EME1Q96AY2 570 aa8.76□□□□□ -1.01
LIG1-213ENST00000596672 PITX2Q99697 317 aa8.76□□□□□ -1.01
LIG1-213ENST00000596672 CIB1Q99828 191 aa8.76□□□□□ -1.01
LIG1-213ENST00000596672 ATF6BQ99941 703 aa8.76□□□□□ -1.01
LIG1-213ENST00000596672 TMEM246Q9BRR3 403 aa8.76□□□□□ -1.01
LIG1-213ENST00000596672 TSSK6Q9BXA6 273 aa8.76□□□□□ -1.01
LIG1-213ENST00000596672 NTN4Q9HB63 628 aa8.76□□□□□ -1.01
LIG1-213ENST00000596672 TUBG2Q9NRH3 451 aa8.76□□□□□ -1.01
LIG1-213ENST00000596672 DDX28Q9NUL7 540 aaKnown RBP8.76□□□□□ -1.01
LIG1-213ENST00000596672 POLR1DQ9Y2S0 133 aa8.76□□□□□ -1.01
LIG1-213ENST00000596672 INSIG2Q9Y5U4 225 aa8.76□□□□□ -1.01
LIG1-213ENST00000596672 PPIAL4EA0A075B759 164 aa8.75□□□□□ -1.01
LIG1-213ENST00000596672 IGHV3OR16-10A0A075B7F0 116 aa8.75□□□□□ -1.01
LIG1-213ENST00000596672 PPIAL4CA0A0B4J2A2 164 aa8.75□□□□□ -1.01
LIG1-213ENST00000596672 FAM183AA6NL82 134 aa8.75□□□□□ -1.01
LIG1-213ENST00000596672 PPIAL4DF5H284 164 aa8.75□□□□□ -1.01
LIG1-213ENST00000596672 J3QLI3 93 aa8.75□□□□□ -1.01
LIG1-213ENST00000596672 J3QW42 95 aa8.75□□□□□ -1.01
LIG1-213ENST00000596672 FAM20BO75063 409 aa8.75□□□□□ -1.01
LIG1-213ENST00000596672 CCNB2O95067 398 aa8.75□□□□□ -1.01
LIG1-213ENST00000596672 LCATP04180 440 aa8.75□□□□□ -1.01
LIG1-213ENST00000596672 PPIAL4FP0DN26 164 aa8.75□□□□□ -1.01
LIG1-213ENST00000596672 IGHV4-38-2P0DP08 117 aa8.75□□□□□ -1.01
LIG1-213ENST00000596672 SPI1P17947 270 aa8.75□□□□□ -1.01
LIG1-213ENST00000596672 CFPP27918 469 aa8.75□□□□□ -1.01
LIG1-213ENST00000596672 RGS6P49758 472 aa8.75□□□□□ -1.01
LIG1-213ENST00000596672 PAX8Q06710 450 aa8.75□□□□□ -1.01
LIG1-213ENST00000596672 SLC3A1Q07837 685 aa8.75□□□□□ -1.01
LIG1-213ENST00000596672 ZNF154Q13106 437 aa8.75□□□□□ -1.01
LIG1-213ENST00000596672 MICAQ29983 383 aa8.75□□□□□ -1.01
LIG1-213ENST00000596672 KLHL12Q53G59 568 aa8.75□□□□□ -1.01
LIG1-213ENST00000596672 OR2T5Q6IEZ7 315 aa8.75□□□□□ -1.01
LIG1-213ENST00000596672 ZBTB49Q6ZSB9 765 aa8.75□□□□□ -1.01
LIG1-213ENST00000596672 ZNF826PQ6ZT77 177 aa8.75□□□□□ -1.01
LIG1-213ENST00000596672 WDR86Q86TI4 376 aa8.75□□□□□ -1.01
LIG1-213ENST00000596672 C11orf53Q8IXP5 236 aa8.75□□□□□ -1.01
LIG1-213ENST00000596672 FGFRL1Q8N441 504 aa8.75□□□□□ -1.01
LIG1-213ENST00000596672 OR13G1Q8NGZ3 307 aa8.75□□□□□ -1.01
LIG1-213ENST00000596672 OR2T29Q8NH02 315 aa8.75□□□□□ -1.01
LIG1-213ENST00000596672 DNAJC9Q8WXX5 260 aa8.75□□□□□ -1.01
LIG1-213ENST00000596672 DUX5Q96PT3 197 aa8.75□□□□□ -1.01
LIG1-213ENST00000596672 SLC29A1Q99808 456 aa8.75□□□□□ -1.01
LIG1-213ENST00000596672 CDADC1Q9BWV3 514 aa8.75□□□□□ -1.01
LIG1-213ENST00000596672 DGCR6LQ9BY27 220 aa8.75□□□□□ -1.01
LIG1-213ENST00000596672 CTSZQ9UBR2 303 aa8.75□□□□□ -1.01
LIG1-213ENST00000596672 DNAJB9Q9UBS3 223 aa8.75□□□□□ -1.01
LIG1-213ENST00000596672 TMCC3Q9ULS5 477 aa8.75□□□□□ -1.01
LIG1-213ENST00000596672 PCDHB10Q9UN67 800 aa8.75□□□□□ -1.01
LIG1-213ENST00000596672 LRRC42Q9Y546 428 aa8.75□□□□□ -1.01
LIG1-213ENST00000596672 A0A0A6YYJ9 748 aa8.74□□□□□ -1.01
LIG1-213ENST00000596672 TMEM89A2RUT3 159 aa8.74□□□□□ -1.01
LIG1-213ENST00000596672 CD300LBA8K4G0 201 aa8.74□□□□□ -1.01
LIG1-213ENST00000596672 C22orf46C9J442 243 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms