RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 SRP9P49458 86 aaKnown RBP10.94□□□□□ -0.66
LIG1-212ENST00000596549 GK3PQ14409 553 aa10.94□□□□□ -0.66
LIG1-212ENST00000596549 ZNF181Q2M3W8 571 aa10.94□□□□□ -0.66
LIG1-212ENST00000596549 TEX30Q5JUR7 227 aa10.94□□□□□ -0.66
LIG1-212ENST00000596549 SLC27A4Q6P1M0 643 aa10.94□□□□□ -0.66
LIG1-212ENST00000596549 DRAM2Q6UX65 266 aa10.94□□□□□ -0.66
LIG1-212ENST00000596549 MRPL21Q7Z2W9 205 aaKnown RBP10.94□□□□□ -0.66
LIG1-212ENST00000596549 AQP12AQ8IXF9 295 aa10.94□□□□□ -0.66
LIG1-212ENST00000596549 KLHL36Q8N4N3 616 aa10.94□□□□□ -0.66
LIG1-212ENST00000596549 TEX47Q8TBZ9 253 aa10.94□□□□□ -0.66
LIG1-212ENST00000596549 GIPC3Q8TF64 312 aa10.94□□□□□ -0.66
LIG1-212ENST00000596549 SPTSSAQ969W0 71 aa10.94□□□□□ -0.66
LIG1-212ENST00000596549 SLC7A6OSQ96CW6 309 aaPredicted RBP10.94□□□□□ -0.66
LIG1-212ENST00000596549 AMELYQ99218 206 aa10.94□□□□□ -0.66
LIG1-212ENST00000596549 COPS4Q9BT78 406 aa10.94□□□□□ -0.66
LIG1-212ENST00000596549 C7orf69Q9H7B7 122 aa10.94□□□□□ -0.66
LIG1-212ENST00000596549 TMEM100Q9NV29 134 aa10.94□□□□□ -0.66
LIG1-212ENST00000596549 PCDHB10Q9UN67 800 aa10.94□□□□□ -0.66
LIG1-212ENST00000596549 DOCK11Q5JSL3 2073 aa10.94□□□□□ -0.66
LIG1-212ENST00000596549 A0A0A6YYJ9 748 aa10.93□□□□□ -0.66
LIG1-212ENST00000596549 CD300LBA8K4G0 201 aa10.93□□□□□ -0.66
LIG1-212ENST00000596549 H3BN98 237 aa10.93□□□□□ -0.66
LIG1-212ENST00000596549 IFNGP01579 166 aa10.93□□□□□ -0.66
LIG1-212ENST00000596549 ZNF12P17014 697 aa10.93□□□□□ -0.66
LIG1-212ENST00000596549 PRKXP51817 358 aa10.93□□□□□ -0.66
LIG1-212ENST00000596549 HILS1P60008 231 aa10.93□□□□□ -0.66
LIG1-212ENST00000596549 PAX2Q02962 417 aa10.93□□□□□ -0.66
LIG1-212ENST00000596549 MALLQ13021 153 aa10.93□□□□□ -0.66
LIG1-212ENST00000596549 MPPED2Q15777 294 aa10.93□□□□□ -0.66
LIG1-212ENST00000596549 ZNF404Q494X3 552 aa10.93□□□□□ -0.66
LIG1-212ENST00000596549 SPATC1Q76KD6 591 aa10.93□□□□□ -0.66
LIG1-212ENST00000596549 MUC20Q8N307 709 aaPredicted RBP10.93□□□□□ -0.66
LIG1-212ENST00000596549 C19orf18Q8NEA5 215 aa10.93□□□□□ -0.66
LIG1-212ENST00000596549 OR6N2Q8NGY6 317 aa10.93□□□□□ -0.66
LIG1-212ENST00000596549 BCAS4Q8TDM0 211 aa10.93□□□□□ -0.66
LIG1-212ENST00000596549 POP5Q969H6 163 aaKnown RBP10.93□□□□□ -0.66
LIG1-212ENST00000596549 DACT3Q96B18 629 aaPredicted RBP10.93□□□□□ -0.66
LIG1-212ENST00000596549 KCNJ15Q99712 375 aa10.93□□□□□ -0.66
LIG1-212ENST00000596549 SLC6A7Q99884 636 aa10.93□□□□□ -0.66
LIG1-212ENST00000596549 TMEM246Q9BRR3 403 aa10.93□□□□□ -0.66
LIG1-212ENST00000596549 ADAT1Q9BUB4 502 aaKnown RBP10.93□□□□□ -0.66
LIG1-212ENST00000596549 MARCH7Q9H992 704 aa10.93□□□□□ -0.66
LIG1-212ENST00000596549 TMEM165Q9HC07 324 aa10.93□□□□□ -0.66
LIG1-212ENST00000596549 INSIG2Q9Y5U4 225 aa10.93□□□□□ -0.66
LIG1-212ENST00000596549 ANK2Q01484 3957 aa10.92□□□□□ -0.66
LIG1-212ENST00000596549 TCRBV3S1A0A5B6 114 aa10.92□□□□□ -0.66
LIG1-212ENST00000596549 RIIAD1A6NNX1 92 aa10.92□□□□□ -0.66
LIG1-212ENST00000596549 IFNL4K9M1U5 179 aa10.92□□□□□ -0.66
LIG1-212ENST00000596549 ZNF593O00488 134 aaPredicted RBP10.92□□□□□ -0.66
LIG1-212ENST00000596549 FAM20BO75063 409 aa10.92□□□□□ -0.66
LIG1-212ENST00000596549 PTBP3O95758 552 aaKnown RBP10.92□□□□□ -0.66
LIG1-212ENST00000596549 WNT2P09544 360 aa10.92□□□□□ -0.66
LIG1-212ENST00000596549 RPS2P15880 293 aaKnown RBP10.92□□□□□ -0.66
LIG1-212ENST00000596549 CA6P23280 308 aa10.92□□□□□ -0.66
LIG1-212ENST00000596549 ZNF154Q13106 437 aa10.92□□□□□ -0.66
LIG1-212ENST00000596549 EIF2B1Q14232 305 aaKnown RBP10.92□□□□□ -0.66
LIG1-212ENST00000596549 FLOT2Q14254 428 aa10.92□□□□□ -0.66
LIG1-212ENST00000596549 TUSC1Q2TAM9 212 aa10.92□□□□□ -0.66
LIG1-212ENST00000596549 DNAL1Q4LDG9 190 aa10.92□□□□□ -0.66
LIG1-212ENST00000596549 KLF17Q5JT82 389 aaPredicted RBP10.92□□□□□ -0.66
LIG1-212ENST00000596549 PRSS45Q7RTY3 260 aa10.92□□□□□ -0.66
LIG1-212ENST00000596549 DPY19L4Q7Z388 723 aa10.92□□□□□ -0.66
LIG1-212ENST00000596549 KLBQ86Z14 1044 aa10.92□□□□□ -0.66
LIG1-212ENST00000596549 TIGD4Q8IY51 512 aa10.92□□□□□ -0.66
LIG1-212ENST00000596549 TEX29Q8N6K0 151 aa10.92□□□□□ -0.66
LIG1-212ENST00000596549 CELF2-AS1Q8N7Q2 184 aa10.92□□□□□ -0.66
LIG1-212ENST00000596549 OR56B2PQ8NGI1 322 aa10.92□□□□□ -0.66
LIG1-212ENST00000596549 NANPQ8TBE9 248 aa10.92□□□□□ -0.66
LIG1-212ENST00000596549 Q8TCH9 128 aa10.92□□□□□ -0.66
LIG1-212ENST00000596549 C22orf15Q8WYQ4 148 aa10.92□□□□□ -0.66
LIG1-212ENST00000596549 ABHD6Q9BV23 337 aa10.92□□□□□ -0.66
LIG1-212ENST00000596549 ESM1Q9NQ30 184 aa10.92□□□□□ -0.66
LIG1-212ENST00000596549 CENPMQ9NSP4 180 aa10.92□□□□□ -0.66
LIG1-212ENST00000596549 PDP1Q9P0J1 537 aaPredicted RBP10.92□□□□□ -0.66
LIG1-212ENST00000596549 POMPQ9Y244 141 aa10.92□□□□□ -0.66
LIG1-212ENST00000596549 LRCH1Q9Y2L9 728 aa10.92□□□□□ -0.66
LIG1-212ENST00000596549 FKBP6O75344 327 aa10.91□□□□□ -0.66
LIG1-212ENST00000596549 GLCEO94923 617 aa10.91□□□□□ -0.66
LIG1-212ENST00000596549 FSTL3O95633 263 aa10.91□□□□□ -0.66
LIG1-212ENST00000596549 CX3CR1P49238 355 aa10.91□□□□□ -0.66
LIG1-212ENST00000596549 SCGB2A2Q13296 93 aa10.91□□□□□ -0.66
LIG1-212ENST00000596549 OR8G1Q15617 311 aa10.91□□□□□ -0.66
LIG1-212ENST00000596549 KLHL12Q53G59 568 aa10.91□□□□□ -0.66
LIG1-212ENST00000596549 ESCO2Q56NI9 601 aa10.91□□□□□ -0.66
LIG1-212ENST00000596549 LYPD2Q6UXB3 125 aa10.91□□□□□ -0.66
LIG1-212ENST00000596549 USP43Q70EL4 1123 aa10.91□□□□□ -0.66
LIG1-212ENST00000596549 SPATA24Q86W54 205 aa10.91□□□□□ -0.66
LIG1-212ENST00000596549 ERI1Q8IV48 349 aaKnown RBP10.91□□□□□ -0.66
LIG1-212ENST00000596549 ZNF418Q8TF45 676 aaPredicted RBP10.91□□□□□ -0.66
LIG1-212ENST00000596549 RNF133Q8WVZ7 376 aa10.91□□□□□ -0.66
LIG1-212ENST00000596549 SPRYD4Q8WW59 207 aaPredicted RBP10.91□□□□□ -0.66
LIG1-212ENST00000596549 SPSB4Q96A44 273 aa10.91□□□□□ -0.66
LIG1-212ENST00000596549 INTS14Q96SY0 518 aa10.91□□□□□ -0.66
LIG1-212ENST00000596549 SSBP3Q9BWW4 388 aaPredicted RBP10.91□□□□□ -0.66
LIG1-212ENST00000596549 UFSP2Q9NUQ7 469 aa10.91□□□□□ -0.66
LIG1-212ENST00000596549 hCG_38984A0A1B0GV85 526 aa10.9□□□□□ -0.66
LIG1-212ENST00000596549 GGT3PA6NGU5 568 aa10.9□□□□□ -0.66
LIG1-212ENST00000596549 GYG2O15488 501 aa10.9□□□□□ -0.66
LIG1-212ENST00000596549 XRCC2O43543 280 aa10.9□□□□□ -0.66
LIG1-212ENST00000596549 SELENOFO60613 162 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms