RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 HEXAP06865 529 aa9.43□□□□□ -0.9
LIG1-211ENST00000596457 SELEP16581 610 aa9.43□□□□□ -0.9
LIG1-211ENST00000596457 ALOX5APP20292 161 aa9.43□□□□□ -0.9
LIG1-211ENST00000596457 TNFSF4P23510 183 aa9.43□□□□□ -0.9
LIG1-211ENST00000596457 PEX2P28328 305 aa9.43□□□□□ -0.9
LIG1-211ENST00000596457 OTX1P32242 354 aaPredicted RBP9.43□□□□□ -0.9
LIG1-211ENST00000596457 CXCR4P61073 352 aa9.43□□□□□ -0.9
LIG1-211ENST00000596457 ZNF92Q03936 586 aa9.43□□□□□ -0.9
LIG1-211ENST00000596457 SPRNQ5BIV9 151 aa9.43□□□□□ -0.9
LIG1-211ENST00000596457 ZMAT1Q5H9K5 638 aa9.43□□□□□ -0.9
LIG1-211ENST00000596457 Q6ZR03 302 aa9.43□□□□□ -0.9
LIG1-211ENST00000596457 COLCA1Q6ZS62 124 aa9.43□□□□□ -0.9
LIG1-211ENST00000596457 ZNF786Q8N393 782 aa9.43□□□□□ -0.9
LIG1-211ENST00000596457 RFLNBQ8N5W9 214 aa9.43□□□□□ -0.9
LIG1-211ENST00000596457 OR8G5Q8NG78 346 aa9.43□□□□□ -0.9
LIG1-211ENST00000596457 OR10H4Q8NGA5 316 aa9.43□□□□□ -0.9
LIG1-211ENST00000596457 CYGBQ8WWM9 190 aa9.43□□□□□ -0.9
LIG1-211ENST00000596457 ELMOD3Q96FG2 381 aa9.43□□□□□ -0.9
LIG1-211ENST00000596457 APOL4Q9BPW4 351 aa9.43□□□□□ -0.9
LIG1-211ENST00000596457 EGLN1Q9GZT9 426 aa9.43□□□□□ -0.9
LIG1-211ENST00000596457 NARFLQ9H6Q4 476 aa9.43□□□□□ -0.9
LIG1-211ENST00000596457 SP140LQ9H930 580 aa9.43□□□□□ -0.9
LIG1-211ENST00000596457 SAP30LQ9HAJ7 183 aa9.43□□□□□ -0.9
LIG1-211ENST00000596457 ADGRL4Q9HBW9 690 aa9.43□□□□□ -0.9
LIG1-211ENST00000596457 FAM118AQ9NWS6 357 aa9.43□□□□□ -0.9
LIG1-211ENST00000596457 SMPD3Q9NY59 655 aaPredicted RBP9.43□□□□□ -0.9
LIG1-211ENST00000596457 ZDHHC8Q9ULC8 765 aa9.43□□□□□ -0.9
LIG1-211ENST00000596457 TMEM14AQ9Y6G1 99 aa9.43□□□□□ -0.9
LIG1-211ENST00000596457 FBN1P35555 2871 aaKnown RBP9.43□□□□□ -0.9
LIG1-211ENST00000596457 IGHV1-69-2A0A0G2JMI3 117 aa9.42□□□□□ -0.9
LIG1-211ENST00000596457 IGHV3-64DA0A0J9YX35 117 aa9.42□□□□□ -0.9
LIG1-211ENST00000596457 IQCF6A8MYZ5 107 aa9.42□□□□□ -0.9
LIG1-211ENST00000596457 H0YHG0 523 aa9.42□□□□□ -0.9
LIG1-211ENST00000596457 NDUFS8O00217 210 aa9.42□□□□□ -0.9
LIG1-211ENST00000596457 PPIHO43447 177 aaKnown RBP9.42□□□□□ -0.9
LIG1-211ENST00000596457 XRCC2O43543 280 aa9.42□□□□□ -0.9
LIG1-211ENST00000596457 LILRA1O75019 489 aa9.42□□□□□ -0.9
LIG1-211ENST00000596457 LY6G6DO95868 133 aa9.42□□□□□ -0.9
LIG1-211ENST00000596457 HLA-DPB1P04440 258 aa9.42□□□□□ -0.9
LIG1-211ENST00000596457 SBK2P0C263 348 aa9.42□□□□□ -0.9
LIG1-211ENST00000596457 HTR1FP30939 366 aa9.42□□□□□ -0.9
LIG1-211ENST00000596457 RBMXP38159 391 aaKnown RBP9.42□□□□□ -0.9
LIG1-211ENST00000596457 NR4A2P43354 598 aa9.42□□□□□ -0.9
LIG1-211ENST00000596457 GPR6P46095 362 aaPredicted RBP9.42□□□□□ -0.9
LIG1-211ENST00000596457 HNRNPA0Q13151 305 aaKnown RBP9.42□□□□□ -0.9
LIG1-211ENST00000596457 CDK5R2Q13319 367 aa9.42□□□□□ -0.9
LIG1-211ENST00000596457 AVPI1Q5T686 147 aa9.42□□□□□ -0.9
LIG1-211ENST00000596457 ZNF322Q6U7Q0 402 aaPredicted RBP9.42□□□□□ -0.9
LIG1-211ENST00000596457 OR10AD1Q8NGE0 317 aa9.42□□□□□ -0.9
LIG1-211ENST00000596457 OR13G1Q8NGZ3 307 aa9.42□□□□□ -0.9
LIG1-211ENST00000596457 ITLN1Q8WWA0 313 aa9.42□□□□□ -0.9
LIG1-211ENST00000596457 TRUB1Q8WWH5 349 aaKnown RBP9.42□□□□□ -0.9
LIG1-211ENST00000596457 ASB17Q8WXJ9 295 aa9.42□□□□□ -0.9
LIG1-211ENST00000596457 CCL17Q92583 94 aa9.42□□□□□ -0.9
LIG1-211ENST00000596457 RFKQ969G6 155 aa9.42□□□□□ -0.9
LIG1-211ENST00000596457 SGK3Q96BR1 496 aa9.42□□□□□ -0.9
LIG1-211ENST00000596457 REEP6Q96HR9 211 aa9.42□□□□□ -0.9
LIG1-211ENST00000596457 DIRC2Q96SL1 478 aa9.42□□□□□ -0.9
LIG1-211ENST00000596457 MROQ9BYG7 248 aa9.42□□□□□ -0.9
LIG1-211ENST00000596457 BPESC1Q9GZL8 116 aa9.42□□□□□ -0.9
LIG1-211ENST00000596457 OR10A2Q9H208 303 aa9.42□□□□□ -0.9
LIG1-211ENST00000596457 DCLRE1BQ9H816 532 aa9.42□□□□□ -0.9
LIG1-211ENST00000596457 ZNF275Q9NSD4 429 aaPredicted RBP9.42□□□□□ -0.9
LIG1-211ENST00000596457 TMEM100Q9NV29 134 aa9.42□□□□□ -0.9
LIG1-211ENST00000596457 CLN6Q9NWW5 311 aa9.42□□□□□ -0.9
LIG1-211ENST00000596457 NKIRAS2Q9NYR9 191 aa9.42□□□□□ -0.9
LIG1-211ENST00000596457 NKX1-2Q9UD57 310 aaPredicted RBP9.42□□□□□ -0.9
LIG1-211ENST00000596457 CGGBP1Q9UFW8 167 aaPredicted RBP9.42□□□□□ -0.9
LIG1-211ENST00000596457 CACNG2Q9Y698 323 aa9.42□□□□□ -0.9
LIG1-211ENST00000596457 ATRQ13535 2644 aa9.42□□□□□ -0.9
LIG1-211ENST00000596457 FN1P02751 2386 aaKnown RBP9.42□□□□□ -0.9
LIG1-211ENST00000596457 TMEM269A0A1B0GVZ9 245 aa9.41□□□□□ -0.9
LIG1-211ENST00000596457 LRP5LA4QPB2 252 aa9.41□□□□□ -0.9
LIG1-211ENST00000596457 PRR32B1ATL7 298 aa9.41□□□□□ -0.9
LIG1-211ENST00000596457 VWC2LB2RUY7 222 aa9.41□□□□□ -0.9
LIG1-211ENST00000596457 PHYHO14832 338 aa9.41□□□□□ -0.9
LIG1-211ENST00000596457 RPP14O95059 124 aaKnown RBP9.41□□□□□ -0.9
LIG1-211ENST00000596457 CLIC3O95833 236 aa9.41□□□□□ -0.9
LIG1-211ENST00000596457 ACHEP22303 614 aa9.41□□□□□ -0.9
LIG1-211ENST00000596457 USF1P22415 310 aaPredicted RBP9.41□□□□□ -0.9
LIG1-211ENST00000596457 CA6P23280 308 aa9.41□□□□□ -0.9
LIG1-211ENST00000596457 CRYBB2P43320 205 aa9.41□□□□□ -0.9
LIG1-211ENST00000596457 RIDAP52758 137 aaKnown RBP9.41□□□□□ -0.9
LIG1-211ENST00000596457 SNRPGP62308 76 aaKnown RBP9.41□□□□□ -0.9
LIG1-211ENST00000596457 IL5RAQ01344 420 aa9.41□□□□□ -0.9
LIG1-211ENST00000596457 MVKQ03426 396 aa9.41□□□□□ -0.9
LIG1-211ENST00000596457 POU4F2Q12837 409 aa9.41□□□□□ -0.9
LIG1-211ENST00000596457 OR8G1Q15617 311 aa9.41□□□□□ -0.9
LIG1-211ENST00000596457 HFEQ30201 348 aa9.41□□□□□ -0.9
LIG1-211ENST00000596457 FAM209AQ5JX71 171 aa9.41□□□□□ -0.9
LIG1-211ENST00000596457 MEDAGQ5VYS4 303 aa9.41□□□□□ -0.9
LIG1-211ENST00000596457 PLEKHG7Q6ZR37 379 aa9.41□□□□□ -0.9
LIG1-211ENST00000596457 ZNF771Q7L3S4 317 aaPredicted RBP9.41□□□□□ -0.9
LIG1-211ENST00000596457 COMMD2Q86X83 199 aa9.41□□□□□ -0.9
LIG1-211ENST00000596457 ENTHD1Q8IYW4 607 aa9.41□□□□□ -0.9
LIG1-211ENST00000596457 ZNF679Q8IYX0 411 aa9.41□□□□□ -0.9
LIG1-211ENST00000596457 YIPF7Q8N8F6 280 aa9.41□□□□□ -0.9
LIG1-211ENST00000596457 ZNF540Q8NDQ6 660 aa9.41□□□□□ -0.9
LIG1-211ENST00000596457 DVL3Q92997 716 aaPredicted RBP9.41□□□□□ -0.9
LIG1-211ENST00000596457 RNFT2Q96EX2 444 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms