RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 GYPAP02724 150 aa8.21□□□□□ -1.1
LIG1-209ENST00000596104 LCATP04180 440 aa8.21□□□□□ -1.1
LIG1-209ENST00000596104 ANOS1P23352 680 aa8.21□□□□□ -1.1
LIG1-209ENST00000596104 CRABP1P29762 137 aa8.21□□□□□ -1.1
LIG1-209ENST00000596104 GGT2P36268 569 aa8.21□□□□□ -1.1
LIG1-209ENST00000596104 CENPAP49450 140 aa8.21□□□□□ -1.1
LIG1-209ENST00000596104 TRAP1Q12931 704 aaKnown RBP8.21□□□□□ -1.1
LIG1-209ENST00000596104 ECH1Q13011 328 aa8.21□□□□□ -1.1
LIG1-209ENST00000596104 MALLQ13021 153 aa8.21□□□□□ -1.1
LIG1-209ENST00000596104 DGCR6Q14129 220 aa8.21□□□□□ -1.1
LIG1-209ENST00000596104 OR8B8Q15620 311 aa8.21□□□□□ -1.1
LIG1-209ENST00000596104 C2orf68Q2NKX9 166 aa8.21□□□□□ -1.1
LIG1-209ENST00000596104 BEAN1Q3B7T3 259 aa8.21□□□□□ -1.1
LIG1-209ENST00000596104 KPRPQ5T749 579 aaPredicted RBP8.21□□□□□ -1.1
LIG1-209ENST00000596104 DNM1P34Q6PK57 102 aa8.21□□□□□ -1.1
LIG1-209ENST00000596104 PGAP1Q75T13 922 aa8.21□□□□□ -1.1
LIG1-209ENST00000596104 BTN2A1Q7KYR7 527 aa8.21□□□□□ -1.1
LIG1-209ENST00000596104 RRM2BQ7LG56 351 aa8.21□□□□□ -1.1
LIG1-209ENST00000596104 FAM90A1Q86YD7 464 aa8.21□□□□□ -1.1
LIG1-209ENST00000596104 LINC00346Q8IVM7 164 aa8.21□□□□□ -1.1
LIG1-209ENST00000596104 PDZD9Q8IXQ8 264 aa8.21□□□□□ -1.1
LIG1-209ENST00000596104 SLC15A3Q8IY34 581 aa8.21□□□□□ -1.1
LIG1-209ENST00000596104 GCSAMQ8N6F7 178 aa8.21□□□□□ -1.1
LIG1-209ENST00000596104 BOLLQ8N9W6 283 aaKnown RBP8.21□□□□□ -1.1
LIG1-209ENST00000596104 SCCPDHQ8NBX0 429 aa8.21□□□□□ -1.1
LIG1-209ENST00000596104 SPRYD4Q8WW59 207 aaPredicted RBP8.21□□□□□ -1.1
LIG1-209ENST00000596104 LRTOMTQ8WZ04 291 aa8.21□□□□□ -1.1
LIG1-209ENST00000596104 HSH2DQ96JZ2 352 aa8.21□□□□□ -1.1
LIG1-209ENST00000596104 PITX2Q99697 317 aa8.21□□□□□ -1.1
LIG1-209ENST00000596104 ATF6BQ99941 703 aa8.21□□□□□ -1.1
LIG1-209ENST00000596104 ADAT1Q9BUB4 502 aaKnown RBP8.21□□□□□ -1.1
LIG1-209ENST00000596104 SLC22A4Q9H015 551 aa8.21□□□□□ -1.1
LIG1-209ENST00000596104 DPAGT1Q9H3H5 408 aa8.21□□□□□ -1.1
LIG1-209ENST00000596104 TRIM36Q9NQ86 728 aa8.21□□□□□ -1.1
LIG1-209ENST00000596104 SAR1AQ9NR31 198 aa8.21□□□□□ -1.1
LIG1-209ENST00000596104 GID8Q9NWU2 228 aa8.21□□□□□ -1.1
LIG1-209ENST00000596104 ZNRD1Q9P1U0 126 aa8.21□□□□□ -1.1
LIG1-209ENST00000596104 KAAG1Q9UBP8 84 aa8.21□□□□□ -1.1
LIG1-209ENST00000596104 CYB5R1Q9UHQ9 305 aa8.21□□□□□ -1.1
LIG1-209ENST00000596104 RPUSD1Q9UJJ7 312 aaKnown RBP8.21□□□□□ -1.1
LIG1-209ENST00000596104 NOP16Q9Y3C1 178 aaKnown RBP8.21□□□□□ -1.1
LIG1-209ENST00000596104 KPTNQ9Y664 436 aa8.21□□□□□ -1.1
LIG1-209ENST00000596104 ENPP4Q9Y6X5 453 aa8.21□□□□□ -1.1
LIG1-209ENST00000596104 ZNF816-ZNF321PA0A0X1KG74 233 aa8.2□□□□□ -1.1
LIG1-209ENST00000596104 LOC100653049A0A140TA62 436 aa8.2□□□□□ -1.1
LIG1-209ENST00000596104 G3V4G9 280 aa8.2□□□□□ -1.1
LIG1-209ENST00000596104 CXCR6O00574 342 aa8.2□□□□□ -1.1
LIG1-209ENST00000596104 DVL1O14640 695 aa8.2□□□□□ -1.1
LIG1-209ENST00000596104 GMDSO60547 372 aa8.2□□□□□ -1.1
LIG1-209ENST00000596104 KRT34O76011 436 aa8.2□□□□□ -1.1
LIG1-209ENST00000596104 ECDO95905 644 aaPredicted RBP8.2□□□□□ -1.1
LIG1-209ENST00000596104 LHBP01229 141 aa8.2□□□□□ -1.1
LIG1-209ENST00000596104 H1F0P07305 194 aaKnown RBP8.2□□□□□ -1.1
LIG1-209ENST00000596104 RPS6KA3P51812 740 aa8.2□□□□□ -1.1
LIG1-209ENST00000596104 ZNF92Q03936 586 aa8.2□□□□□ -1.1
LIG1-209ENST00000596104 EGR3Q06889 387 aa8.2□□□□□ -1.1
LIG1-209ENST00000596104 SEC23BQ15437 767 aa8.2□□□□□ -1.1
LIG1-209ENST00000596104 MAPRE2Q15555 327 aa8.2□□□□□ -1.1
LIG1-209ENST00000596104 SNAI3Q3KNW1 292 aa8.2□□□□□ -1.1
LIG1-209ENST00000596104 CDONQ4KMG0 1287 aa8.2□□□□□ -1.1
LIG1-209ENST00000596104 TEX36Q5VZQ5 186 aa8.2□□□□□ -1.1
LIG1-209ENST00000596104 DHRS7BQ6IAN0 325 aaPredicted RBP8.2□□□□□ -1.1
LIG1-209ENST00000596104 METAP1DQ6UB28 335 aaPredicted RBP8.2□□□□□ -1.1
LIG1-209ENST00000596104 ZNF826PQ6ZT77 177 aa8.2□□□□□ -1.1
LIG1-209ENST00000596104 FKBP9P1Q75LS8 142 aa8.2□□□□□ -1.1
LIG1-209ENST00000596104 MRPL21Q7Z2W9 205 aaKnown RBP8.2□□□□□ -1.1
LIG1-209ENST00000596104 ZBTB46Q86UZ6 589 aa8.2□□□□□ -1.1
LIG1-209ENST00000596104 FGFRL1Q8N441 504 aa8.2□□□□□ -1.1
LIG1-209ENST00000596104 LY6G5BQ8NDX9 201 aa8.2□□□□□ -1.1
LIG1-209ENST00000596104 MAP6Q96JE9 813 aa8.2□□□□□ -1.1
LIG1-209ENST00000596104 NMNAT3Q96T66 252 aa8.2□□□□□ -1.1
LIG1-209ENST00000596104 FUZQ9BT04 418 aa8.2□□□□□ -1.1
LIG1-209ENST00000596104 SEMA6AQ9H2E6 1030 aa8.2□□□□□ -1.1
LIG1-209ENST00000596104 CNTD2Q9H8S5 307 aa8.2□□□□□ -1.1
LIG1-209ENST00000596104 SRA1Q9HD15 236 aaKnown RBP8.2□□□□□ -1.1
LIG1-209ENST00000596104 MRGBPQ9NV56 204 aa8.2□□□□□ -1.1
LIG1-209ENST00000596104 C1orf123Q9NWV4 160 aa8.2□□□□□ -1.1
LIG1-209ENST00000596104 VPREB3Q9UKI3 123 aa8.2□□□□□ -1.1
LIG1-209ENST00000596104 TRBV4-1A0A0J9YWV2 114 aa8.19□□□□□ -1.1
LIG1-209ENST00000596104 A0A1B0GVI7 797 aa8.19□□□□□ -1.1
LIG1-209ENST00000596104 A0A1B0GW55 424 aa8.19□□□□□ -1.1
LIG1-209ENST00000596104 UNC119BA6NIH7 251 aa8.19□□□□□ -1.1
LIG1-209ENST00000596104 M0R135 149 aa8.19□□□□□ -1.1
LIG1-209ENST00000596104 ARPC3O15145 178 aa8.19□□□□□ -1.1
LIG1-209ENST00000596104 SERPINA1P01009 418 aa8.19□□□□□ -1.1
LIG1-209ENST00000596104 FBP1P09467 338 aa8.19□□□□□ -1.1
LIG1-209ENST00000596104 CSF1P09603 554 aa8.19□□□□□ -1.1
LIG1-209ENST00000596104 DUX4L2P0CJ85 424 aa8.19□□□□□ -1.1
LIG1-209ENST00000596104 DUX4L3P0CJ86 424 aa8.19□□□□□ -1.1
LIG1-209ENST00000596104 DUX4L4P0CJ87 422 aa8.19□□□□□ -1.1
LIG1-209ENST00000596104 DUX4L5P0CJ88 424 aa8.19□□□□□ -1.1
LIG1-209ENST00000596104 DUX4L6P0CJ89 424 aa8.19□□□□□ -1.1
LIG1-209ENST00000596104 DUX4L7P0CJ90 424 aa8.19□□□□□ -1.1
LIG1-209ENST00000596104 OTX1P32242 354 aaPredicted RBP8.19□□□□□ -1.1
LIG1-209ENST00000596104 TPTEP56180 551 aa8.19□□□□□ -1.1
LIG1-209ENST00000596104 ELF3P78545 371 aaPredicted RBP8.19□□□□□ -1.1
LIG1-209ENST00000596104 LIPEQ05469 1076 aa8.19□□□□□ -1.1
LIG1-209ENST00000596104 POU4F2Q12837 409 aa8.19□□□□□ -1.1
LIG1-209ENST00000596104 SLC36A3Q495N2 470 aa8.19□□□□□ -1.1
LIG1-209ENST00000596104 FGD3Q5JSP0 725 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms