RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 CLDN25C9JDP6 229 aa9.28□□□□□ -0.92
SHKBP1-206ENST00000595523 HLA-DPB1P04440 258 aa9.28□□□□□ -0.92
SHKBP1-206ENST00000595523 CX3CR1P49238 355 aa9.28□□□□□ -0.92
SHKBP1-206ENST00000595523 HCCSP53701 268 aa9.28□□□□□ -0.92
SHKBP1-206ENST00000595523 GRB2P62993 217 aaKnown RBP9.28□□□□□ -0.92
SHKBP1-206ENST00000595523 MALLQ13021 153 aa9.28□□□□□ -0.92
SHKBP1-206ENST00000595523 AADACL4Q5VUY2 407 aa9.28□□□□□ -0.92
SHKBP1-206ENST00000595523 PGAP1Q75T13 922 aa9.28□□□□□ -0.92
SHKBP1-206ENST00000595523 RHOUQ7L0Q8 258 aa9.28□□□□□ -0.92
SHKBP1-206ENST00000595523 SHFQ7M4L6 423 aa9.28□□□□□ -0.92
SHKBP1-206ENST00000595523 RFLNBQ8N5W9 214 aa9.28□□□□□ -0.92
SHKBP1-206ENST00000595523 ZNF283Q8N7M2 679 aa9.28□□□□□ -0.92
SHKBP1-206ENST00000595523 TCEANCQ8N8B7 351 aa9.28□□□□□ -0.92
SHKBP1-206ENST00000595523 ZNF582Q96NG8 517 aaPredicted RBP9.28□□□□□ -0.92
SHKBP1-206ENST00000595523 SIGLEC11Q96RL6 698 aa9.28□□□□□ -0.92
SHKBP1-206ENST00000595523 TEAD3Q99594 435 aa9.28□□□□□ -0.92
SHKBP1-206ENST00000595523 REPIN1Q9BWE0 567 aaKnown RBP9.28□□□□□ -0.92
SHKBP1-206ENST00000595523 OSBPL10Q9BXB5 764 aa9.28□□□□□ -0.92
SHKBP1-206ENST00000595523 GABARAPL3Q9BY60 117 aa9.28□□□□□ -0.92
SHKBP1-206ENST00000595523 TMEM160Q9NX00 188 aa9.28□□□□□ -0.92
SHKBP1-206ENST00000595523 DNAJC27Q9NZQ0 273 aa9.28□□□□□ -0.92
SHKBP1-206ENST00000595523 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.28□□□□□ -0.92
SHKBP1-206ENST00000595523 ZNF319Q9P2F9 582 aa9.28□□□□□ -0.92
SHKBP1-206ENST00000595523 IL19Q9UHD0 177 aa9.28□□□□□ -0.92
SHKBP1-206ENST00000595523 IGHV3-64DA0A0J9YX35 117 aa9.27□□□□□ -0.93
SHKBP1-206ENST00000595523 CD300LBA8K4G0 201 aa9.27□□□□□ -0.93
SHKBP1-206ENST00000595523 F5H5P2 479 aa9.27□□□□□ -0.93
SHKBP1-206ENST00000595523 LMX1BO60663 402 aa9.27□□□□□ -0.93
SHKBP1-206ENST00000595523 TGFAP01135 160 aa9.27□□□□□ -0.93
SHKBP1-206ENST00000595523 ALPLP05186 524 aa9.27□□□□□ -0.93
SHKBP1-206ENST00000595523 LYNP07948 512 aa9.27□□□□□ -0.93
SHKBP1-206ENST00000595523 MRPL3P09001 348 aaKnown RBP9.27□□□□□ -0.93
SHKBP1-206ENST00000595523 SELEP16581 610 aa9.27□□□□□ -0.93
SHKBP1-206ENST00000595523 ALOX5APP20292 161 aa9.27□□□□□ -0.93
SHKBP1-206ENST00000595523 TNFSF4P23510 183 aa9.27□□□□□ -0.93
SHKBP1-206ENST00000595523 SLC15A1P46059 708 aa9.27□□□□□ -0.93
SHKBP1-206ENST00000595523 MMP16P51512 607 aa9.27□□□□□ -0.93
SHKBP1-206ENST00000595523 RPS7P62081 194 aaKnown RBP9.27□□□□□ -0.93
SHKBP1-206ENST00000595523 TAF13Q15543 124 aa9.27□□□□□ -0.93
SHKBP1-206ENST00000595523 FAM166AQ6J272 317 aa9.27□□□□□ -0.93
SHKBP1-206ENST00000595523 ZFP1Q6P2D0 407 aa9.27□□□□□ -0.93
SHKBP1-206ENST00000595523 SLC16A9Q7RTY1 509 aa9.27□□□□□ -0.93
SHKBP1-206ENST00000595523 MRPL21Q7Z2W9 205 aaKnown RBP9.27□□□□□ -0.93
SHKBP1-206ENST00000595523 ZNF454Q8N9F8 522 aa9.27□□□□□ -0.93
SHKBP1-206ENST00000595523 LINC01356Q8N9X3 169 aa9.27□□□□□ -0.93
SHKBP1-206ENST00000595523 OR13G1Q8NGZ3 307 aa9.27□□□□□ -0.93
SHKBP1-206ENST00000595523 TMEM163Q8TC26 289 aa9.27□□□□□ -0.93
SHKBP1-206ENST00000595523 SPSB4Q96A44 273 aa9.27□□□□□ -0.93
SHKBP1-206ENST00000595523 MEGF10Q96KG7 1140 aa9.27□□□□□ -0.93
SHKBP1-206ENST00000595523 IL4I1Q96RQ9 567 aa9.27□□□□□ -0.93
SHKBP1-206ENST00000595523 TEX12Q9BXU0 123 aa9.27□□□□□ -0.93
SHKBP1-206ENST00000595523 TOR3AQ9H497 397 aa9.27□□□□□ -0.93
SHKBP1-206ENST00000595523 GCM1Q9NP62 436 aa9.27□□□□□ -0.93
SHKBP1-206ENST00000595523 TMEM106BQ9NUM4 274 aa9.27□□□□□ -0.93
SHKBP1-206ENST00000595523 COPS3Q9UNS2 423 aa9.27□□□□□ -0.93
SHKBP1-206ENST00000595523 E9PQ18 207 aa9.26□□□□□ -0.93
SHKBP1-206ENST00000595523 EI24O14681 340 aa9.26□□□□□ -0.93
SHKBP1-206ENST00000595523 IGHV2-70P01814 119 aa9.26□□□□□ -0.93
SHKBP1-206ENST00000595523 IGHV2-5P01817 119 aa9.26□□□□□ -0.93
SHKBP1-206ENST00000595523 ANXA2P07355 339 aaKnown RBP9.26□□□□□ -0.93
SHKBP1-206ENST00000595523 H2BFMP0C1H6 154 aa9.26□□□□□ -0.93
SHKBP1-206ENST00000595523 TNFRSF1AP19438 455 aa9.26□□□□□ -0.93
SHKBP1-206ENST00000595523 HSD11B1P28845 292 aa9.26□□□□□ -0.93
SHKBP1-206ENST00000595523 ZNF121P58317 390 aaPredicted RBP9.26□□□□□ -0.93
SHKBP1-206ENST00000595523 MAB21L1Q13394 359 aa9.26□□□□□ -0.93
SHKBP1-206ENST00000595523 NXNL2Q5VZ03 156 aa9.26□□□□□ -0.93
SHKBP1-206ENST00000595523 LRRN1Q6UXK5 716 aa9.26□□□□□ -0.93
SHKBP1-206ENST00000595523 IL17RELQ6ZVW7 336 aa9.26□□□□□ -0.93
SHKBP1-206ENST00000595523 FAM57BQ71RH2 274 aa9.26□□□□□ -0.93
SHKBP1-206ENST00000595523 MEPCEQ7L2J0 689 aaKnown RBP9.26□□□□□ -0.93
SHKBP1-206ENST00000595523 OR56B2PQ8NGI1 322 aa9.26□□□□□ -0.93
SHKBP1-206ENST00000595523 ZNF420Q8TAQ5 688 aaPredicted RBP9.26□□□□□ -0.93
SHKBP1-206ENST00000595523 THEM6Q8WUY1 208 aa9.26□□□□□ -0.93
SHKBP1-206ENST00000595523 DVL3Q92997 716 aaPredicted RBP9.26□□□□□ -0.93
SHKBP1-206ENST00000595523 SGK3Q96BR1 496 aa9.26□□□□□ -0.93
SHKBP1-206ENST00000595523 RBM4BQ9BQ04 359 aaKnown RBP9.26□□□□□ -0.93
SHKBP1-206ENST00000595523 YIPF3Q9GZM5 350 aa9.26□□□□□ -0.93
SHKBP1-206ENST00000595523 RIBC2Q9H4K1 309 aa9.26□□□□□ -0.93
SHKBP1-206ENST00000595523 ZNF665Q9H7R5 613 aa9.26□□□□□ -0.93
SHKBP1-206ENST00000595523 TMEM100Q9NV29 134 aa9.26□□□□□ -0.93
SHKBP1-206ENST00000595523 KCNS2Q9ULS6 477 aa9.26□□□□□ -0.93
SHKBP1-206ENST00000595523 PPP1R3CQ9UQK1 317 aa9.26□□□□□ -0.93
SHKBP1-206ENST00000595523 LRP12Q9Y561 859 aa9.26□□□□□ -0.93
SHKBP1-206ENST00000595523 N6AMT1Q9Y5N5 214 aa9.26□□□□□ -0.93
SHKBP1-206ENST00000595523 NPTNQ9Y639 398 aa9.26□□□□□ -0.93
SHKBP1-206ENST00000595523 STAB1Q9NY15 2570 aa9.25□□□□□ -0.93
SHKBP1-206ENST00000595523 hCG_38984A0A1B0GV85 526 aa9.25□□□□□ -0.93
SHKBP1-206ENST00000595523 KIAA1324LA8MWY0 1029 aaPredicted RBP9.25□□□□□ -0.93
SHKBP1-206ENST00000595523 B4DSR2 109 aa9.25□□□□□ -0.93
SHKBP1-206ENST00000595523 TMEM178BH3BS89 294 aa9.25□□□□□ -0.93
SHKBP1-206ENST00000595523 TBX1O43435 398 aa9.25□□□□□ -0.93
SHKBP1-206ENST00000595523 XRCC2O43543 280 aa9.25□□□□□ -0.93
SHKBP1-206ENST00000595523 CA6P23280 308 aa9.25□□□□□ -0.93
SHKBP1-206ENST00000595523 PMELP40967 661 aa9.25□□□□□ -0.93
SHKBP1-206ENST00000595523 GATA4P43694 442 aa9.25□□□□□ -0.93
SHKBP1-206ENST00000595523 RAD23AP54725 363 aa9.25□□□□□ -0.93
SHKBP1-206ENST00000595523 PSMA6P60900 246 aaKnown RBP9.25□□□□□ -0.93
SHKBP1-206ENST00000595523 FAM3AP98173 230 aa9.25□□□□□ -0.93
SHKBP1-206ENST00000595523 SLC3A1Q07837 685 aa9.25□□□□□ -0.93
SHKBP1-206ENST00000595523 ZMYND11Q15326 602 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms