RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 ADAT3Q96EY9 351 aaPredicted RBP11.78□□□□□ -0.52
VRK3-209ENST00000594948 PBOV1Q9GZY1 135 aa11.78□□□□□ -0.52
VRK3-209ENST00000594948 LPAR5Q9H1C0 372 aa11.78□□□□□ -0.52
VRK3-209ENST00000594948 CERS4Q9HA82 394 aa11.78□□□□□ -0.52
VRK3-209ENST00000594948 ZFP57Q9NU63 452 aa11.78□□□□□ -0.52
VRK3-209ENST00000594948 SRPK3Q9UPE1 567 aa11.78□□□□□ -0.52
VRK3-209ENST00000594948 FLVCR1Q9Y5Y0 555 aa11.78□□□□□ -0.52
VRK3-209ENST00000594948 IGHV5-51A0A0C4DH38 117 aa11.77□□□□□ -0.52
VRK3-209ENST00000594948 ANKUB1A6NFN9 424 aa11.77□□□□□ -0.52
VRK3-209ENST00000594948 ADAM10O14672 748 aa11.77□□□□□ -0.52
VRK3-209ENST00000594948 TAAR5O14804 337 aa11.77□□□□□ -0.52
VRK3-209ENST00000594948 PET100P0DJ07 73 aa11.77□□□□□ -0.52
VRK3-209ENST00000594948 ABOP16442 354 aa11.77□□□□□ -0.52
VRK3-209ENST00000594948 GNB3P16520 340 aa11.77□□□□□ -0.52
VRK3-209ENST00000594948 FPR2P25090 351 aa11.77□□□□□ -0.52
VRK3-209ENST00000594948 GNALP38405 381 aa11.77□□□□□ -0.52
VRK3-209ENST00000594948 EMP2P54851 167 aa11.77□□□□□ -0.52
VRK3-209ENST00000594948 B2MP61769 119 aa11.77□□□□□ -0.52
VRK3-209ENST00000594948 SGCAQ16586 387 aa11.77□□□□□ -0.52
VRK3-209ENST00000594948 PLEKHN1Q494U1 663 aaPredicted RBP11.77□□□□□ -0.52
VRK3-209ENST00000594948 SLC22A6Q4U2R8 563 aa11.77□□□□□ -0.52
VRK3-209ENST00000594948 C9orf50Q5SZB4 431 aa11.77□□□□□ -0.52
VRK3-209ENST00000594948 EIF5AL1Q6IS14 154 aaKnown RBP11.77□□□□□ -0.52
VRK3-209ENST00000594948 H3F3CQ6NXT2 135 aa11.77□□□□□ -0.52
VRK3-209ENST00000594948 TMEM71Q6P5X7 295 aa11.77□□□□□ -0.52
VRK3-209ENST00000594948 FBXO46Q6PJ61 603 aaPredicted RBP11.77□□□□□ -0.52
VRK3-209ENST00000594948 OR10H5Q8NGA6 315 aa11.77□□□□□ -0.52
VRK3-209ENST00000594948 OR4A4PQ8NGN8 299 aa11.77□□□□□ -0.52
VRK3-209ENST00000594948 DNAJA3Q96EY1 480 aa11.77□□□□□ -0.52
VRK3-209ENST00000594948 SMIM8Q96KF7 97 aa11.77□□□□□ -0.52
VRK3-209ENST00000594948 OCSTAMPQ9BR26 566 aa11.77□□□□□ -0.52
VRK3-209ENST00000594948 SELENOIQ9C0D9 397 aa11.77□□□□□ -0.52
VRK3-209ENST00000594948 OR11A1Q9GZK7 315 aa11.77□□□□□ -0.52
VRK3-209ENST00000594948 NRSN2Q9GZP1 204 aa11.77□□□□□ -0.52
VRK3-209ENST00000594948 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.77□□□□□ -0.52
VRK3-209ENST00000594948 UQCC1Q9NVA1 299 aa11.77□□□□□ -0.52
VRK3-209ENST00000594948 LPAR3Q9UBY5 353 aa11.77□□□□□ -0.52
VRK3-209ENST00000594948 PIAS3Q9Y6X2 628 aa11.77□□□□□ -0.52
VRK3-209ENST00000594948 LOC100509620A0A075B734 347 aa11.76□□□□□ -0.53
VRK3-209ENST00000594948 LOC101059948A0A1B0GTJ6 334 aa11.76□□□□□ -0.53
VRK3-209ENST00000594948 C13orf42A0A1B0GVH6 325 aa11.76□□□□□ -0.53
VRK3-209ENST00000594948 H0YIZ8 118 aa11.76□□□□□ -0.53
VRK3-209ENST00000594948 PMP2P02689 132 aa11.76□□□□□ -0.53
VRK3-209ENST00000594948 IFNA4P05014 189 aa11.76□□□□□ -0.53
VRK3-209ENST00000594948 HLA-DOBP13765 273 aa11.76□□□□□ -0.53
VRK3-209ENST00000594948 HIST1H1DP16402 221 aaKnown RBP11.76□□□□□ -0.53
VRK3-209ENST00000594948 ZNF93P35789 620 aaPredicted RBP11.76□□□□□ -0.53
VRK3-209ENST00000594948 APOBEC1P41238 236 aaKnown RBP11.76□□□□□ -0.53
VRK3-209ENST00000594948 FOXK1P85037 733 aa11.76□□□□□ -0.53
VRK3-209ENST00000594948 FMODQ06828 376 aa11.76□□□□□ -0.53
VRK3-209ENST00000594948 ZNF528Q3MIS6 628 aa11.76□□□□□ -0.53
VRK3-209ENST00000594948 C17orf82Q86X59 251 aaPredicted RBP11.76□□□□□ -0.53
VRK3-209ENST00000594948 CARFQ8N187 725 aa11.76□□□□□ -0.53
VRK3-209ENST00000594948 KDM8Q8N371 416 aa11.76□□□□□ -0.53
VRK3-209ENST00000594948 KCNG3Q8TAE7 436 aa11.76□□□□□ -0.53
VRK3-209ENST00000594948 ADAMTS17Q8TE56 1095 aa11.76□□□□□ -0.53
VRK3-209ENST00000594948 RHBDD1Q8TEB9 315 aa11.76□□□□□ -0.53
VRK3-209ENST00000594948 TMEM230Q96A57 120 aa11.76□□□□□ -0.53
VRK3-209ENST00000594948 RRNAD1Q96FB5 475 aaKnown RBP11.76□□□□□ -0.53
VRK3-209ENST00000594948 CHST11Q9NPF2 352 aa11.76□□□□□ -0.53
VRK3-209ENST00000594948 CENPMQ9NSP4 180 aa11.76□□□□□ -0.53
VRK3-209ENST00000594948 WIF1Q9Y5W5 379 aa11.76□□□□□ -0.53
VRK3-209ENST00000594948 POMT1Q9Y6A1 747 aa11.76□□□□□ -0.53
VRK3-209ENST00000594948 ALPK2Q86TB3 2170 aa11.76□□□□□ -0.53
VRK3-209ENST00000594948 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.76□□□□□ -0.53
VRK3-209ENST00000594948 A0A1W2PNV4 684 aa11.76□□□□□ -0.53
VRK3-209ENST00000594948 CDC14CA4D256 554 aa11.76□□□□□ -0.53
VRK3-209ENST00000594948 C17orf51A8MQB3 221 aa11.76□□□□□ -0.53
VRK3-209ENST00000594948 PAX6P26367 422 aa11.76□□□□□ -0.53
VRK3-209ENST00000594948 CSNK1EP49674 416 aaKnown RBP11.76□□□□□ -0.53
VRK3-209ENST00000594948 HSF1Q00613 529 aa11.76□□□□□ -0.53
VRK3-209ENST00000594948 SQSTM1Q13501 440 aa11.76□□□□□ -0.53
VRK3-209ENST00000594948 OR7A5Q15622 319 aa11.76□□□□□ -0.53
VRK3-209ENST00000594948 FAM109BQ6ICB4 259 aaPredicted RBP11.76□□□□□ -0.53
VRK3-209ENST00000594948 TTLL10Q6ZVT0 673 aa11.76□□□□□ -0.53
VRK3-209ENST00000594948 Q7L0L9 218 aa11.76□□□□□ -0.53
VRK3-209ENST00000594948 LHFPL1Q86WI0 220 aa11.76□□□□□ -0.53
VRK3-209ENST00000594948 GKN2Q86XP6 184 aa11.76□□□□□ -0.53
VRK3-209ENST00000594948 ANGPTL5Q86XS5 388 aa11.76□□□□□ -0.53
VRK3-209ENST00000594948 BOLLQ8N9W6 283 aaKnown RBP11.76□□□□□ -0.53
VRK3-209ENST00000594948 TMED6Q8WW62 240 aa11.76□□□□□ -0.53
VRK3-209ENST00000594948 C11orf40Q8WZ69 217 aa11.76□□□□□ -0.53
VRK3-209ENST00000594948 C2orf50Q96LR7 162 aa11.76□□□□□ -0.53
VRK3-209ENST00000594948 TGM7Q96PF1 710 aa11.76□□□□□ -0.53
VRK3-209ENST00000594948 TLNRD1Q9H1K6 362 aa11.76□□□□□ -0.53
VRK3-209ENST00000594948 C5orf66Q9H5L9 145 aa11.76□□□□□ -0.53
VRK3-209ENST00000594948 F5P12259 2224 aa11.75□□□□□ -0.53
VRK3-209ENST00000594948 CHD7Q9P2D1 2997 aa11.75□□□□□ -0.53
VRK3-209ENST00000594948 A0A1W2PPC4 97 aa11.75□□□□□ -0.53
VRK3-209ENST00000594948 ZNF217O75362 1048 aa11.75□□□□□ -0.53
VRK3-209ENST00000594948 CSTBP04080 98 aaKnown RBP11.75□□□□□ -0.53
VRK3-209ENST00000594948 GLULP15104 373 aa11.75□□□□□ -0.53
VRK3-209ENST00000594948 ZNF20P17024 532 aa11.75□□□□□ -0.53
VRK3-209ENST00000594948 IL11P20809 199 aa11.75□□□□□ -0.53
VRK3-209ENST00000594948 OR1D4P47884 311 aa11.75□□□□□ -0.53
VRK3-209ENST00000594948 GFERP55789 205 aa11.75□□□□□ -0.53
VRK3-209ENST00000594948 HYAL1Q12794 435 aa11.75□□□□□ -0.53
VRK3-209ENST00000594948 IL15RAQ13261 267 aa11.75□□□□□ -0.53
VRK3-209ENST00000594948 AVPI1Q5T686 147 aa11.75□□□□□ -0.53
VRK3-209ENST00000594948 TMEM88Q6PEY1 159 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms