RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 TPRG1LQ5T0D9 272 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 DDI2Q5TDH0 399 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 C1orf189Q5VU69 101 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 PLPP4Q5VZY2 271 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 RESP18Q5W5W9 173 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 LEG1Q6P5S2 330 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 CERS6Q6ZMG9 384 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 CCDC121Q6ZUS5 278 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 COX15Q7KZN9 410 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 OR2W3Q7Z3T1 314 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 NT5DC3Q86UY8 548 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 CARM1Q86X55 608 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 UBALD2Q8IYN6 164 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 HS3ST5Q8IZT8 346 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 PGAM4Q8N0Y7 254 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 SLC39A11Q8N1S5 342 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 ACBD4Q8NC06 268 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 OR4F6Q8NGB9 312 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 OR52I1Q8NGK6 324 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 OR6K2Q8NGY2 324 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 OR6X1Q8NH79 312 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 OR5AK3PQ8NH89 298 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 GPR148Q8TDV2 347 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 FAM151AQ8WW52 585 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 RORBQ92753 470 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 C11orf52Q96A22 123 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 TIMD4Q96H15 378 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 CNN2Q99439 309 aaKnown RBP3.87□□□□□ -1.79
SMAD4-216ENST00000593223 MICU1Q9BPX6 476 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 MAPKAP1Q9BPZ7 522 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 NIPAL2Q9H841 368 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 SLC17A5Q9NRA2 495 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 STARD5Q9NSY2 213 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 DEPPQ9NTK1 212 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 RMND1Q9NWS8 449 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 TECRQ9NZ01 308 aaKnown RBP3.87□□□□□ -1.79
SMAD4-216ENST00000593223 MAT2BQ9NZL9 334 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 KLRF1Q9NZS2 232 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 NYAP2Q9P242 653 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 ZNF319Q9P2F9 582 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 GHRLQ9UBU3 117 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 MMACHCQ9Y4U1 282 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 OR1A2Q9Y585 309 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 FANCMQ8IYD8 2048 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 NF1P21359 2839 aa3.86□□□□□ -1.79
SMAD4-216ENST00000593223 SERINC4A6NH21 518 aa3.86□□□□□ -1.79
SMAD4-216ENST00000593223 SLC22A20A6NK97 555 aa3.86□□□□□ -1.79
SMAD4-216ENST00000593223 C2orf74A8MZ97 194 aa3.86□□□□□ -1.79
SMAD4-216ENST00000593223 H3BNH8 94 aa3.86□□□□□ -1.79
SMAD4-216ENST00000593223 M0QXV9 152 aa3.86□□□□□ -1.79
SMAD4-216ENST00000593223 DCTN6O00399 190 aa3.86□□□□□ -1.79
SMAD4-216ENST00000593223 MSH4O15457 936 aa3.86□□□□□ -1.79
SMAD4-216ENST00000593223 P2RX6O15547 441 aa3.86□□□□□ -1.79
SMAD4-216ENST00000593223 PSTPIP1O43586 416 aa3.86□□□□□ -1.79
SMAD4-216ENST00000593223 GJB5O95377 273 aa3.86□□□□□ -1.79
SMAD4-216ENST00000593223 PLEKHA8P1O95397 391 aa3.86□□□□□ -1.79
SMAD4-216ENST00000593223 P04436 131 aa3.86□□□□□ -1.79
SMAD4-216ENST00000593223 CT62P0C5K7 136 aa3.86□□□□□ -1.79
SMAD4-216ENST00000593223 H2AFXP16104 143 aaPredicted RBP3.86□□□□□ -1.79
SMAD4-216ENST00000593223 ME2P23368 584 aa3.86□□□□□ -1.79
SMAD4-216ENST00000593223 LMO2P25791 158 aa3.86□□□□□ -1.79
SMAD4-216ENST00000593223 OR1E1P30953 314 aa3.86□□□□□ -1.79
SMAD4-216ENST00000593223 TGFBR2P37173 567 aa3.86□□□□□ -1.79
SMAD4-216ENST00000593223 MAGEA5P43359 124 aa3.86□□□□□ -1.79
SMAD4-216ENST00000593223 ZFP36L2P47974 494 aaKnown RBP3.86□□□□□ -1.79
SMAD4-216ENST00000593223 KPNA2P52292 529 aaKnown RBP3.86□□□□□ -1.79
SMAD4-216ENST00000593223 ZNF33BQ06732 778 aa3.86□□□□□ -1.79
SMAD4-216ENST00000593223 PON3Q15166 354 aa3.86□□□□□ -1.79
SMAD4-216ENST00000593223 SIX1Q15475 284 aaPredicted RBP3.86□□□□□ -1.79
SMAD4-216ENST00000593223 BSXQ3C1V8 233 aa3.86□□□□□ -1.79
SMAD4-216ENST00000593223 TEX30Q5JUR7 227 aa3.86□□□□□ -1.79
SMAD4-216ENST00000593223 LY6G6FQ5SQ64 297 aa3.86□□□□□ -1.79
SMAD4-216ENST00000593223 MUC21Q5SSG8 566 aa3.86□□□□□ -1.79
SMAD4-216ENST00000593223 FKBP1CQ5VVH2 108 aa3.86□□□□□ -1.79
SMAD4-216ENST00000593223 APOBEC3HQ6NTF7 200 aaKnown RBP3.86□□□□□ -1.79
SMAD4-216ENST00000593223 SPESP1Q6UW49 350 aa3.86□□□□□ -1.79
SMAD4-216ENST00000593223 LRRN1Q6UXK5 716 aa3.86□□□□□ -1.79
SMAD4-216ENST00000593223 C19orf35Q6ZS72 473 aa3.86□□□□□ -1.79
SMAD4-216ENST00000593223 NIPA1Q7RTP0 329 aa3.86□□□□□ -1.79
SMAD4-216ENST00000593223 LHFPL3Q86UP9 236 aa3.86□□□□□ -1.79
SMAD4-216ENST00000593223 RIBC1Q8N443 379 aaPredicted RBP3.86□□□□□ -1.79
SMAD4-216ENST00000593223 TMEM251Q8N6I4 163 aa3.86□□□□□ -1.79
SMAD4-216ENST00000593223 C4orf32Q8N8J7 132 aa3.86□□□□□ -1.79
SMAD4-216ENST00000593223 OR6F1Q8NGZ6 308 aa3.86□□□□□ -1.79
SMAD4-216ENST00000593223 MYDGFQ969H8 173 aa3.86□□□□□ -1.79
SMAD4-216ENST00000593223 ITCHQ96J02 903 aa3.86□□□□□ -1.79
SMAD4-216ENST00000593223 CCDC42Q96M95 316 aa3.86□□□□□ -1.79
SMAD4-216ENST00000593223 MBOAT7Q96N66 472 aa3.86□□□□□ -1.79
SMAD4-216ENST00000593223 PRAP1Q96NZ9 151 aa3.86□□□□□ -1.79
SMAD4-216ENST00000593223 TEAD3Q99594 435 aa3.86□□□□□ -1.79
SMAD4-216ENST00000593223 KLHDC3Q9BQ90 382 aa3.86□□□□□ -1.79
SMAD4-216ENST00000593223 UCK2Q9BZX2 261 aa3.86□□□□□ -1.79
SMAD4-216ENST00000593223 ZNF665Q9H7R5 613 aa3.86□□□□□ -1.79
SMAD4-216ENST00000593223 NMUR1Q9HB89 426 aa3.86□□□□□ -1.79
SMAD4-216ENST00000593223 DDX19AQ9NUU7 478 aaKnown RBP3.86□□□□□ -1.79
SMAD4-216ENST00000593223 GPR83Q9NYM4 423 aa3.86□□□□□ -1.79
SMAD4-216ENST00000593223 IL36GQ9NZH8 169 aa3.86□□□□□ -1.79
SMAD4-216ENST00000593223 BFARQ9NZS9 450 aa3.86□□□□□ -1.79
SMAD4-216ENST00000593223 CYB5R1Q9UHQ9 305 aa3.86□□□□□ -1.79
SMAD4-216ENST00000593223 PURGQ9UJV8 347 aaKnown RBP3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms