RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 STEAP1BQ6NZ63 245 aa17.35■□□□□ 0.37
CLIP3-206ENST00000593074 COMMD2Q86X83 199 aa17.35■□□□□ 0.37
CLIP3-206ENST00000593074 PAQR4Q8N4S7 273 aaPredicted RBP17.35■□□□□ 0.37
CLIP3-206ENST00000593074 ZNF283Q8N7M2 679 aa17.35■□□□□ 0.37
CLIP3-206ENST00000593074 GJC3Q8NFK1 279 aa17.35■□□□□ 0.37
CLIP3-206ENST00000593074 SOX7Q9BT81 388 aa17.35■□□□□ 0.37
CLIP3-206ENST00000593074 ZNF436Q9C0F3 470 aaPredicted RBP17.35■□□□□ 0.37
CLIP3-206ENST00000593074 DEPPQ9NTK1 212 aa17.35■□□□□ 0.37
CLIP3-206ENST00000593074 MRPS18CQ9Y3D5 142 aaKnown RBP17.35■□□□□ 0.37
CLIP3-206ENST00000593074 PYCARD-AS1I3L0S3 204 aa17.35■□□□□ 0.37
CLIP3-206ENST00000593074 RFPL3SP0C7P2 107 aa17.35■□□□□ 0.37
CLIP3-206ENST00000593074 CNR1P21554 472 aa17.35■□□□□ 0.37
CLIP3-206ENST00000593074 TAS2R19P59542 299 aa17.35■□□□□ 0.37
CLIP3-206ENST00000593074 FAM57BQ71RH2 274 aa17.35■□□□□ 0.37
CLIP3-206ENST00000593074 PGAP1Q75T13 922 aa17.35■□□□□ 0.37
CLIP3-206ENST00000593074 DOK3Q7L591 496 aa17.35■□□□□ 0.37
CLIP3-206ENST00000593074 C20orf196Q8IYI0 205 aa17.35■□□□□ 0.37
CLIP3-206ENST00000593074 GABRG1Q8N1C3 465 aa17.35■□□□□ 0.37
CLIP3-206ENST00000593074 TMEM229BQ8NBD8 167 aa17.35■□□□□ 0.37
CLIP3-206ENST00000593074 GAL3ST1Q99999 423 aa17.35■□□□□ 0.37
CLIP3-206ENST00000593074 GINS4Q9BRT9 223 aa17.35■□□□□ 0.37
CLIP3-206ENST00000593074 GPN1Q9HCN4 374 aaPredicted RBP17.35■□□□□ 0.37
CLIP3-206ENST00000593074 MYEF2Q9P2K5 600 aaKnown RBP17.35■□□□□ 0.37
CLIP3-206ENST00000593074 ZNF107Q9UII5 783 aaPredicted RBP17.35■□□□□ 0.37
CLIP3-206ENST00000593074 SCP2D1Q9UJQ7 156 aa17.35■□□□□ 0.37
CLIP3-206ENST00000593074 NCKAP5O14513 1909 aa17.35■□□□□ 0.37
CLIP3-206ENST00000593074 METTL21EPA6NDL7 271 aa17.34■□□□□ 0.37
CLIP3-206ENST00000593074 TNFRSF10AO00220 468 aa17.34■□□□□ 0.37
CLIP3-206ENST00000593074 IGLV3-1P01715 115 aa17.34■□□□□ 0.37
CLIP3-206ENST00000593074 ABOP16442 354 aa17.34■□□□□ 0.37
CLIP3-206ENST00000593074 SNRPD2P62316 118 aaKnown RBP17.34■□□□□ 0.37
CLIP3-206ENST00000593074 CSRP2Q16527 193 aa17.34■□□□□ 0.37
CLIP3-206ENST00000593074 CDH26Q8IXH8 852 aa17.34■□□□□ 0.37
CLIP3-206ENST00000593074 OR5AS1Q8N127 324 aa17.34■□□□□ 0.37
CLIP3-206ENST00000593074 SPICQ8N5J4 248 aa17.34■□□□□ 0.37
CLIP3-206ENST00000593074 OR11H4Q8NGC9 324 aa17.34■□□□□ 0.37
CLIP3-206ENST00000593074 OR51S1Q8NGJ8 323 aa17.34■□□□□ 0.37
CLIP3-206ENST00000593074 LILRB4Q8NHJ6 448 aa17.34■□□□□ 0.37
CLIP3-206ENST00000593074 AQP3Q92482 292 aa17.34■□□□□ 0.37
CLIP3-206ENST00000593074 ULBP2Q9BZM5 246 aa17.34■□□□□ 0.37
CLIP3-206ENST00000593074 LRFN1Q9P244 771 aa17.34■□□□□ 0.37
CLIP3-206ENST00000593074 MGAT4AQ9UM21 535 aa17.34■□□□□ 0.37
CLIP3-206ENST00000593074 STMND1H3BQB6 276 aa17.33■□□□□ 0.37
CLIP3-206ENST00000593074 RAB27BO00194 218 aa17.33■□□□□ 0.37
CLIP3-206ENST00000593074 CREBL2O60519 120 aaPredicted RBP17.33■□□□□ 0.37
CLIP3-206ENST00000593074 VSIG8P0DPA2 414 aa17.33■□□□□ 0.37
CLIP3-206ENST00000593074 ZNF93P35789 620 aaPredicted RBP17.33■□□□□ 0.37
CLIP3-206ENST00000593074 ABHD17BQ5VST6 288 aa17.33■□□□□ 0.37
CLIP3-206ENST00000593074 ACBD4Q8NC06 268 aa17.33■□□□□ 0.37
CLIP3-206ENST00000593074 ZNF431Q8TF32 576 aaPredicted RBP17.33■□□□□ 0.37
CLIP3-206ENST00000593074 ADGRG7Q96K78 797 aa17.33■□□□□ 0.37
CLIP3-206ENST00000593074 A6NL46 340 aa17.33■□□□□ 0.36
CLIP3-206ENST00000593074 TRAPPC6AO75865 159 aa17.33■□□□□ 0.36
CLIP3-206ENST00000593074 F10P00742 488 aa17.33■□□□□ 0.36
CLIP3-206ENST00000593074 S100A1P23297 94 aa17.33■□□□□ 0.36
CLIP3-206ENST00000593074 OTX1P32242 354 aaPredicted RBP17.33■□□□□ 0.36
CLIP3-206ENST00000593074 CD96P40200 585 aa17.33■□□□□ 0.36
CLIP3-206ENST00000593074 GALK2Q01415 458 aa17.33■□□□□ 0.36
CLIP3-206ENST00000593074 DCAF10Q5QP82 559 aa17.33■□□□□ 0.36
CLIP3-206ENST00000593074 SLC36A1Q7Z2H8 476 aa17.33■□□□□ 0.36
CLIP3-206ENST00000593074 ADAMTS17Q8TE56 1095 aa17.33■□□□□ 0.36
CLIP3-206ENST00000593074 FAM46BQ96A09 425 aa17.33■□□□□ 0.36
CLIP3-206ENST00000593074 FAM71F1Q96KD3 344 aaPredicted RBP17.33■□□□□ 0.36
CLIP3-206ENST00000593074 RBM24Q9BX46 236 aaKnown RBP17.33■□□□□ 0.36
CLIP3-206ENST00000593074 B3GNT4Q9C0J1 378 aa17.33■□□□□ 0.36
CLIP3-206ENST00000593074 ZNF69Q9UC07 566 aa17.33■□□□□ 0.36
CLIP3-206ENST00000593074 FLVCR1Q9Y5Y0 555 aa17.33■□□□□ 0.36
CLIP3-206ENST00000593074 NCOA6Q14686 2063 aaPredicted RBP17.33■□□□□ 0.36
CLIP3-206ENST00000593074 KMT2EQ8IZD2 1858 aa17.32■□□□□ 0.36
CLIP3-206ENST00000593074 WIPF3A6NGB9 483 aa17.32■□□□□ 0.36
CLIP3-206ENST00000593074 TMEM14DPA8MWL7 114 aa17.32■□□□□ 0.36
CLIP3-206ENST00000593074 SCGNO76038 276 aa17.32■□□□□ 0.36
CLIP3-206ENST00000593074 MELTFP08582 738 aa17.32■□□□□ 0.36
CLIP3-206ENST00000593074 VSIG10L2P0DP72 767 aa17.32■□□□□ 0.36
CLIP3-206ENST00000593074 ZNF84P51523 738 aa17.32■□□□□ 0.36
CLIP3-206ENST00000593074 CARD18P57730 90 aa17.32■□□□□ 0.36
CLIP3-206ENST00000593074 MRPS34P82930 218 aaKnown RBP17.32■□□□□ 0.36
CLIP3-206ENST00000593074 ZNF260Q3ZCT1 412 aa17.32■□□□□ 0.36
CLIP3-206ENST00000593074 CCDC92Q53HC0 331 aaPredicted RBP17.32■□□□□ 0.36
CLIP3-206ENST00000593074 ABLIM2Q6H8Q1 611 aa17.32■□□□□ 0.36
CLIP3-206ENST00000593074 SPINK14Q6IE38 97 aa17.32■□□□□ 0.36
CLIP3-206ENST00000593074 PIP4P1Q86T03 277 aa17.32■□□□□ 0.36
CLIP3-206ENST00000593074 DVL3Q92997 716 aaPredicted RBP17.32■□□□□ 0.36
CLIP3-206ENST00000593074 SFXN2Q96NB2 322 aa17.32■□□□□ 0.36
CLIP3-206ENST00000593074 NUDT16L1Q9BRJ7 211 aaKnown RBP17.32■□□□□ 0.36
CLIP3-206ENST00000593074 ABI3Q9P2A4 366 aa17.32■□□□□ 0.36
CLIP3-206ENST00000593074 KLK13Q9UKR3 277 aa17.32■□□□□ 0.36
CLIP3-206ENST00000593074 ELF5Q9UKW6 265 aaPredicted RBP17.32■□□□□ 0.36
CLIP3-206ENST00000593074 TTC28Q96AY4 2481 aa17.32■□□□□ 0.36
CLIP3-206ENST00000593074 A0A0U1RQV5 110 aa17.32■□□□□ 0.36
CLIP3-206ENST00000593074 TMEM235A6NFC5 223 aa17.32■□□□□ 0.36
CLIP3-206ENST00000593074 ZNF716A6NP11 495 aa17.32■□□□□ 0.36
CLIP3-206ENST00000593074 E9PLN8 166 aa17.32■□□□□ 0.36
CLIP3-206ENST00000593074 G3V3Q6 166 aa17.32■□□□□ 0.36
CLIP3-206ENST00000593074 CD74P04233 296 aa17.32■□□□□ 0.36
CLIP3-206ENST00000593074 CASRP41180 1078 aa17.32■□□□□ 0.36
CLIP3-206ENST00000593074 NUBP1P53384 320 aa17.32■□□□□ 0.36
CLIP3-206ENST00000593074 AWAT2Q6E213 333 aa17.32■□□□□ 0.36
CLIP3-206ENST00000593074 NLRC3Q7RTR2 1065 aa17.32■□□□□ 0.36
CLIP3-206ENST00000593074 GLRX5Q86SX6 157 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms