RNA–Protein interactions for RNA: ENST00000592391.5

DDX39A-217, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,080 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-217ENST00000592391 WIPI2Q9Y4P8 454 aa12.29□□□□□ -0.44
DDX39A-217ENST00000592391 C5orf63A6NC05 138 aa12.28□□□□□ -0.44
DDX39A-217ENST00000592391 CCDC182A6NF36 153 aa12.28□□□□□ -0.44
DDX39A-217ENST00000592391 SAC3D1A6NKF1 404 aa12.28□□□□□ -0.44
DDX39A-217ENST00000592391 MLNRO43193 412 aa12.28□□□□□ -0.44
DDX39A-217ENST00000592391 TGFAP01135 160 aa12.28□□□□□ -0.44
DDX39A-217ENST00000592391 H2BFMP0C1H6 154 aa12.28□□□□□ -0.44
DDX39A-217ENST00000592391 CX3CR1P49238 355 aa12.28□□□□□ -0.44
DDX39A-217ENST00000592391 EFNB1P98172 346 aa12.28□□□□□ -0.44
DDX39A-217ENST00000592391 GLYATL3Q5SZD4 288 aa12.28□□□□□ -0.44
DDX39A-217ENST00000592391 LCN1P1Q5VSP4 162 aa12.28□□□□□ -0.44
DDX39A-217ENST00000592391 SLC16A9Q7RTY1 509 aa12.28□□□□□ -0.44
DDX39A-217ENST00000592391 TCEANCQ8N8B7 351 aa12.28□□□□□ -0.44
DDX39A-217ENST00000592391 OR2AE1Q8NHA4 323 aa12.28□□□□□ -0.44
DDX39A-217ENST00000592391 THEM6Q8WUY1 208 aa12.28□□□□□ -0.44
DDX39A-217ENST00000592391 SPRYD4Q8WW59 207 aaPredicted RBP12.28□□□□□ -0.44
DDX39A-217ENST00000592391 RAB3IPQ96QF0 476 aaPredicted RBP12.28□□□□□ -0.44
DDX39A-217ENST00000592391 RBM4BQ9BQ04 359 aaKnown RBP12.28□□□□□ -0.44
DDX39A-217ENST00000592391 REPIN1Q9BWE0 567 aaKnown RBP12.28□□□□□ -0.44
DDX39A-217ENST00000592391 GABARAPL3Q9BY60 117 aa12.28□□□□□ -0.44
DDX39A-217ENST00000592391 OPA3Q9H6K4 179 aa12.28□□□□□ -0.44
DDX39A-217ENST00000592391 SP140LQ9H930 580 aa12.28□□□□□ -0.44
DDX39A-217ENST00000592391 TMEM106BQ9NUM4 274 aa12.28□□□□□ -0.44
DDX39A-217ENST00000592391 TMEM100Q9NV29 134 aa12.28□□□□□ -0.44
DDX39A-217ENST00000592391 CD300LBA8K4G0 201 aa12.27□□□□□ -0.45
DDX39A-217ENST00000592391 B4DSR2 109 aa12.27□□□□□ -0.45
DDX39A-217ENST00000592391 H0YL77 283 aa12.27□□□□□ -0.45
DDX39A-217ENST00000592391 M0R129 80 aa12.27□□□□□ -0.45
DDX39A-217ENST00000592391 XRCC2O43543 280 aa12.27□□□□□ -0.45
DDX39A-217ENST00000592391 ANXA2P07355 339 aaKnown RBP12.27□□□□□ -0.45
DDX39A-217ENST00000592391 ALOX5APP20292 161 aa12.27□□□□□ -0.45
DDX39A-217ENST00000592391 SRP9P49458 86 aaKnown RBP12.27□□□□□ -0.45
DDX39A-217ENST00000592391 LMO4P61968 165 aa12.27□□□□□ -0.45
DDX39A-217ENST00000592391 AADACL4Q5VUY2 407 aa12.27□□□□□ -0.45
DDX39A-217ENST00000592391 MEPCEQ7L2J0 689 aaKnown RBP12.27□□□□□ -0.45
DDX39A-217ENST00000592391 PRSS45Q7RTY3 260 aa12.27□□□□□ -0.45
DDX39A-217ENST00000592391 PEG10Q86TG7 708 aaKnown RBP12.27□□□□□ -0.45
DDX39A-217ENST00000592391 TMEM163Q8TC26 289 aa12.27□□□□□ -0.45
DDX39A-217ENST00000592391 SPSB4Q96A44 273 aa12.27□□□□□ -0.45
DDX39A-217ENST00000592391 MEGF10Q96KG7 1140 aa12.27□□□□□ -0.45
DDX39A-217ENST00000592391 YIPF3Q9GZM5 350 aa12.27□□□□□ -0.45
DDX39A-217ENST00000592391 DCAF16Q9NXF7 216 aa12.27□□□□□ -0.45
DDX39A-217ENST00000592391 DNAJC27Q9NZQ0 273 aa12.27□□□□□ -0.45
DDX39A-217ENST00000592391 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.27□□□□□ -0.45
DDX39A-217ENST00000592391 LAMP5Q9UJQ1 280 aa12.27□□□□□ -0.45
DDX39A-217ENST00000592391 CDC42EP3Q9UKI2 254 aa12.27□□□□□ -0.45
DDX39A-217ENST00000592391 PPP1R3CQ9UQK1 317 aa12.27□□□□□ -0.45
DDX39A-217ENST00000592391 KLHDC2Q9Y2U9 406 aa12.27□□□□□ -0.45
DDX39A-217ENST00000592391 N6AMT1Q9Y5N5 214 aa12.27□□□□□ -0.45
DDX39A-217ENST00000592391 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.27□□□□□ -0.454e-14■■■■■ 34.7
DDX39A-217ENST00000592391 GGT3PA6NGU5 568 aa12.26□□□□□ -0.45
DDX39A-217ENST00000592391 F5H5P2 479 aa12.26□□□□□ -0.45
DDX39A-217ENST00000592391 TBX1O43435 398 aa12.26□□□□□ -0.45
DDX39A-217ENST00000592391 HLA-DPB1P04440 258 aa12.26□□□□□ -0.45
DDX39A-217ENST00000592391 POLR2IP36954 125 aaKnown RBP12.26□□□□□ -0.45
DDX39A-217ENST00000592391 ZNF121P58317 390 aaPredicted RBP12.26□□□□□ -0.45
DDX39A-217ENST00000592391 CHRFAM7AQ494W8 412 aa12.26□□□□□ -0.45
DDX39A-217ENST00000592391 NXNL2Q5VZ03 156 aa12.26□□□□□ -0.45
DDX39A-217ENST00000592391 FAM57BQ71RH2 274 aa12.26□□□□□ -0.45
DDX39A-217ENST00000592391 BCDIN3DQ7Z5W3 292 aaKnown RBP12.26□□□□□ -0.45
DDX39A-217ENST00000592391 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.26□□□□□ -0.45
DDX39A-217ENST00000592391 OR52H1Q8NGJ2 320 aa12.26□□□□□ -0.45
DDX39A-217ENST00000592391 SLC22A4Q9H015 551 aa12.26□□□□□ -0.45
DDX39A-217ENST00000592391 RIBC2Q9H4K1 309 aa12.26□□□□□ -0.45
DDX39A-217ENST00000592391 ZNF665Q9H7R5 613 aa12.26□□□□□ -0.45
DDX39A-217ENST00000592391 GCM1Q9NP62 436 aa12.26□□□□□ -0.45
DDX39A-217ENST00000592391 H2AFY2Q9P0M6 372 aaPredicted RBP12.26□□□□□ -0.45
DDX39A-217ENST00000592391 LPAR3Q9UBY5 353 aa12.26□□□□□ -0.45
DDX39A-217ENST00000592391 NOP16Q9Y3C1 178 aaKnown RBP12.26□□□□□ -0.45
DDX39A-217ENST00000592391 NPTNQ9Y639 398 aa12.26□□□□□ -0.45
DDX39A-217ENST00000592391 ABCA2Q9BZC7 2435 aa12.26□□□□□ -0.45
DDX39A-217ENST00000592391 TANC2Q9HCD6 1990 aa12.25□□□□□ -0.45
DDX39A-217ENST00000592391 MALRD1Q5VYJ5 2156 aa12.25□□□□□ -0.45
DDX39A-217ENST00000592391 SLC22A31A6NKX4 558 aa12.25□□□□□ -0.45
DDX39A-217ENST00000592391 FAM157AC9JC47 383 aa12.25□□□□□ -0.45
DDX39A-217ENST00000592391 IFNL4K9M1U5 179 aa12.25□□□□□ -0.45
DDX39A-217ENST00000592391 ALPLP05186 524 aa12.25□□□□□ -0.45
DDX39A-217ENST00000592391 MRPL3P09001 348 aaKnown RBP12.25□□□□□ -0.45
DDX39A-217ENST00000592391 MMP16P51512 607 aa12.25□□□□□ -0.45
DDX39A-217ENST00000592391 HCCSP53701 268 aa12.25□□□□□ -0.45
DDX39A-217ENST00000592391 HNRNPA0Q13151 305 aaKnown RBP12.25□□□□□ -0.45
DDX39A-217ENST00000592391 TIGD6Q17RP2 521 aa12.25□□□□□ -0.45
DDX39A-217ENST00000592391 LRRN1Q6UXK5 716 aa12.25□□□□□ -0.45
DDX39A-217ENST00000592391 GID4Q8IVV7 300 aa12.25□□□□□ -0.45
DDX39A-217ENST00000592391 CELF2-AS1Q8N7Q2 184 aa12.25□□□□□ -0.45
DDX39A-217ENST00000592391 SGK3Q96BR1 496 aa12.25□□□□□ -0.45
DDX39A-217ENST00000592391 RAB39BQ96DA2 213 aa12.25□□□□□ -0.45
DDX39A-217ENST00000592391 SIGLEC11Q96RL6 698 aa12.25□□□□□ -0.45
DDX39A-217ENST00000592391 IL4I1Q96RQ9 567 aa12.25□□□□□ -0.45
DDX39A-217ENST00000592391 CNN2Q99439 309 aaKnown RBP12.25□□□□□ -0.45
DDX39A-217ENST00000592391 GAL3ST1Q99999 423 aa12.25□□□□□ -0.45
DDX39A-217ENST00000592391 SHARPINQ9H0F6 387 aa12.25□□□□□ -0.45
DDX39A-217ENST00000592391 NIPAL2Q9H841 368 aa12.25□□□□□ -0.45
DDX39A-217ENST00000592391 USE1Q9NZ43 259 aa12.25□□□□□ -0.45
DDX39A-217ENST00000592391 MRPL15Q9P015 296 aaKnown RBP12.25□□□□□ -0.45
DDX39A-217ENST00000592391 TMEM14AQ9Y6G1 99 aa12.25□□□□□ -0.45
DDX39A-217ENST00000592391 SVEP1Q4LDE5 3571 aa12.25□□□□□ -0.45
DDX39A-217ENST00000592391 JMJD1CQ15652 2540 aa12.25□□□□□ -0.45
DDX39A-217ENST00000592391 ISPDA4D126 451 aa12.24□□□□□ -0.45
DDX39A-217ENST00000592391 TMEM178BH3BS89 294 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms