RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 MAP6Q96JE9 813 aa15.74■□□□□ 0.11
CCDC43-205ENST00000592333 NUDT16L1Q9BRJ7 211 aaKnown RBP15.74■□□□□ 0.11
CCDC43-205ENST00000592333 SLITRK2Q9H156 845 aa15.74■□□□□ 0.11
CCDC43-205ENST00000592333 WDR76Q9H967 626 aa15.74■□□□□ 0.11
CCDC43-205ENST00000592333 FN3KRPQ9HA64 309 aa15.74■□□□□ 0.11
CCDC43-205ENST00000592333 MRPL22Q9NWU5 206 aaKnown RBP15.74■□□□□ 0.11
CCDC43-205ENST00000592333 MRPL15Q9P015 296 aaKnown RBP15.74■□□□□ 0.11
CCDC43-205ENST00000592333 PCDHGB1Q9Y5G3 927 aa15.74■□□□□ 0.11
CCDC43-205ENST00000592333 CDH10Q9Y6N8 788 aa15.74■□□□□ 0.11
CCDC43-205ENST00000592333 DOCK11Q5JSL3 2073 aa15.74■□□□□ 0.11
CCDC43-205ENST00000592333 CD300LBA8K4G0 201 aa15.73■□□□□ 0.11
CCDC43-205ENST00000592333 BHLHE40O14503 412 aa15.73■□□□□ 0.11
CCDC43-205ENST00000592333 ARPC2O15144 300 aa15.73■□□□□ 0.11
CCDC43-205ENST00000592333 IGHV4-38-2P0DP08 117 aa15.73■□□□□ 0.11
CCDC43-205ENST00000592333 OR8G1Q15617 311 aa15.73■□□□□ 0.11
CCDC43-205ENST00000592333 PCK2Q16822 640 aa15.73■□□□□ 0.11
CCDC43-205ENST00000592333 CLEC12AQ5QGZ9 265 aa15.73■□□□□ 0.11
CCDC43-205ENST00000592333 PGBD2Q6P3X8 592 aa15.73■□□□□ 0.11
CCDC43-205ENST00000592333 ZNF841Q6ZN19 808 aa15.73■□□□□ 0.11
CCDC43-205ENST00000592333 ZDHHC21Q8IVQ6 265 aa15.73■□□□□ 0.11
CCDC43-205ENST00000592333 NOX4Q9NPH5 578 aa15.73■□□□□ 0.11
CCDC43-205ENST00000592333 RNF7Q9UBF6 113 aa15.73■□□□□ 0.11
CCDC43-205ENST00000592333 BAIAP2Q9UQB8 552 aa15.73■□□□□ 0.11
CCDC43-205ENST00000592333 A0A1B0GUS0 222 aa15.72■□□□□ 0.11
CCDC43-205ENST00000592333 ZNF205O95201 554 aa15.72■□□□□ 0.11
CCDC43-205ENST00000592333 RBMXP38159 391 aaKnown RBP15.72■□□□□ 0.11
CCDC43-205ENST00000592333 DDOSTP39656 456 aa15.72■□□□□ 0.11
CCDC43-205ENST00000592333 BLVRAP53004 296 aa15.72■□□□□ 0.11
CCDC43-205ENST00000592333 TEX30Q5JUR7 227 aa15.72■□□□□ 0.11
CCDC43-205ENST00000592333 ZNF362Q5T0B9 420 aaPredicted RBP15.72■□□□□ 0.11
CCDC43-205ENST00000592333 C16orf87Q6PH81 154 aa15.72■□□□□ 0.11
CCDC43-205ENST00000592333 C16orf89Q6UX73 402 aa15.72■□□□□ 0.11
CCDC43-205ENST00000592333 NAA40Q86UY6 237 aa15.72■□□□□ 0.11
CCDC43-205ENST00000592333 CDRT15Q96T59 188 aa15.72■□□□□ 0.11
CCDC43-205ENST00000592333 KIF17Q9P2E2 1029 aa15.72■□□□□ 0.11
CCDC43-205ENST00000592333 ERVK-18Q9QC07 812 aa15.72■□□□□ 0.11
CCDC43-205ENST00000592333 TAGLN3Q9UI15 199 aa15.72■□□□□ 0.11
CCDC43-205ENST00000592333 MMP24Q9Y5R2 645 aa15.72■□□□□ 0.11
CCDC43-205ENST00000592333 V9GYQ6 96 aa15.72■□□□□ 0.11
CCDC43-205ENST00000592333 TRAV38-1A0A0B4J264 116 aa15.71■□□□□ 0.11
CCDC43-205ENST00000592333 LGALS8O00214 317 aa15.71■□□□□ 0.11
CCDC43-205ENST00000592333 FAM20BO75063 409 aa15.71■□□□□ 0.11
CCDC43-205ENST00000592333 MNAT1P51948 309 aa15.71■□□□□ 0.11
CCDC43-205ENST00000592333 GPR157Q5UAW9 335 aa15.71■□□□□ 0.11
CCDC43-205ENST00000592333 RASSF6Q6ZTQ3 369 aa15.71■□□□□ 0.11
CCDC43-205ENST00000592333 RHOUQ7L0Q8 258 aa15.71■□□□□ 0.11
CCDC43-205ENST00000592333 CPLX4Q7Z7G2 160 aa15.71■□□□□ 0.11
CCDC43-205ENST00000592333 LNX2Q8N448 690 aa15.71■□□□□ 0.11
CCDC43-205ENST00000592333 TMEM86BQ8N661 226 aa15.71■□□□□ 0.11
CCDC43-205ENST00000592333 PROKR2Q8NFJ6 384 aa15.71■□□□□ 0.11
CCDC43-205ENST00000592333 OR10S1Q8NGN2 331 aa15.71■□□□□ 0.11
CCDC43-205ENST00000592333 LYVE1Q9Y5Y7 322 aa15.71■□□□□ 0.11
CCDC43-205ENST00000592333 PKD1L1Q8TDX9 2849 aa15.71■□□□□ 0.1
CCDC43-205ENST00000592333 TRAV40A0A0B4J280 105 aa15.7■□□□□ 0.1
CCDC43-205ENST00000592333 XRCC2O43543 280 aa15.7■□□□□ 0.1
CCDC43-205ENST00000592333 CA6P23280 308 aa15.7■□□□□ 0.1
CCDC43-205ENST00000592333 MAGEA2P43356 314 aa15.7■□□□□ 0.1
CCDC43-205ENST00000592333 RPL15P61313 204 aaKnown RBP15.7■□□□□ 0.1
CCDC43-205ENST00000592333 MPPED2Q15777 294 aa15.7■□□□□ 0.1
CCDC43-205ENST00000592333 SLC35F1Q5T1Q4 408 aa15.7■□□□□ 0.1
CCDC43-205ENST00000592333 SPSB4Q96A44 273 aa15.7■□□□□ 0.1
CCDC43-205ENST00000592333 DMRTB1Q96MA1 342 aa15.7■□□□□ 0.1
CCDC43-205ENST00000592333 DUX5Q96PT3 197 aa15.7■□□□□ 0.1
CCDC43-205ENST00000592333 KCNJ15Q99712 375 aa15.7■□□□□ 0.1
CCDC43-205ENST00000592333 ADAT1Q9BUB4 502 aaKnown RBP15.7■□□□□ 0.1
CCDC43-205ENST00000592333 FN3KQ9H479 309 aa15.7■□□□□ 0.1
CCDC43-205ENST00000592333 SP140LQ9H930 580 aa15.7■□□□□ 0.1
CCDC43-205ENST00000592333 C14orf119Q9NWQ9 140 aa15.7■□□□□ 0.1
CCDC43-205ENST00000592333 ACTR3BQ9P1U1 418 aa15.7■□□□□ 0.1
CCDC43-205ENST00000592333 MEGF8Q7Z7M0 2845 aa15.7■□□□□ 0.1
CCDC43-205ENST00000592333 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.69■□□□□ 0.1
CCDC43-205ENST00000592333 GGT3PA6NGU5 568 aa15.69■□□□□ 0.1
CCDC43-205ENST00000592333 P2RY10O00398 339 aa15.69■□□□□ 0.1
CCDC43-205ENST00000592333 TNFRSF13BO14836 293 aaPredicted RBP15.69■□□□□ 0.1
CCDC43-205ENST00000592333 ECDO95905 644 aaPredicted RBP15.69■□□□□ 0.1
CCDC43-205ENST00000592333 APOC1P02654 83 aa15.69■□□□□ 0.1
CCDC43-205ENST00000592333 FMO3P31513 532 aa15.69■□□□□ 0.1
CCDC43-205ENST00000592333 SLC15A1P46059 708 aa15.69■□□□□ 0.1
CCDC43-205ENST00000592333 SLC25A1P53007 311 aa15.69■□□□□ 0.1
CCDC43-205ENST00000592333 FGF12P61328 243 aa15.69■□□□□ 0.1
CCDC43-205ENST00000592333 ZNF92Q03936 586 aa15.69■□□□□ 0.1
CCDC43-205ENST00000592333 FAM201AQ5SY85 155 aa15.69■□□□□ 0.1
CCDC43-205ENST00000592333 ZNF770Q6IQ21 691 aaPredicted RBP15.69■□□□□ 0.1
CCDC43-205ENST00000592333 LYPD2Q6UXB3 125 aa15.69■□□□□ 0.1
CCDC43-205ENST00000592333 ARHGAP24Q8N264 748 aa15.69■□□□□ 0.1
CCDC43-205ENST00000592333 PNLDC1Q8NA58 520 aaKnown RBP15.69■□□□□ 0.1
CCDC43-205ENST00000592333 FAM71F1Q96KD3 344 aaPredicted RBP15.69■□□□□ 0.1
CCDC43-205ENST00000592333 MAGIXQ9H6Y5 334 aa15.69■□□□□ 0.1
CCDC43-205ENST00000592333 EGLN3Q9H6Z9 239 aa15.69■□□□□ 0.1
CCDC43-205ENST00000592333 UNKLQ9H9P5 680 aaKnown RBP15.69■□□□□ 0.1
CCDC43-205ENST00000592333 UFSP2Q9NUQ7 469 aa15.69■□□□□ 0.1
CCDC43-205ENST00000592333 COMMD3-BMI1R4GMX3 469 aa15.69■□□□□ 0.1
CCDC43-205ENST00000592333 IGHV3-64DA0A0J9YX35 117 aa15.68■□□□□ 0.1
CCDC43-205ENST00000592333 OOEPA6NGQ2 149 aa15.68■□□□□ 0.1
CCDC43-205ENST00000592333 SRRM5B3KS81 715 aa15.68■□□□□ 0.1
CCDC43-205ENST00000592333 ZNF879B4DU55 563 aa15.68■□□□□ 0.1
CCDC43-205ENST00000592333 TNFRSF11BO00300 401 aa15.68■□□□□ 0.1
CCDC43-205ENST00000592333 DCTN3O75935 186 aa15.68■□□□□ 0.1
CCDC43-205ENST00000592333 ENTPD1P49961 510 aa15.68■□□□□ 0.1
CCDC43-205ENST00000592333 GRB2P62993 217 aaKnown RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms