RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 RBM4BQ9BQ04 359 aaKnown RBP11.81□□□□□ -0.52
CLIP3-205ENST00000592017 SHARPINQ9H0F6 387 aa11.81□□□□□ -0.52
CLIP3-205ENST00000592017 MARCH7Q9H992 704 aa11.81□□□□□ -0.52
CLIP3-205ENST00000592017 DNAJC27Q9NZQ0 273 aa11.81□□□□□ -0.52
CLIP3-205ENST00000592017 LPAR3Q9UBY5 353 aa11.81□□□□□ -0.52
CLIP3-205ENST00000592017 TMEFF2Q9UIK5 374 aaPredicted RBP11.81□□□□□ -0.52
CLIP3-205ENST00000592017 MALRD1Q5VYJ5 2156 aa11.81□□□□□ -0.52
CLIP3-205ENST00000592017 YLPM1P49750 1951 aaKnown RBP11.8□□□□□ -0.52
CLIP3-205ENST00000592017 C5orf63A6NC05 138 aa11.8□□□□□ -0.52
CLIP3-205ENST00000592017 CCDC182A6NF36 153 aa11.8□□□□□ -0.52
CLIP3-205ENST00000592017 EI24O14681 340 aa11.8□□□□□ -0.52
CLIP3-205ENST00000592017 LYNP07948 512 aa11.8□□□□□ -0.52
CLIP3-205ENST00000592017 CD55P08174 381 aa11.8□□□□□ -0.52
CLIP3-205ENST00000592017 ADH4P08319 380 aa11.8□□□□□ -0.52
CLIP3-205ENST00000592017 H2BFMP0C1H6 154 aa11.8□□□□□ -0.52
CLIP3-205ENST00000592017 SELEP16581 610 aa11.8□□□□□ -0.52
CLIP3-205ENST00000592017 OTX1P32242 354 aaPredicted RBP11.8□□□□□ -0.52
CLIP3-205ENST00000592017 POLR2IP36954 125 aaKnown RBP11.8□□□□□ -0.52
CLIP3-205ENST00000592017 TMEM33P57088 247 aa11.8□□□□□ -0.52
CLIP3-205ENST00000592017 CDK5R2Q13319 367 aa11.8□□□□□ -0.52
CLIP3-205ENST00000592017 GLYATL3Q5SZD4 288 aa11.8□□□□□ -0.52
CLIP3-205ENST00000592017 C12orf73Q69YU5 71 aa11.8□□□□□ -0.52
CLIP3-205ENST00000592017 ZNF771Q7L3S4 317 aaPredicted RBP11.8□□□□□ -0.52
CLIP3-205ENST00000592017 OR8G5Q8NG78 346 aa11.8□□□□□ -0.52
CLIP3-205ENST00000592017 OTOSQ8NHW6 89 aa11.8□□□□□ -0.52
CLIP3-205ENST00000592017 RNF133Q8WVZ7 376 aa11.8□□□□□ -0.52
CLIP3-205ENST00000592017 SPRYD4Q8WW59 207 aaPredicted RBP11.8□□□□□ -0.52
CLIP3-205ENST00000592017 ITLN1Q8WWA0 313 aa11.8□□□□□ -0.52
CLIP3-205ENST00000592017 IL4I1Q96RQ9 567 aa11.8□□□□□ -0.52
CLIP3-205ENST00000592017 OSBPL10Q9BXB5 764 aa11.8□□□□□ -0.52
CLIP3-205ENST00000592017 TOR3AQ9H497 397 aa11.8□□□□□ -0.52
CLIP3-205ENST00000592017 BRD7Q9NPI1 651 aa11.8□□□□□ -0.52
CLIP3-205ENST00000592017 KLHDC2Q9Y2U9 406 aa11.8□□□□□ -0.52
CLIP3-205ENST00000592017 ORC6Q9Y5N6 252 aa11.8□□□□□ -0.52
CLIP3-205ENST00000592017 IGHV3-64DA0A0J9YX35 117 aa11.79□□□□□ -0.52
CLIP3-205ENST00000592017 ISPDA4D126 451 aa11.79□□□□□ -0.52
CLIP3-205ENST00000592017 IQCF6A8MYZ5 107 aa11.79□□□□□ -0.52
CLIP3-205ENST00000592017 RBMXP38159 391 aaKnown RBP11.79□□□□□ -0.52
CLIP3-205ENST00000592017 CDH15P55291 814 aa11.79□□□□□ -0.52
CLIP3-205ENST00000592017 ZNF92Q03936 586 aa11.79□□□□□ -0.52
CLIP3-205ENST00000592017 CR1LQ2VPA4 569 aa11.79□□□□□ -0.52
CLIP3-205ENST00000592017 GFOD2Q3B7J2 385 aa11.79□□□□□ -0.52
CLIP3-205ENST00000592017 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.79□□□□□ -0.52
CLIP3-205ENST00000592017 C10orf67Q8IYJ2 551 aa11.79□□□□□ -0.52
CLIP3-205ENST00000592017 ZNF454Q8N9F8 522 aa11.79□□□□□ -0.52
CLIP3-205ENST00000592017 LINC01356Q8N9X3 169 aa11.79□□□□□ -0.52
CLIP3-205ENST00000592017 OR13G1Q8NGZ3 307 aa11.79□□□□□ -0.52
CLIP3-205ENST00000592017 CLDND2Q8NHS1 167 aa11.79□□□□□ -0.52
CLIP3-205ENST00000592017 SPATA3Q8NHX4 192 aa11.79□□□□□ -0.52
CLIP3-205ENST00000592017 TMEM163Q8TC26 289 aa11.79□□□□□ -0.52
CLIP3-205ENST00000592017 TIMD4Q96H15 378 aa11.79□□□□□ -0.52
CLIP3-205ENST00000592017 OR2V2Q96R30 315 aa11.79□□□□□ -0.52
CLIP3-205ENST00000592017 GABARAPL3Q9BY60 117 aa11.79□□□□□ -0.52
CLIP3-205ENST00000592017 TTTY10Q9BZA0 68 aa11.79□□□□□ -0.52
CLIP3-205ENST00000592017 S100A14Q9HCY8 104 aa11.79□□□□□ -0.52
CLIP3-205ENST00000592017 H2AFY2Q9P0M6 372 aaPredicted RBP11.79□□□□□ -0.52
CLIP3-205ENST00000592017 LAMP5Q9UJQ1 280 aa11.79□□□□□ -0.52
CLIP3-205ENST00000592017 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.78□□□□□ -0.52
CLIP3-205ENST00000592017 GGT3PA6NGU5 568 aa11.78□□□□□ -0.52
CLIP3-205ENST00000592017 RNF212BA8MTL3 300 aa11.78□□□□□ -0.52
CLIP3-205ENST00000592017 H0YL77 283 aa11.78□□□□□ -0.52
CLIP3-205ENST00000592017 PHF1O43189 567 aaPredicted RBP11.78□□□□□ -0.52
CLIP3-205ENST00000592017 SRD5A1P18405 259 aa11.78□□□□□ -0.52
CLIP3-205ENST00000592017 TNFRSF1AP19438 455 aa11.78□□□□□ -0.52
CLIP3-205ENST00000592017 OPRL1P41146 370 aa11.78□□□□□ -0.52
CLIP3-205ENST00000592017 HCCSP53701 268 aa11.78□□□□□ -0.52
CLIP3-205ENST00000592017 ZNF121P58317 390 aaPredicted RBP11.78□□□□□ -0.52
CLIP3-205ENST00000592017 TIGD6Q17RP2 521 aa11.78□□□□□ -0.52
CLIP3-205ENST00000592017 LRRN1Q6UXK5 716 aa11.78□□□□□ -0.52
CLIP3-205ENST00000592017 FAM57BQ71RH2 274 aa11.78□□□□□ -0.52
CLIP3-205ENST00000592017 SLC16A9Q7RTY1 509 aa11.78□□□□□ -0.52
CLIP3-205ENST00000592017 KRT77Q7Z794 578 aa11.78□□□□□ -0.52
CLIP3-205ENST00000592017 CNN2Q99439 309 aaKnown RBP11.78□□□□□ -0.52
CLIP3-205ENST00000592017 TEAD3Q99594 435 aa11.78□□□□□ -0.52
CLIP3-205ENST00000592017 SLC30A2Q9BRI3 323 aa11.78□□□□□ -0.52
CLIP3-205ENST00000592017 TMEM100Q9NV29 134 aa11.78□□□□□ -0.52
CLIP3-205ENST00000592017 DCAF16Q9NXF7 216 aa11.78□□□□□ -0.52
CLIP3-205ENST00000592017 WIPI2Q9Y4P8 454 aa11.78□□□□□ -0.52
CLIP3-205ENST00000592017 SLC22A31A6NKX4 558 aa11.77□□□□□ -0.53
CLIP3-205ENST00000592017 CD300LBA8K4G0 201 aa11.77□□□□□ -0.53
CLIP3-205ENST00000592017 FAM157AC9JC47 383 aa11.77□□□□□ -0.53
CLIP3-205ENST00000592017 F5H5P2 479 aa11.77□□□□□ -0.53
CLIP3-205ENST00000592017 PSMD9O00233 223 aa11.77□□□□□ -0.53
CLIP3-205ENST00000592017 MLNRO43193 412 aa11.77□□□□□ -0.53
CLIP3-205ENST00000592017 XRCC2O43543 280 aa11.77□□□□□ -0.53
CLIP3-205ENST00000592017 BAG2O95816 211 aa11.77□□□□□ -0.53
CLIP3-205ENST00000592017 APOC1P02654 83 aa11.77□□□□□ -0.53
CLIP3-205ENST00000592017 HLA-DPB1P04440 258 aa11.77□□□□□ -0.53
CLIP3-205ENST00000592017 RAD23AP54725 363 aa11.77□□□□□ -0.53
CLIP3-205ENST00000592017 LMO4P61968 165 aa11.77□□□□□ -0.53
CLIP3-205ENST00000592017 SLC3A1Q07837 685 aa11.77□□□□□ -0.53
CLIP3-205ENST00000592017 ZIK1Q3SY52 487 aaPredicted RBP11.77□□□□□ -0.53
CLIP3-205ENST00000592017 NXNL2Q5VZ03 156 aa11.77□□□□□ -0.53
CLIP3-205ENST00000592017 MEPCEQ7L2J0 689 aaKnown RBP11.77□□□□□ -0.53
CLIP3-205ENST00000592017 PEG10Q86TG7 708 aaKnown RBP11.77□□□□□ -0.53
CLIP3-205ENST00000592017 GID4Q8IVV7 300 aa11.77□□□□□ -0.53
CLIP3-205ENST00000592017 CBR4Q8N4T8 237 aa11.77□□□□□ -0.53
CLIP3-205ENST00000592017 RAB1CQ92928 201 aa11.77□□□□□ -0.53
CLIP3-205ENST00000592017 STMN2Q93045 179 aa11.77□□□□□ -0.53
CLIP3-205ENST00000592017 PGAM5Q96HS1 289 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms