RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 TBC1D23Q9NUY8 699 aa8.73□□□□□ -1.01
VPS4B-207ENST00000591519 PDP1Q9P0J1 537 aaPredicted RBP8.73□□□□□ -1.01
VPS4B-207ENST00000591519 ASH2LQ9UBL3 628 aa8.73□□□□□ -1.01
VPS4B-207ENST00000591519 ZNF69Q9UC07 566 aa8.73□□□□□ -1.01
VPS4B-207ENST00000591519 COA3Q9Y2R0 106 aaPredicted RBP8.73□□□□□ -1.01
VPS4B-207ENST00000591519 CLDN34H7C241 214 aa8.72□□□□□ -1.01
VPS4B-207ENST00000591519 RER1O15258 196 aa8.72□□□□□ -1.01
VPS4B-207ENST00000591519 GPANK1O95872 356 aa8.72□□□□□ -1.01
VPS4B-207ENST00000591519 PRKACGP22612 351 aa8.72□□□□□ -1.01
VPS4B-207ENST00000591519 NOS3P29474 1203 aa8.72□□□□□ -1.01
VPS4B-207ENST00000591519 CD80P33681 288 aa8.72□□□□□ -1.01
VPS4B-207ENST00000591519 RBMXP38159 391 aaKnown RBP8.72□□□□□ -1.01
VPS4B-207ENST00000591519 CDKN2AP42771 156 aaKnown RBP8.72□□□□□ -1.01
VPS4B-207ENST00000591519 SEC61A1P61619 476 aaKnown RBP8.72□□□□□ -1.01
VPS4B-207ENST00000591519 HNRNPA0Q13151 305 aaKnown RBP8.72□□□□□ -1.01
VPS4B-207ENST00000591519 KRTAP27-1Q3LI81 207 aa8.72□□□□□ -1.01
VPS4B-207ENST00000591519 LCE3BQ5TA77 95 aa8.72□□□□□ -1.01
VPS4B-207ENST00000591519 ZNF770Q6IQ21 691 aaPredicted RBP8.72□□□□□ -1.01
VPS4B-207ENST00000591519 LEG1Q6P5S2 330 aa8.72□□□□□ -1.01
VPS4B-207ENST00000591519 RBMS3Q6XE24 437 aaKnown RBP8.72□□□□□ -1.01
VPS4B-207ENST00000591519 C9orf139Q6ZV77 190 aa8.72□□□□□ -1.01
VPS4B-207ENST00000591519 ZNF771Q7L3S4 317 aaPredicted RBP8.72□□□□□ -1.01
VPS4B-207ENST00000591519 LINC00471Q8N535 108 aa8.72□□□□□ -1.01
VPS4B-207ENST00000591519 ATG16L2Q8NAA4 619 aa8.72□□□□□ -1.01
VPS4B-207ENST00000591519 SDR9C7Q8NEX9 313 aa8.72□□□□□ -1.01
VPS4B-207ENST00000591519 GJC3Q8NFK1 279 aa8.72□□□□□ -1.01
VPS4B-207ENST00000591519 OR52L1Q8NGH7 329 aa8.72□□□□□ -1.01
VPS4B-207ENST00000591519 OR8D4Q8NGM9 314 aa8.72□□□□□ -1.01
VPS4B-207ENST00000591519 APOBEC3DQ96AK3 386 aaPredicted RBP8.72□□□□□ -1.01
VPS4B-207ENST00000591519 DACT3Q96B18 629 aaPredicted RBP8.72□□□□□ -1.01
VPS4B-207ENST00000591519 MEGF10Q96KG7 1140 aa8.72□□□□□ -1.01
VPS4B-207ENST00000591519 TSSK2Q96PF2 358 aa8.72□□□□□ -1.01
VPS4B-207ENST00000591519 OR2V2Q96R30 315 aa8.72□□□□□ -1.01
VPS4B-207ENST00000591519 NIPSNAP1Q9BPW8 284 aa8.72□□□□□ -1.01
VPS4B-207ENST00000591519 SLC30A2Q9BRI3 323 aa8.72□□□□□ -1.01
VPS4B-207ENST00000591519 MRI1Q9BV20 369 aa8.72□□□□□ -1.01
VPS4B-207ENST00000591519 YY1AP1Q9H869 796 aa8.72□□□□□ -1.01
VPS4B-207ENST00000591519 ZMAT3Q9HA38 289 aaKnown RBP8.72□□□□□ -1.01
VPS4B-207ENST00000591519 ARMC1Q9NVT9 282 aa8.72□□□□□ -1.01
VPS4B-207ENST00000591519 LRCH1Q9Y2L9 728 aa8.72□□□□□ -1.01
VPS4B-207ENST00000591519 CDH10Q9Y6N8 788 aa8.72□□□□□ -1.01
VPS4B-207ENST00000591519 DOCK11Q5JSL3 2073 aa8.72□□□□□ -1.01
VPS4B-207ENST00000591519 MGAM2Q2M2H8 2515 aa8.71□□□□□ -1.02
VPS4B-207ENST00000591519 CEACAM18A8MTB9 384 aa8.71□□□□□ -1.02
VPS4B-207ENST00000591519 IQCF6A8MYZ5 107 aa8.71□□□□□ -1.02
VPS4B-207ENST00000591519 ARPC3O15145 178 aa8.71□□□□□ -1.02
VPS4B-207ENST00000591519 DBHP09172 617 aa8.71□□□□□ -1.02
VPS4B-207ENST00000591519 HIST1H1CP16403 213 aaKnown RBP8.71□□□□□ -1.02
VPS4B-207ENST00000591519 POU1F1P28069 291 aa8.71□□□□□ -1.02
VPS4B-207ENST00000591519 CRABP1P29762 137 aa8.71□□□□□ -1.02
VPS4B-207ENST00000591519 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.71□□□□□ -1.02
VPS4B-207ENST00000591519 COX10Q12887 443 aa8.71□□□□□ -1.02
VPS4B-207ENST00000591519 HLXQ14774 488 aaPredicted RBP8.71□□□□□ -1.02
VPS4B-207ENST00000591519 ESCO2Q56NI9 601 aa8.71□□□□□ -1.02
VPS4B-207ENST00000591519 ARMCX4Q5H9R4 360 aa8.71□□□□□ -1.02
VPS4B-207ENST00000591519 PRR31Q5SQ13 230 aa8.71□□□□□ -1.02
VPS4B-207ENST00000591519 OR2T2Q6IF00 324 aa8.71□□□□□ -1.02
VPS4B-207ENST00000591519 LRRN1Q6UXK5 716 aa8.71□□□□□ -1.02
VPS4B-207ENST00000591519 RASSF6Q6ZTQ3 369 aa8.71□□□□□ -1.02
VPS4B-207ENST00000591519 ASRGL1Q7L266 308 aa8.71□□□□□ -1.02
VPS4B-207ENST00000591519 BCL6BQ8N143 479 aaPredicted RBP8.71□□□□□ -1.02
VPS4B-207ENST00000591519 CELF2-AS1Q8N7Q2 184 aa8.71□□□□□ -1.02
VPS4B-207ENST00000591519 SIGLECL1Q8N7X8 197 aa8.71□□□□□ -1.02
VPS4B-207ENST00000591519 OR52E2Q8NGJ4 325 aa8.71□□□□□ -1.02
VPS4B-207ENST00000591519 UTP4Q969X6 686 aaKnown RBP8.71□□□□□ -1.02
VPS4B-207ENST00000591519 C1orf147Q96MC9 270 aaPredicted RBP8.71□□□□□ -1.02
VPS4B-207ENST00000591519 ZNF582Q96NG8 517 aaPredicted RBP8.71□□□□□ -1.02
VPS4B-207ENST00000591519 NMNAT3Q96T66 252 aa8.71□□□□□ -1.02
VPS4B-207ENST00000591519 FEVQ99581 238 aa8.71□□□□□ -1.02
VPS4B-207ENST00000591519 COQ7Q99807 217 aa8.71□□□□□ -1.02
VPS4B-207ENST00000591519 TSSK6Q9BXA6 273 aa8.71□□□□□ -1.02
VPS4B-207ENST00000591519 HDHD2Q9H0R4 259 aa8.71□□□□□ -1.02
VPS4B-207ENST00000591519 ZNF696Q9H7X3 374 aa8.71□□□□□ -1.02
VPS4B-207ENST00000591519 SRA1Q9HD15 236 aaKnown RBP8.71□□□□□ -1.02
VPS4B-207ENST00000591519 RPRD1BQ9NQG5 326 aaKnown RBP8.71□□□□□ -1.02
VPS4B-207ENST00000591519 DNAJB9Q9UBS3 223 aa8.71□□□□□ -1.02
VPS4B-207ENST00000591519 MIOXQ9UGB7 285 aa8.71□□□□□ -1.02
VPS4B-207ENST00000591519 B9D1Q9UPM9 204 aa8.71□□□□□ -1.02
VPS4B-207ENST00000591519 PPIAL4AQ9Y536 164 aa8.71□□□□□ -1.02
VPS4B-207ENST00000591519 LHFPL6Q9Y693 200 aa8.71□□□□□ -1.02
VPS4B-207ENST00000591519 IGLV1-36A0A0B4J1U3 117 aa8.7□□□□□ -1.02
VPS4B-207ENST00000591519 KIR2DS1A0A191URI9 304 aa8.7□□□□□ -1.02
VPS4B-207ENST00000591519 H3BN98 237 aa8.7□□□□□ -1.02
VPS4B-207ENST00000591519 DCTN6O00399 190 aa8.7□□□□□ -1.02
VPS4B-207ENST00000591519 MLNRO43193 412 aa8.7□□□□□ -1.02
VPS4B-207ENST00000591519 PLATP00750 562 aa8.7□□□□□ -1.02
VPS4B-207ENST00000591519 RENP00797 406 aa8.7□□□□□ -1.02
VPS4B-207ENST00000591519 RNASE1P07998 156 aaKnown RBP8.7□□□□□ -1.02
VPS4B-207ENST00000591519 PMELP40967 661 aa8.7□□□□□ -1.02
VPS4B-207ENST00000591519 SRP9P49458 86 aaKnown RBP8.7□□□□□ -1.02
VPS4B-207ENST00000591519 KPNB1Q14974 876 aaKnown RBP8.7□□□□□ -1.02
VPS4B-207ENST00000591519 DNM1P34Q6PK57 102 aa8.7□□□□□ -1.02
VPS4B-207ENST00000591519 AMIGO2Q86SJ2 522 aa8.7□□□□□ -1.02
VPS4B-207ENST00000591519 OR5AS1Q8N127 324 aa8.7□□□□□ -1.02
VPS4B-207ENST00000591519 OR6V1Q8N148 313 aa8.7□□□□□ -1.02
VPS4B-207ENST00000591519 IQCF1Q8N6M8 205 aa8.7□□□□□ -1.02
VPS4B-207ENST00000591519 CYB561A3Q8NBI2 242 aa8.7□□□□□ -1.02
VPS4B-207ENST00000591519 PAPD5Q8NDF8 572 aaKnown RBP8.7□□□□□ -1.02
VPS4B-207ENST00000591519 OR4Q3Q8NH05 313 aa8.7□□□□□ -1.02
VPS4B-207ENST00000591519 PYDC1Q8WXC3 89 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms