RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 PPIAP62937 165 aaKnown RBP13.26□□□□□ -0.29
SMARCA4-214ENST00000589677 AGERQ15109 404 aa13.26□□□□□ -0.29
SMARCA4-214ENST00000589677 REEP6Q96HR9 211 aa13.26□□□□□ -0.29
SMARCA4-214ENST00000589677 MS4A10Q96PG2 267 aa13.26□□□□□ -0.29
SMARCA4-214ENST00000589677 ZNF275Q9NSD4 429 aaPredicted RBP13.26□□□□□ -0.29
SMARCA4-214ENST00000589677 WSB2Q9NYS7 404 aaPredicted RBP13.26□□□□□ -0.29
SMARCA4-214ENST00000589677 LPAR3Q9UBY5 353 aa13.26□□□□□ -0.29
SMARCA4-214ENST00000589677 ARL2-SNX15V9GYD0 113 aa13.26□□□□□ -0.29
SMARCA4-214ENST00000589677 XRCC2O43543 280 aa13.25□□□□□ -0.29
SMARCA4-214ENST00000589677 ABHD16AO95870 558 aa13.25□□□□□ -0.29
SMARCA4-214ENST00000589677 RAB35Q15286 201 aa13.25□□□□□ -0.29
SMARCA4-214ENST00000589677 ACKR1Q16570 336 aa13.25□□□□□ -0.29
SMARCA4-214ENST00000589677 PCK2Q16822 640 aa13.25□□□□□ -0.29
SMARCA4-214ENST00000589677 ZNF687Q8N1G0 1237 aa13.25□□□□□ -0.29
SMARCA4-214ENST00000589677 OR52N5Q8NH56 324 aa13.25□□□□□ -0.29
SMARCA4-214ENST00000589677 OR2AE1Q8NHA4 323 aa13.25□□□□□ -0.29
SMARCA4-214ENST00000589677 CMBLQ96DG6 245 aa13.25□□□□□ -0.29
SMARCA4-214ENST00000589677 MS4A4AQ96JQ5 239 aa13.25□□□□□ -0.29
SMARCA4-214ENST00000589677 SERPINE3A8MV23 424 aa13.25□□□□□ -0.29
SMARCA4-214ENST00000589677 TRAF3IP2O43734 574 aaPredicted RBP13.25□□□□□ -0.29
SMARCA4-214ENST00000589677 VEGFBP49765 207 aa13.25□□□□□ -0.29
SMARCA4-214ENST00000589677 RPL18Q07020 188 aaKnown RBP13.25□□□□□ -0.29
SMARCA4-214ENST00000589677 TMPRSS11FQ6ZWK6 438 aa13.25□□□□□ -0.29
SMARCA4-214ENST00000589677 SLC39A11Q8N1S5 342 aa13.25□□□□□ -0.29
SMARCA4-214ENST00000589677 TCTEX1D1Q8N7M0 179 aa13.25□□□□□ -0.29
SMARCA4-214ENST00000589677 C19orf47Q8N9M1 422 aaKnown RBP13.25□□□□□ -0.29
SMARCA4-214ENST00000589677 SLCO1C1Q9NYB5 712 aa13.25□□□□□ -0.29
SMARCA4-214ENST00000589677 MTCH1Q9NZJ7 389 aa13.25□□□□□ -0.29
SMARCA4-214ENST00000589677 MCTS1Q9ULC4 181 aaKnown RBP13.25□□□□□ -0.29
SMARCA4-214ENST00000589677 EIF1BO60739 113 aaKnown RBP13.25□□□□□ -0.29
SMARCA4-214ENST00000589677 TBX19O60806 448 aa13.25□□□□□ -0.29
SMARCA4-214ENST00000589677 GABRA2P47869 451 aa13.25□□□□□ -0.29
SMARCA4-214ENST00000589677 SRYQ05066 204 aa13.25□□□□□ -0.29
SMARCA4-214ENST00000589677 ZNF362Q5T0B9 420 aaPredicted RBP13.25□□□□□ -0.29
SMARCA4-214ENST00000589677 OR4S1Q8NGB4 309 aa13.25□□□□□ -0.29
SMARCA4-214ENST00000589677 OR4N2Q8NGD1 307 aa13.25□□□□□ -0.29
SMARCA4-214ENST00000589677 TMEM37Q8WXS4 190 aa13.25□□□□□ -0.29
SMARCA4-214ENST00000589677 ADGRL4Q9HBW9 690 aa13.25□□□□□ -0.29
SMARCA4-214ENST00000589677 TRBV11-1A0A0K0K1C0 115 aa13.25□□□□□ -0.29
SMARCA4-214ENST00000589677 MPPED1O15442 326 aa13.25□□□□□ -0.29
SMARCA4-214ENST00000589677 IRS1P35568 1242 aa13.25□□□□□ -0.29
SMARCA4-214ENST00000589677 PELI1Q96FA3 418 aa13.25□□□□□ -0.29
SMARCA4-214ENST00000589677 KIR3DX1Q9H7L2 352 aa13.25□□□□□ -0.29
SMARCA4-214ENST00000589677 CTSFQ9UBX1 484 aa13.25□□□□□ -0.29
SMARCA4-214ENST00000589677 AKAP11Q9UKA4 1901 aa13.24□□□□□ -0.29
SMARCA4-214ENST00000589677 ZNF816-ZNF321PA0A0X1KG74 233 aa13.24□□□□□ -0.29
SMARCA4-214ENST00000589677 PRSS37A4D1T9 235 aa13.24□□□□□ -0.29
SMARCA4-214ENST00000589677 CTAG2O75638 210 aa13.24□□□□□ -0.29
SMARCA4-214ENST00000589677 WNT11O96014 354 aa13.24□□□□□ -0.29
SMARCA4-214ENST00000589677 IGLV3-27P01718 113 aa13.24□□□□□ -0.29
SMARCA4-214ENST00000589677 PTTG1IPP53801 180 aa13.24□□□□□ -0.29
SMARCA4-214ENST00000589677 MAT1AQ00266 395 aaKnown RBP13.24□□□□□ -0.29
SMARCA4-214ENST00000589677 PNRC1Q12796 327 aaPredicted RBP13.24□□□□□ -0.29
SMARCA4-214ENST00000589677 SLC25A30Q5SVS4 291 aa13.24□□□□□ -0.29
SMARCA4-214ENST00000589677 MARCH3Q86UD3 253 aa13.24□□□□□ -0.29
SMARCA4-214ENST00000589677 ZNF321PQ8N8H1 164 aa13.24□□□□□ -0.29
SMARCA4-214ENST00000589677 OR10P1Q8NGE3 313 aa13.24□□□□□ -0.29
SMARCA4-214ENST00000589677 HDAC8Q9BY41 377 aa13.24□□□□□ -0.29
SMARCA4-214ENST00000589677 SEMA6CQ9H3T2 930 aa13.24□□□□□ -0.29
SMARCA4-214ENST00000589677 hCG_1809904A0A1W2PP81 198 aa13.24□□□□□ -0.29
SMARCA4-214ENST00000589677 A0A1W2PR64 198 aa13.24□□□□□ -0.29
SMARCA4-214ENST00000589677 A0A1W2PRV1 198 aa13.24□□□□□ -0.29
SMARCA4-214ENST00000589677 HSPB6O14558 160 aa13.24□□□□□ -0.29
SMARCA4-214ENST00000589677 PTBP3O95758 552 aaKnown RBP13.24□□□□□ -0.29
SMARCA4-214ENST00000589677 OPN1MWP04001 364 aa13.24□□□□□ -0.29
SMARCA4-214ENST00000589677 OPN1MW2P0DN77 364 aa13.24□□□□□ -0.29
SMARCA4-214ENST00000589677 OPN1MW3P0DN78 364 aa13.24□□□□□ -0.29
SMARCA4-214ENST00000589677 SPANXN5Q5MJ07 72 aa13.24□□□□□ -0.29
SMARCA4-214ENST00000589677 OR51H1Q8NH63 302 aa13.24□□□□□ -0.29
SMARCA4-214ENST00000589677 LIPHQ8WWY8 451 aa13.24□□□□□ -0.29
SMARCA4-214ENST00000589677 PACRGQ96M98 296 aaPredicted RBP13.24□□□□□ -0.29
SMARCA4-214ENST00000589677 MPGP29372 298 aa13.24□□□□□ -0.29
SMARCA4-214ENST00000589677 S100A7P31151 101 aa13.24□□□□□ -0.29
SMARCA4-214ENST00000589677 GALR1P47211 349 aa13.24□□□□□ -0.29
SMARCA4-214ENST00000589677 FOXK1P85037 733 aa13.24□□□□□ -0.29
SMARCA4-214ENST00000589677 PET117Q6UWS5 81 aa13.24□□□□□ -0.29
SMARCA4-214ENST00000589677 SOX7Q9BT81 388 aa13.24□□□□□ -0.29
SMARCA4-214ENST00000589677 EIF1P41567 113 aaKnown RBP13.24□□□□□ -0.29
SMARCA4-214ENST00000589677 CORO2AQ92828 525 aa13.24□□□□□ -0.29
SMARCA4-214ENST00000589677 GPR87Q9BY21 358 aa13.24□□□□□ -0.29
SMARCA4-214ENST00000589677 CTDSP1Q9GZU7 261 aa13.24□□□□□ -0.29
SMARCA4-214ENST00000589677 RPH3ALQ9UNE2 315 aa13.24□□□□□ -0.29
SMARCA4-214ENST00000589677 HPXP02790 462 aa13.23□□□□□ -0.29
SMARCA4-214ENST00000589677 POU3F2P20265 443 aaPredicted RBP13.23□□□□□ -0.29
SMARCA4-214ENST00000589677 PMS2P11Q13670 270 aa13.23□□□□□ -0.29
SMARCA4-214ENST00000589677 H2BFWTQ7Z2G1 175 aa13.23□□□□□ -0.29
SMARCA4-214ENST00000589677 ETFBKMTQ8IXQ9 262 aa13.23□□□□□ -0.29
SMARCA4-214ENST00000589677 OR5B3Q8NH48 314 aa13.23□□□□□ -0.29
SMARCA4-214ENST00000589677 SHDQ96IW2 340 aa13.23□□□□□ -0.29
SMARCA4-214ENST00000589677 MAP3K3Q99759 626 aa13.23□□□□□ -0.29
SMARCA4-214ENST00000589677 YTHDF2Q9Y5A9 579 aaKnown RBP13.23□□□□□ -0.29
SMARCA4-214ENST00000589677 C7orf77A4D0Y5 90 aa13.23□□□□□ -0.29
SMARCA4-214ENST00000589677 MFNGO00587 321 aa13.23□□□□□ -0.29
SMARCA4-214ENST00000589677 PTHLHP12272 177 aa13.23□□□□□ -0.29
SMARCA4-214ENST00000589677 CD200P41217 278 aa13.23□□□□□ -0.29
SMARCA4-214ENST00000589677 APOBEC1P41238 236 aaKnown RBP13.23□□□□□ -0.29
SMARCA4-214ENST00000589677 HLA-DRB3P79483 266 aa13.23□□□□□ -0.29
SMARCA4-214ENST00000589677 CLEC12BQ2HXU8 276 aa13.23□□□□□ -0.29
SMARCA4-214ENST00000589677 FAM109BQ6ICB4 259 aaPredicted RBP13.23□□□□□ -0.29
SMARCA4-214ENST00000589677 C19orf35Q6ZS72 473 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms