RNA–Protein interactions for RNA: ENST00000588411.5

CIRBP-219, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-219ENST00000588411 CD300LBA8K4G0 201 aa18.33■□□□□ 0.52
CIRBP-219ENST00000588411 ZNF878C9JN71 531 aa18.33■□□□□ 0.52
CIRBP-219ENST00000588411 E2F6O75461 281 aa18.33■□□□□ 0.52
CIRBP-219ENST00000588411 HLA-DPB1P04440 258 aa18.33■□□□□ 0.52
CIRBP-219ENST00000588411 ZFP36P26651 326 aaKnown RBP18.33■□□□□ 0.52
CIRBP-219ENST00000588411 OTX1P32242 354 aaPredicted RBP18.33■□□□□ 0.52
CIRBP-219ENST00000588411 GATA4P43694 442 aa18.33■□□□□ 0.52
CIRBP-219ENST00000588411 GRB2P62993 217 aaKnown RBP18.33■□□□□ 0.52
CIRBP-219ENST00000588411 HNRNPA0Q13151 305 aaKnown RBP18.33■□□□□ 0.52
CIRBP-219ENST00000588411 LYPD4Q6UWN0 246 aa18.33■□□□□ 0.52
CIRBP-219ENST00000588411 USP43Q70EL4 1123 aa18.33■□□□□ 0.52
CIRBP-219ENST00000588411 ZNF511Q8NB15 262 aa18.33■□□□□ 0.52
CIRBP-219ENST00000588411 BCAS4Q8TDM0 211 aa18.33■□□□□ 0.52
CIRBP-219ENST00000588411 CANT1Q8WVQ1 401 aa18.33■□□□□ 0.52
CIRBP-219ENST00000588411 SLAMF6Q96DU3 332 aa18.33■□□□□ 0.52
CIRBP-219ENST00000588411 KCNJ15Q99712 375 aa18.33■□□□□ 0.52
CIRBP-219ENST00000588411 NIPSNAP1Q9BPW8 284 aa18.33■□□□□ 0.52
CIRBP-219ENST00000588411 SUCNR1Q9BXA5 334 aa18.33■□□□□ 0.52
CIRBP-219ENST00000588411 POLR3KQ9Y2Y1 108 aaPredicted RBP18.33■□□□□ 0.52
CIRBP-219ENST00000588411 CEACAM18A8MTB9 384 aa18.32■□□□□ 0.52
CIRBP-219ENST00000588411 A8MXK9 166 aa18.32■□□□□ 0.52
CIRBP-219ENST00000588411 F5H0A9 414 aaPredicted RBP18.32■□□□□ 0.52
CIRBP-219ENST00000588411 FSTL3O95633 263 aa18.32■□□□□ 0.52
CIRBP-219ENST00000588411 CYB5R3P00387 301 aaPredicted RBP18.32■□□□□ 0.52
CIRBP-219ENST00000588411 RPS2P15880 293 aaKnown RBP18.32■□□□□ 0.52
CIRBP-219ENST00000588411 ADRA2CP18825 462 aa18.32■□□□□ 0.52
CIRBP-219ENST00000588411 PRSS12P56730 875 aa18.32■□□□□ 0.52
CIRBP-219ENST00000588411 FLOT2Q14254 428 aa18.32■□□□□ 0.52
CIRBP-219ENST00000588411 OR8G1Q15617 311 aa18.32■□□□□ 0.52
CIRBP-219ENST00000588411 SNAI3Q3KNW1 292 aa18.32■□□□□ 0.52
CIRBP-219ENST00000588411 SPATA24Q86W54 205 aa18.32■□□□□ 0.52
CIRBP-219ENST00000588411 BPIFB2Q8N4F0 458 aa18.32■□□□□ 0.52
CIRBP-219ENST00000588411 OTULINQ96BN8 352 aa18.32■□□□□ 0.52
CIRBP-219ENST00000588411 PLEKHA8Q96JA3 519 aa18.32■□□□□ 0.52
CIRBP-219ENST00000588411 SP140LQ9H930 580 aa18.32■□□□□ 0.52
CIRBP-219ENST00000588411 PDP1Q9P0J1 537 aaPredicted RBP18.32■□□□□ 0.52
CIRBP-219ENST00000588411 MIOXQ9UGB7 285 aa18.32■□□□□ 0.52
CIRBP-219ENST00000588411 WNK2Q9Y3S1 2297 aa18.32■□□□□ 0.52
CIRBP-219ENST00000588411 IGHV3-64DA0A0J9YX35 117 aa18.31■□□□□ 0.52
CIRBP-219ENST00000588411 APOC1P02654 83 aa18.31■□□□□ 0.52
CIRBP-219ENST00000588411 CLUP10909 449 aa18.31■□□□□ 0.52
CIRBP-219ENST00000588411 FPR2P25090 351 aa18.31■□□□□ 0.52
CIRBP-219ENST00000588411 POU1F1P28069 291 aa18.31■□□□□ 0.52
CIRBP-219ENST00000588411 GSTT1P30711 240 aa18.31■□□□□ 0.52
CIRBP-219ENST00000588411 CD200P41217 278 aa18.31■□□□□ 0.52
CIRBP-219ENST00000588411 PRKXP51817 358 aa18.31■□□□□ 0.52
CIRBP-219ENST00000588411 MZT1Q08AG7 82 aa18.31■□□□□ 0.52
CIRBP-219ENST00000588411 NLRC3Q7RTR2 1065 aa18.31■□□□□ 0.52
CIRBP-219ENST00000588411 Q8TCH9 128 aa18.31■□□□□ 0.52
CIRBP-219ENST00000588411 INTS14Q96SY0 518 aa18.31■□□□□ 0.52
CIRBP-219ENST00000588411 ADAT1Q9BUB4 502 aaKnown RBP18.31■□□□□ 0.52
CIRBP-219ENST00000588411 MRI1Q9BV20 369 aa18.31■□□□□ 0.52
CIRBP-219ENST00000588411 TEX12Q9BXU0 123 aa18.31■□□□□ 0.52
CIRBP-219ENST00000588411 TOR3AQ9H497 397 aa18.31■□□□□ 0.52
CIRBP-219ENST00000588411 MRPL15Q9P015 296 aaKnown RBP18.31■□□□□ 0.52
CIRBP-219ENST00000588411 XRCC2O43543 280 aa18.3■□□□□ 0.52
CIRBP-219ENST00000588411 GMDSO60547 372 aa18.3■□□□□ 0.52
CIRBP-219ENST00000588411 VENTXO95231 258 aa18.3■□□□□ 0.52
CIRBP-219ENST00000588411 PSKH1P11801 424 aa18.3■□□□□ 0.52
CIRBP-219ENST00000588411 CA6P23280 308 aa18.3■□□□□ 0.52
CIRBP-219ENST00000588411 HSD11B1P28845 292 aa18.3■□□□□ 0.52
CIRBP-219ENST00000588411 ZNF92Q03936 586 aa18.3■□□□□ 0.52
CIRBP-219ENST00000588411 EIF2B1Q14232 305 aaKnown RBP18.3■□□□□ 0.52
CIRBP-219ENST00000588411 ARMCX4Q5H9R4 360 aa18.3■□□□□ 0.52
CIRBP-219ENST00000588411 GLYATL3Q5SZD4 288 aa18.3■□□□□ 0.52
CIRBP-219ENST00000588411 SHFQ7M4L6 423 aa18.3■□□□□ 0.52
CIRBP-219ENST00000588411 ERI1Q8IV48 349 aaKnown RBP18.3■□□□□ 0.52
CIRBP-219ENST00000588411 IQCF1Q8N6M8 205 aa18.3■□□□□ 0.52
CIRBP-219ENST00000588411 SEMA6DQ8NFY4 1073 aa18.3■□□□□ 0.52
CIRBP-219ENST00000588411 OR6N2Q8NGY6 317 aa18.3■□□□□ 0.52
CIRBP-219ENST00000588411 OR2AE1Q8NHA4 323 aa18.3■□□□□ 0.52
CIRBP-219ENST00000588411 SSBP3Q9BWW4 388 aaPredicted RBP18.3■□□□□ 0.52
CIRBP-219ENST00000588411 FN3KRPQ9HA64 309 aa18.3■□□□□ 0.52
CIRBP-219ENST00000588411 TMEM165Q9HC07 324 aa18.3■□□□□ 0.52
CIRBP-219ENST00000588411 OPN4Q9UHM6 478 aa18.3■□□□□ 0.52
CIRBP-219ENST00000588411 PPIAL4AQ9Y536 164 aa18.3■□□□□ 0.52
CIRBP-219ENST00000588411 N6AMT1Q9Y5N5 214 aa18.3■□□□□ 0.52
CIRBP-219ENST00000588411 AUP1Q9Y679 476 aa18.3■□□□□ 0.52
CIRBP-219ENST00000588411 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.29■□□□□ 0.52
CIRBP-219ENST00000588411 TRIM77I1YAP6 450 aa18.29■□□□□ 0.52
CIRBP-219ENST00000588411 HMGN1P05114 100 aa18.29■□□□□ 0.52
CIRBP-219ENST00000588411 WNT2P09544 360 aa18.29■□□□□ 0.52
CIRBP-219ENST00000588411 ZNF12P17014 697 aa18.29■□□□□ 0.52
CIRBP-219ENST00000588411 RBMXP38159 391 aaKnown RBP18.29■□□□□ 0.52
CIRBP-219ENST00000588411 HILS1P60008 231 aa18.29■□□□□ 0.52
CIRBP-219ENST00000588411 SEC61A1P61619 476 aaKnown RBP18.29■□□□□ 0.52
CIRBP-219ENST00000588411 ZNF154Q13106 437 aa18.29■□□□□ 0.52
CIRBP-219ENST00000588411 MAB21L1Q13394 359 aa18.29■□□□□ 0.52
CIRBP-219ENST00000588411 LINC01590Q5TEZ4 76 aa18.29■□□□□ 0.52
CIRBP-219ENST00000588411 SPATC1Q76KD6 591 aa18.29■□□□□ 0.52
CIRBP-219ENST00000588411 KLBQ86Z14 1044 aa18.29■□□□□ 0.52
CIRBP-219ENST00000588411 SPERTQ8NA61 448 aa18.29■□□□□ 0.52
CIRBP-219ENST00000588411 PLPP7Q8NBV4 271 aa18.29■□□□□ 0.52
CIRBP-219ENST00000588411 DEFB108BQ8NET1 73 aa18.29■□□□□ 0.52
CIRBP-219ENST00000588411 OR8B3Q8NGG8 313 aa18.29■□□□□ 0.52
CIRBP-219ENST00000588411 NEIL1Q96FI4 390 aaPredicted RBP18.29■□□□□ 0.52
CIRBP-219ENST00000588411 OR8B2Q96RD0 313 aa18.29■□□□□ 0.52
CIRBP-219ENST00000588411 MMP26Q9NRE1 261 aa18.29■□□□□ 0.52
CIRBP-219ENST00000588411 INSIG2Q9Y5U4 225 aa18.29■□□□□ 0.52
CIRBP-219ENST00000588411 FAM183AA6NL82 134 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms