RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 HLA-DPB1P04440 258 aa16.47■□□□□ 0.23
TPM4-208ENST00000588410 PRR23D2P0DMB1 279 aaPredicted RBP16.47■□□□□ 0.23
TPM4-208ENST00000588410 IRF2P14316 349 aa16.47■□□□□ 0.23
TPM4-208ENST00000588410 PRKACGP22612 351 aa16.47■□□□□ 0.23
TPM4-208ENST00000588410 GATA3P23771 443 aa16.47■□□□□ 0.23
TPM4-208ENST00000588410 HSD11B1P28845 292 aa16.47■□□□□ 0.23
TPM4-208ENST00000588410 OTX1P32242 354 aaPredicted RBP16.47■□□□□ 0.23
TPM4-208ENST00000588410 MDH2P40926 338 aaKnown RBP16.47■□□□□ 0.23
TPM4-208ENST00000588410 RASSF2P50749 326 aa16.47■□□□□ 0.23
TPM4-208ENST00000588410 GRB2P62993 217 aaKnown RBP16.47■□□□□ 0.23
TPM4-208ENST00000588410 BNIP1Q12981 228 aa16.47■□□□□ 0.23
TPM4-208ENST00000588410 ZMYND11Q15326 602 aa16.47■□□□□ 0.23
TPM4-208ENST00000588410 SNAI3Q3KNW1 292 aa16.47■□□□□ 0.23
TPM4-208ENST00000588410 LINC01590Q5TEZ4 76 aa16.47■□□□□ 0.23
TPM4-208ENST00000588410 SHFQ7M4L6 423 aa16.47■□□□□ 0.23
TPM4-208ENST00000588410 MOGAT3Q86VF5 341 aa16.47■□□□□ 0.23
TPM4-208ENST00000588410 C1orf87Q8N0U7 546 aa16.47■□□□□ 0.23
TPM4-208ENST00000588410 PAPD5Q8NDF8 572 aaKnown RBP16.47■□□□□ 0.23
TPM4-208ENST00000588410 ZNF420Q8TAQ5 688 aaPredicted RBP16.47■□□□□ 0.23
TPM4-208ENST00000588410 SIGLEC11Q96RL6 698 aa16.47■□□□□ 0.23
TPM4-208ENST00000588410 CADM1Q9BY67 442 aaKnown RBP16.47■□□□□ 0.23
TPM4-208ENST00000588410 SLC22A4Q9H015 551 aa16.47■□□□□ 0.23
TPM4-208ENST00000588410 PATZ1Q9HBE1 687 aaKnown RBP16.47■□□□□ 0.23
TPM4-208ENST00000588410 KIF17Q9P2E2 1029 aa16.47■□□□□ 0.23
TPM4-208ENST00000588410 MALRD1Q5VYJ5 2156 aa16.47■□□□□ 0.23
TPM4-208ENST00000588410 CD300LBA8K4G0 201 aa16.46■□□□□ 0.23
TPM4-208ENST00000588410 CYB5R3P00387 301 aaPredicted RBP16.46■□□□□ 0.23
TPM4-208ENST00000588410 SLC2A1P11166 492 aa16.46■□□□□ 0.23
TPM4-208ENST00000588410 RBMXP38159 391 aaKnown RBP16.46■□□□□ 0.23
TPM4-208ENST00000588410 SRSF2Q01130 221 aaKnown RBP16.46■□□□□ 0.23
TPM4-208ENST00000588410 ZNF92Q03936 586 aa16.46■□□□□ 0.23
TPM4-208ENST00000588410 OR8G1Q15617 311 aa16.46■□□□□ 0.23
TPM4-208ENST00000588410 KRTAP24-1Q3LI83 254 aa16.46■□□□□ 0.23
TPM4-208ENST00000588410 GLYATL3Q5SZD4 288 aa16.46■□□□□ 0.23
TPM4-208ENST00000588410 PLBD1Q6P4A8 553 aa16.46■□□□□ 0.23
TPM4-208ENST00000588410 DPY19L4Q7Z388 723 aa16.46■□□□□ 0.23
TPM4-208ENST00000588410 OR2AE1Q8NHA4 323 aa16.46■□□□□ 0.23
TPM4-208ENST00000588410 TOR3AQ9H497 397 aa16.46■□□□□ 0.23
TPM4-208ENST00000588410 OPA3Q9H6K4 179 aa16.46■□□□□ 0.23
TPM4-208ENST00000588410 SP140LQ9H930 580 aa16.46■□□□□ 0.23
TPM4-208ENST00000588410 FBN1P35555 2871 aaKnown RBP16.45■□□□□ 0.22
TPM4-208ENST00000588410 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.45■□□□□ 0.222e-6■■□□□ 14.1
TPM4-208ENST00000588410 TBX1O43435 398 aa16.45■□□□□ 0.22
TPM4-208ENST00000588410 ATP5HO75947 161 aa16.45■□□□□ 0.22
TPM4-208ENST00000588410 APOC1P02654 83 aa16.45■□□□□ 0.22
TPM4-208ENST00000588410 ANXA2P07355 339 aaKnown RBP16.45■□□□□ 0.22
TPM4-208ENST00000588410 CA6P23280 308 aa16.45■□□□□ 0.22
TPM4-208ENST00000588410 CX3CR1P49238 355 aa16.45■□□□□ 0.22
TPM4-208ENST00000588410 KLHL12Q53G59 568 aa16.45■□□□□ 0.22
TPM4-208ENST00000588410 CELF2-AS1Q8N7Q2 184 aa16.45■□□□□ 0.22
TPM4-208ENST00000588410 OR11L1Q8NGX0 322 aa16.45■□□□□ 0.22
TPM4-208ENST00000588410 DNAJC9Q8WXX5 260 aa16.45■□□□□ 0.22
TPM4-208ENST00000588410 ERGIC1Q969X5 290 aa16.45■□□□□ 0.22
TPM4-208ENST00000588410 ABHD6Q9BV23 337 aa16.45■□□□□ 0.22
TPM4-208ENST00000588410 REPIN1Q9BWE0 567 aaKnown RBP16.45■□□□□ 0.22
TPM4-208ENST00000588410 TMPRSS13Q9BYE2 586 aa16.45■□□□□ 0.22
TPM4-208ENST00000588410 C7orf69Q9H7B7 122 aa16.45■□□□□ 0.22
TPM4-208ENST00000588410 LOC105371242A0A075B767 164 aa16.44■□□□□ 0.22
TPM4-208ENST00000588410 A0A1B0GWJ7 208 aa16.44■□□□□ 0.22
TPM4-208ENST00000588410 XRCC2O43543 280 aa16.44■□□□□ 0.22
TPM4-208ENST00000588410 TIPRLO75663 272 aa16.44■□□□□ 0.22
TPM4-208ENST00000588410 CD200P41217 278 aa16.44■□□□□ 0.22
TPM4-208ENST00000588410 ZNF181Q2M3W8 571 aa16.44■□□□□ 0.22
TPM4-208ENST00000588410 ESCO2Q56NI9 601 aa16.44■□□□□ 0.22
TPM4-208ENST00000588410 ZMYND19Q96E35 227 aaPredicted RBP16.44■□□□□ 0.22
TPM4-208ENST00000588410 NRBF2Q96F24 287 aa16.44■□□□□ 0.22
TPM4-208ENST00000588410 ADAT1Q9BUB4 502 aaKnown RBP16.44■□□□□ 0.22
TPM4-208ENST00000588410 MARCH7Q9H992 704 aa16.44■□□□□ 0.22
TPM4-208ENST00000588410 PAPOLBQ9NRJ5 636 aaKnown RBP16.44■□□□□ 0.22
TPM4-208ENST00000588410 GMDSO60547 372 aa16.43■□□□□ 0.22
TPM4-208ENST00000588410 ZNF205O95201 554 aa16.43■□□□□ 0.22
TPM4-208ENST00000588410 H2BFMP0C1H6 154 aa16.43■□□□□ 0.22
TPM4-208ENST00000588410 ZFP36P26651 326 aaKnown RBP16.43■□□□□ 0.22
TPM4-208ENST00000588410 GATA4P43694 442 aa16.43■□□□□ 0.22
TPM4-208ENST00000588410 RPS7P62081 194 aaKnown RBP16.43■□□□□ 0.22
TPM4-208ENST00000588410 CDK5Q00535 292 aa16.43■□□□□ 0.22
TPM4-208ENST00000588410 MAB21L1Q13394 359 aa16.43■□□□□ 0.22
TPM4-208ENST00000588410 TIGD6Q17RP2 521 aa16.43■□□□□ 0.22
TPM4-208ENST00000588410 C1QL2Q7Z5L3 287 aa16.43■□□□□ 0.22
TPM4-208ENST00000588410 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.43■□□□□ 0.22
TPM4-208ENST00000588410 CPOQ8IVL8 374 aa16.43■□□□□ 0.22
TPM4-208ENST00000588410 ZNF454Q8N9F8 522 aa16.43■□□□□ 0.22
TPM4-208ENST00000588410 NANPQ8TBE9 248 aa16.43■□□□□ 0.22
TPM4-208ENST00000588410 RNF133Q8WVZ7 376 aa16.43■□□□□ 0.22
TPM4-208ENST00000588410 C19orf24Q9BVV8 132 aa16.43■□□□□ 0.22
TPM4-208ENST00000588410 UFSP2Q9NUQ7 469 aa16.43■□□□□ 0.22
TPM4-208ENST00000588410 MRPL15Q9P015 296 aaKnown RBP16.43■□□□□ 0.22
TPM4-208ENST00000588410 PPIAL4EA0A075B759 164 aa16.42■□□□□ 0.22
TPM4-208ENST00000588410 PPIAL4CA0A0B4J2A2 164 aa16.42■□□□□ 0.22
TPM4-208ENST00000588410 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.42■□□□□ 0.22
TPM4-208ENST00000588410 C5orf63A6NC05 138 aa16.42■□□□□ 0.22
TPM4-208ENST00000588410 CEACAM18A8MTB9 384 aa16.42■□□□□ 0.22
TPM4-208ENST00000588410 PPIAL4DF5H284 164 aa16.42■□□□□ 0.22
TPM4-208ENST00000588410 PRODHO43272 600 aa16.42■□□□□ 0.22
TPM4-208ENST00000588410 AVPP01185 164 aa16.42■□□□□ 0.22
TPM4-208ENST00000588410 PPIAL4FP0DN26 164 aa16.42■□□□□ 0.22
TPM4-208ENST00000588410 RPS2P15880 293 aaKnown RBP16.42■□□□□ 0.22
TPM4-208ENST00000588410 EPHA1P21709 976 aa16.42■□□□□ 0.22
TPM4-208ENST00000588410 CPT2P23786 658 aa16.42■□□□□ 0.22
TPM4-208ENST00000588410 MZT1Q08AG7 82 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms