RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 CDH15P55291 814 aa12.55□□□□□ -0.4
ATG4D-207ENST00000587256 CHRFAM7AQ494W8 412 aa12.55□□□□□ -0.4
ATG4D-207ENST00000587256 ZNF771Q7L3S4 317 aaPredicted RBP12.55□□□□□ -0.4
ATG4D-207ENST00000587256 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.55□□□□□ -0.4
ATG4D-207ENST00000587256 LINC01356Q8N9X3 169 aa12.55□□□□□ -0.4
ATG4D-207ENST00000587256 THEM6Q8WUY1 208 aa12.55□□□□□ -0.4
ATG4D-207ENST00000587256 RAB3IPQ96QF0 476 aaPredicted RBP12.55□□□□□ -0.4
ATG4D-207ENST00000587256 SHARPINQ9H0F6 387 aa12.55□□□□□ -0.4
ATG4D-207ENST00000587256 PPP1R3CQ9UQK1 317 aa12.55□□□□□ -0.4
ATG4D-207ENST00000587256 TANC2Q9HCD6 1990 aa12.54□□□□□ -0.4
ATG4D-207ENST00000587256 GGT3PA6NGU5 568 aa12.54□□□□□ -0.4
ATG4D-207ENST00000587256 ZAR1LA6NP61 321 aa12.54□□□□□ -0.4
ATG4D-207ENST00000587256 XRCC2O43543 280 aa12.54□□□□□ -0.4
ATG4D-207ENST00000587256 ANOS1P23352 680 aa12.54□□□□□ -0.4
ATG4D-207ENST00000587256 EPHA2P29317 976 aa12.54□□□□□ -0.4
ATG4D-207ENST00000587256 OPRL1P41146 370 aa12.54□□□□□ -0.4
ATG4D-207ENST00000587256 SRP9P49458 86 aaKnown RBP12.54□□□□□ -0.4
ATG4D-207ENST00000587256 RAD23AP54725 363 aa12.54□□□□□ -0.4
ATG4D-207ENST00000587256 ZNF92Q03936 586 aa12.54□□□□□ -0.4
ATG4D-207ENST00000587256 TIGD6Q17RP2 521 aa12.54□□□□□ -0.4
ATG4D-207ENST00000587256 GFOD2Q3B7J2 385 aa12.54□□□□□ -0.4
ATG4D-207ENST00000587256 SLC16A9Q7RTY1 509 aa12.54□□□□□ -0.4
ATG4D-207ENST00000587256 C10orf67Q8IYJ2 551 aa12.54□□□□□ -0.4
ATG4D-207ENST00000587256 TCEANCQ8N8B7 351 aa12.54□□□□□ -0.4
ATG4D-207ENST00000587256 RAB39BQ96DA2 213 aa12.54□□□□□ -0.4
ATG4D-207ENST00000587256 CNN2Q99439 309 aaKnown RBP12.54□□□□□ -0.4
ATG4D-207ENST00000587256 PKP2Q99959 881 aa12.54□□□□□ -0.4
ATG4D-207ENST00000587256 GAL3ST1Q99999 423 aa12.54□□□□□ -0.4
ATG4D-207ENST00000587256 RBM4BQ9BQ04 359 aaKnown RBP12.54□□□□□ -0.4
ATG4D-207ENST00000587256 SLC30A2Q9BRI3 323 aa12.54□□□□□ -0.4
ATG4D-207ENST00000587256 OPA3Q9H6K4 179 aa12.54□□□□□ -0.4
ATG4D-207ENST00000587256 ZNF665Q9H7R5 613 aa12.54□□□□□ -0.4
ATG4D-207ENST00000587256 SP140LQ9H930 580 aa12.54□□□□□ -0.4
ATG4D-207ENST00000587256 LPAR2Q9HBW0 351 aa12.54□□□□□ -0.4
ATG4D-207ENST00000587256 TMEM106BQ9NUM4 274 aa12.54□□□□□ -0.4
ATG4D-207ENST00000587256 TMEM100Q9NV29 134 aa12.54□□□□□ -0.4
ATG4D-207ENST00000587256 TMEM160Q9NX00 188 aa12.54□□□□□ -0.4
ATG4D-207ENST00000587256 TMEFF2Q9UIK5 374 aaPredicted RBP12.54□□□□□ -0.4
ATG4D-207ENST00000587256 LAMP5Q9UJQ1 280 aa12.54□□□□□ -0.4
ATG4D-207ENST00000587256 CDC42EP3Q9UKI2 254 aa12.54□□□□□ -0.4
ATG4D-207ENST00000587256 KLHDC2Q9Y2U9 406 aa12.54□□□□□ -0.4
ATG4D-207ENST00000587256 ORC6Q9Y5N6 252 aa12.54□□□□□ -0.4
ATG4D-207ENST00000587256 YLPM1P49750 1951 aaKnown RBP12.54□□□□□ -0.4
ATG4D-207ENST00000587256 IGHV3-64DA0A0J9YX35 117 aa12.53□□□□□ -0.4
ATG4D-207ENST00000587256 C5orf63A6NC05 138 aa12.53□□□□□ -0.4
ATG4D-207ENST00000587256 CCDC182A6NF36 153 aa12.53□□□□□ -0.4
ATG4D-207ENST00000587256 CD300LBA8K4G0 201 aa12.53□□□□□ -0.4
ATG4D-207ENST00000587256 B4DSR2 109 aa12.53□□□□□ -0.4
ATG4D-207ENST00000587256 F5H5P2 479 aa12.53□□□□□ -0.4
ATG4D-207ENST00000587256 H0YL77 283 aa12.53□□□□□ -0.4
ATG4D-207ENST00000587256 H3BNX3 289 aa12.53□□□□□ -0.4
ATG4D-207ENST00000587256 MLNRO43193 412 aa12.53□□□□□ -0.4
ATG4D-207ENST00000587256 HLA-DPB1P04440 258 aa12.53□□□□□ -0.4
ATG4D-207ENST00000587256 HNF1AP20823 631 aa12.53□□□□□ -0.4
ATG4D-207ENST00000587256 MMP16P51512 607 aa12.53□□□□□ -0.4
ATG4D-207ENST00000587256 ZNF121P58317 390 aaPredicted RBP12.53□□□□□ -0.4
ATG4D-207ENST00000587256 HNRNPA0Q13151 305 aaKnown RBP12.53□□□□□ -0.4
ATG4D-207ENST00000587256 C12orf73Q69YU5 71 aa12.53□□□□□ -0.4
ATG4D-207ENST00000587256 FAM57BQ71RH2 274 aa12.53□□□□□ -0.4
ATG4D-207ENST00000587256 KRT77Q7Z794 578 aa12.53□□□□□ -0.4
ATG4D-207ENST00000587256 GLCCI1Q86VQ1 547 aa12.53□□□□□ -0.4
ATG4D-207ENST00000587256 TMEM163Q8TC26 289 aa12.53□□□□□ -0.4
ATG4D-207ENST00000587256 MEGF10Q96KG7 1140 aa12.53□□□□□ -0.4
ATG4D-207ENST00000587256 IL4I1Q96RQ9 567 aa12.53□□□□□ -0.4
ATG4D-207ENST00000587256 ADAT1Q9BUB4 502 aaKnown RBP12.53□□□□□ -0.4
ATG4D-207ENST00000587256 OSBPL10Q9BXB5 764 aa12.53□□□□□ -0.4
ATG4D-207ENST00000587256 BEX2Q9BXY8 128 aa12.53□□□□□ -0.4
ATG4D-207ENST00000587256 GABARAPL3Q9BY60 117 aa12.53□□□□□ -0.4
ATG4D-207ENST00000587256 YIPF3Q9GZM5 350 aa12.53□□□□□ -0.4
ATG4D-207ENST00000587256 BRD7Q9NPI1 651 aa12.53□□□□□ -0.4
ATG4D-207ENST00000587256 DCAF16Q9NXF7 216 aa12.53□□□□□ -0.4
ATG4D-207ENST00000587256 UBAP1Q9NZ09 502 aa12.53□□□□□ -0.4
ATG4D-207ENST00000587256 H2AFY2Q9P0M6 372 aaPredicted RBP12.53□□□□□ -0.4
ATG4D-207ENST00000587256 LPAR3Q9UBY5 353 aa12.53□□□□□ -0.4
ATG4D-207ENST00000587256 NOP16Q9Y3C1 178 aaKnown RBP12.53□□□□□ -0.4
ATG4D-207ENST00000587256 NPTNQ9Y639 398 aa12.53□□□□□ -0.4
ATG4D-207ENST00000587256 MALRD1Q5VYJ5 2156 aa12.52□□□□□ -0.4
ATG4D-207ENST00000587256 SLC22A31A6NKX4 558 aa12.52□□□□□ -0.41
ATG4D-207ENST00000587256 FAM157AC9JC47 383 aa12.52□□□□□ -0.41
ATG4D-207ENST00000587256 CA6P23280 308 aa12.52□□□□□ -0.41
ATG4D-207ENST00000587256 PSMA6P60900 246 aaKnown RBP12.52□□□□□ -0.41
ATG4D-207ENST00000587256 LMO4P61968 165 aa12.52□□□□□ -0.41
ATG4D-207ENST00000587256 OR8G1Q15617 311 aa12.52□□□□□ -0.41
ATG4D-207ENST00000587256 LRRN1Q6UXK5 716 aa12.52□□□□□ -0.41
ATG4D-207ENST00000587256 RHOUQ7L0Q8 258 aa12.52□□□□□ -0.41
ATG4D-207ENST00000587256 BCDIN3DQ7Z5W3 292 aaKnown RBP12.52□□□□□ -0.41
ATG4D-207ENST00000587256 GID4Q8IVV7 300 aa12.52□□□□□ -0.41
ATG4D-207ENST00000587256 OR56B2PQ8NGI1 322 aa12.52□□□□□ -0.41
ATG4D-207ENST00000587256 OR52H1Q8NGJ2 320 aa12.52□□□□□ -0.41
ATG4D-207ENST00000587256 OR51F2Q8NH61 342 aa12.52□□□□□ -0.41
ATG4D-207ENST00000587256 C1orf159Q96HA4 380 aa12.52□□□□□ -0.41
ATG4D-207ENST00000587256 REEP6Q96HR9 211 aa12.52□□□□□ -0.41
ATG4D-207ENST00000587256 PGAM5Q96HS1 289 aa12.52□□□□□ -0.41
ATG4D-207ENST00000587256 TEAD3Q99594 435 aa12.52□□□□□ -0.41
ATG4D-207ENST00000587256 REPIN1Q9BWE0 567 aaKnown RBP12.52□□□□□ -0.41
ATG4D-207ENST00000587256 SLC22A4Q9H015 551 aa12.52□□□□□ -0.41
ATG4D-207ENST00000587256 OR10A2Q9H208 303 aa12.52□□□□□ -0.41
ATG4D-207ENST00000587256 GCM1Q9NP62 436 aa12.52□□□□□ -0.41
ATG4D-207ENST00000587256 IFNL4K9M1U5 179 aa12.51□□□□□ -0.41
ATG4D-207ENST00000587256 EI24O14681 340 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms