RNA–Protein interactions for RNA: ENST00000587163.1

NPC1-205, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-205ENST00000587163 FGFRL1Q8N441 504 aa13.47□□□□□ -0.25
NPC1-205ENST00000587163 SCCPDHQ8NBX0 429 aa13.47□□□□□ -0.25
NPC1-205ENST00000587163 SLC26A10Q8NG04 563 aa13.47□□□□□ -0.25
NPC1-205ENST00000587163 SPRYD4Q8WW59 207 aaPredicted RBP13.47□□□□□ -0.25
NPC1-205ENST00000587163 RSRC1Q96IZ7 334 aaKnown RBP13.47□□□□□ -0.25
NPC1-205ENST00000587163 HSH2DQ96JZ2 352 aa13.47□□□□□ -0.25
NPC1-205ENST00000587163 PITX2Q99697 317 aa13.47□□□□□ -0.25
NPC1-205ENST00000587163 ANKRD19PQ9H560 264 aa13.47□□□□□ -0.25
NPC1-205ENST00000587163 PNRC2Q9NPJ4 139 aaKnown RBP13.47□□□□□ -0.25
NPC1-205ENST00000587163 C5orf63A6NC05 138 aa13.46□□□□□ -0.25
NPC1-205ENST00000587163 OOEPA6NGQ2 149 aa13.46□□□□□ -0.25
NPC1-205ENST00000587163 CD300LBA8K4G0 201 aa13.46□□□□□ -0.25
NPC1-205ENST00000587163 OR10H3O60404 316 aa13.46□□□□□ -0.25
NPC1-205ENST00000587163 PTBP3O95758 552 aaKnown RBP13.46□□□□□ -0.25
NPC1-205ENST00000587163 CRABP1P29762 137 aa13.46□□□□□ -0.25
NPC1-205ENST00000587163 RPS6KA3P51812 740 aa13.46□□□□□ -0.25
NPC1-205ENST00000587163 LIPEQ05469 1076 aa13.46□□□□□ -0.25
NPC1-205ENST00000587163 MALLQ13021 153 aa13.46□□□□□ -0.25
NPC1-205ENST00000587163 SEC23BQ15437 767 aa13.46□□□□□ -0.25
NPC1-205ENST00000587163 KCNJ8Q15842 424 aa13.46□□□□□ -0.25
NPC1-205ENST00000587163 PGM2L1Q6PCE3 622 aa13.46□□□□□ -0.25
NPC1-205ENST00000587163 ZNF826PQ6ZT77 177 aa13.46□□□□□ -0.25
NPC1-205ENST00000587163 FAM90A1Q86YD7 464 aa13.46□□□□□ -0.25
NPC1-205ENST00000587163 SLC15A3Q8IY34 581 aa13.46□□□□□ -0.25
NPC1-205ENST00000587163 ERMAPQ96PL5 475 aaPredicted RBP13.46□□□□□ -0.25
NPC1-205ENST00000587163 NMNAT3Q96T66 252 aa13.46□□□□□ -0.25
NPC1-205ENST00000587163 ATF6BQ99941 703 aa13.46□□□□□ -0.25
NPC1-205ENST00000587163 SEMA6AQ9H2E6 1030 aa13.46□□□□□ -0.25
NPC1-205ENST00000587163 C16orf95Q9H693 158 aa13.46□□□□□ -0.25
NPC1-205ENST00000587163 ENPP4Q9Y6X5 453 aa13.46□□□□□ -0.25
NPC1-205ENST00000587163 TRAV38-1A0A0B4J264 116 aa13.45□□□□□ -0.26
NPC1-205ENST00000587163 A0A1W2PRQ8 180 aa13.45□□□□□ -0.26
NPC1-205ENST00000587163 UNC119BA6NIH7 251 aa13.45□□□□□ -0.26
NPC1-205ENST00000587163 DVL1O14640 695 aa13.45□□□□□ -0.26
NPC1-205ENST00000587163 SERPINA1P01009 418 aa13.45□□□□□ -0.26
NPC1-205ENST00000587163 GGT2P36268 569 aa13.45□□□□□ -0.26
NPC1-205ENST00000587163 ELF3P78545 371 aaPredicted RBP13.45□□□□□ -0.26
NPC1-205ENST00000587163 ZNF92Q03936 586 aa13.45□□□□□ -0.26
NPC1-205ENST00000587163 PRB3Q04118 309 aaPredicted RBP13.45□□□□□ -0.26
NPC1-205ENST00000587163 ECH1Q13011 328 aa13.45□□□□□ -0.26
NPC1-205ENST00000587163 DGCR6Q14129 220 aa13.45□□□□□ -0.26
NPC1-205ENST00000587163 MAPRE2Q15555 327 aa13.45□□□□□ -0.26
NPC1-205ENST00000587163 HIST2H2BDQ6DRA6 164 aa13.45□□□□□ -0.26
NPC1-205ENST00000587163 DNM1P34Q6PK57 102 aa13.45□□□□□ -0.26
NPC1-205ENST00000587163 GDPGP1Q6ZNW5 385 aa13.45□□□□□ -0.26
NPC1-205ENST00000587163 GCSAMQ8N6F7 178 aa13.45□□□□□ -0.26
NPC1-205ENST00000587163 OR2AE1Q8NHA4 323 aa13.45□□□□□ -0.26
NPC1-205ENST00000587163 RCN3Q96D15 328 aa13.45□□□□□ -0.26
NPC1-205ENST00000587163 ADAT1Q9BUB4 502 aaKnown RBP13.45□□□□□ -0.26
NPC1-205ENST00000587163 C1orf123Q9NWV4 160 aa13.45□□□□□ -0.26
NPC1-205ENST00000587163 CYB5R1Q9UHQ9 305 aa13.45□□□□□ -0.26
NPC1-205ENST00000587163 IGHV3OR15-7A0A075B7D8 119 aa13.44□□□□□ -0.26
NPC1-205ENST00000587163 TRBV4-1A0A0J9YWV2 114 aa13.44□□□□□ -0.26
NPC1-205ENST00000587163 ZNF816-ZNF321PA0A0X1KG74 233 aa13.44□□□□□ -0.26
NPC1-205ENST00000587163 A0A1B0GW55 424 aa13.44□□□□□ -0.26
NPC1-205ENST00000587163 NDUFA2O43678 99 aa13.44□□□□□ -0.26
NPC1-205ENST00000587163 GMDSO60547 372 aa13.44□□□□□ -0.26
NPC1-205ENST00000587163 H1F0P07305 194 aaKnown RBP13.44□□□□□ -0.26
NPC1-205ENST00000587163 GRPP07492 148 aa13.44□□□□□ -0.26
NPC1-205ENST00000587163 DUX4L2P0CJ85 424 aa13.44□□□□□ -0.26
NPC1-205ENST00000587163 DUX4L3P0CJ86 424 aa13.44□□□□□ -0.26
NPC1-205ENST00000587163 DUX4L4P0CJ87 422 aa13.44□□□□□ -0.26
NPC1-205ENST00000587163 DUX4L5P0CJ88 424 aa13.44□□□□□ -0.26
NPC1-205ENST00000587163 DUX4L6P0CJ89 424 aa13.44□□□□□ -0.26
NPC1-205ENST00000587163 DUX4L7P0CJ90 424 aa13.44□□□□□ -0.26
NPC1-205ENST00000587163 SNAI3Q3KNW1 292 aa13.44□□□□□ -0.26
NPC1-205ENST00000587163 FBLN7Q53RD9 439 aa13.44□□□□□ -0.26
NPC1-205ENST00000587163 FGD3Q5JSP0 725 aa13.44□□□□□ -0.26
NPC1-205ENST00000587163 DUX4L9Q6RFH8 374 aaPredicted RBP13.44□□□□□ -0.26
NPC1-205ENST00000587163 MRPL21Q7Z2W9 205 aaKnown RBP13.44□□□□□ -0.26
NPC1-205ENST00000587163 VMO1Q7Z5L0 202 aa13.44□□□□□ -0.26
NPC1-205ENST00000587163 CYP4Z1Q86W10 505 aa13.44□□□□□ -0.26
NPC1-205ENST00000587163 PLPP7Q8NBV4 271 aa13.44□□□□□ -0.26
NPC1-205ENST00000587163 OR4K13Q8NH42 304 aa13.44□□□□□ -0.26
NPC1-205ENST00000587163 MAP6Q96JE9 813 aa13.44□□□□□ -0.26
NPC1-205ENST00000587163 SLC22A4Q9H015 551 aa13.44□□□□□ -0.26
NPC1-205ENST00000587163 DPAGT1Q9H3H5 408 aa13.44□□□□□ -0.26
NPC1-205ENST00000587163 CNTD2Q9H8S5 307 aa13.44□□□□□ -0.26
NPC1-205ENST00000587163 ADA2Q9NZK5 511 aa13.44□□□□□ -0.26
NPC1-205ENST00000587163 NDUFAF4Q9P032 175 aa13.44□□□□□ -0.26
NPC1-205ENST00000587163 DUX4Q9UBX2 424 aa13.44□□□□□ -0.26
NPC1-205ENST00000587163 RPUSD1Q9UJJ7 312 aaKnown RBP13.44□□□□□ -0.26
NPC1-205ENST00000587163 ZNF281Q9Y2X9 895 aa13.44□□□□□ -0.26
NPC1-205ENST00000587163 HMGB1P1B2RPK0 211 aaPredicted RBP13.43□□□□□ -0.26
NPC1-205ENST00000587163 G3V4G9 280 aa13.43□□□□□ -0.26
NPC1-205ENST00000587163 NME4O00746 187 aa13.43□□□□□ -0.26
NPC1-205ENST00000587163 GSTA4O15217 222 aa13.43□□□□□ -0.26
NPC1-205ENST00000587163 LHBP01229 141 aa13.43□□□□□ -0.26
NPC1-205ENST00000587163 HIST1H1CP16403 213 aaKnown RBP13.43□□□□□ -0.26
NPC1-205ENST00000587163 TPTEP56180 551 aa13.43□□□□□ -0.26
NPC1-205ENST00000587163 EGR3Q06889 387 aa13.43□□□□□ -0.26
NPC1-205ENST00000587163 CDONQ4KMG0 1287 aa13.43□□□□□ -0.26
NPC1-205ENST00000587163 CGB2Q6NT52 195 aa13.43□□□□□ -0.26
NPC1-205ENST00000587163 SMARCD3Q6STE5 483 aa13.43□□□□□ -0.26
NPC1-205ENST00000587163 ZBTB46Q86UZ6 589 aa13.43□□□□□ -0.26
NPC1-205ENST00000587163 OR2AJ1Q8NGZ0 328 aa13.43□□□□□ -0.26
NPC1-205ENST00000587163 OR52J3Q8NH60 311 aa13.43□□□□□ -0.26
NPC1-205ENST00000587163 ST8SIA4Q92187 359 aa13.43□□□□□ -0.26
NPC1-205ENST00000587163 FN3KQ9H479 309 aa13.43□□□□□ -0.26
NPC1-205ENST00000587163 TRIM36Q9NQ86 728 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms