RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 KCNJ15Q99712 375 aa10.44□□□□□ -0.74
SS18-225ENST00000585121 OPA3Q9H6K4 179 aa10.44□□□□□ -0.74
SS18-225ENST00000585121 DCLRE1BQ9H816 532 aa10.44□□□□□ -0.74
SS18-225ENST00000585121 GCM1Q9NP62 436 aa10.44□□□□□ -0.74
SS18-225ENST00000585121 DCAF16Q9NXF7 216 aa10.44□□□□□ -0.74
SS18-225ENST00000585121 DNAJB9Q9UBS3 223 aa10.44□□□□□ -0.74
SS18-225ENST00000585121 GGT3PA6NGU5 568 aa10.43□□□□□ -0.74
SS18-225ENST00000585121 ZNF878C9JN71 531 aa10.43□□□□□ -0.74
SS18-225ENST00000585121 F5H5P2 479 aa10.43□□□□□ -0.74
SS18-225ENST00000585121 TMEM178BH3BS89 294 aa10.43□□□□□ -0.74
SS18-225ENST00000585121 FKBP6O75344 327 aa10.43□□□□□ -0.74
SS18-225ENST00000585121 ATP6V1G2O95670 118 aa10.43□□□□□ -0.74
SS18-225ENST00000585121 OSMP13725 252 aa10.43□□□□□ -0.74
SS18-225ENST00000585121 HSD11B1P28845 292 aa10.43□□□□□ -0.74
SS18-225ENST00000585121 GSTT1P30711 240 aa10.43□□□□□ -0.74
SS18-225ENST00000585121 MMP16P51512 607 aa10.43□□□□□ -0.74
SS18-225ENST00000585121 PRKXP51817 358 aa10.43□□□□□ -0.74
SS18-225ENST00000585121 GRB2P62993 217 aaKnown RBP10.43□□□□□ -0.74
SS18-225ENST00000585121 LCN2P80188 198 aa10.43□□□□□ -0.74
SS18-225ENST00000585121 EIF2B1Q14232 305 aaKnown RBP10.43□□□□□ -0.74
SS18-225ENST00000585121 GINS1Q14691 196 aa10.43□□□□□ -0.74
SS18-225ENST00000585121 PCK2Q16822 640 aa10.43□□□□□ -0.74
SS18-225ENST00000585121 LYPD4Q6UWN0 246 aa10.43□□□□□ -0.74
SS18-225ENST00000585121 MOGAT3Q86VF5 341 aa10.43□□□□□ -0.74
SS18-225ENST00000585121 ERI1Q8IV48 349 aaKnown RBP10.43□□□□□ -0.74
SS18-225ENST00000585121 IQCF1Q8N6M8 205 aa10.43□□□□□ -0.74
SS18-225ENST00000585121 OR10S1Q8NGN2 331 aa10.43□□□□□ -0.74
SS18-225ENST00000585121 OR11L1Q8NGX0 322 aa10.43□□□□□ -0.74
SS18-225ENST00000585121 OR6N2Q8NGY6 317 aa10.43□□□□□ -0.74
SS18-225ENST00000585121 ERGIC1Q969X5 290 aa10.43□□□□□ -0.74
SS18-225ENST00000585121 PLEKHA8Q96JA3 519 aa10.43□□□□□ -0.74
SS18-225ENST00000585121 INTS14Q96SY0 518 aa10.43□□□□□ -0.74
SS18-225ENST00000585121 TOR3AQ9H497 397 aa10.43□□□□□ -0.74
SS18-225ENST00000585121 PATZ1Q9HBE1 687 aaKnown RBP10.43□□□□□ -0.74
SS18-225ENST00000585121 G6PC2Q9NQR9 355 aa10.43□□□□□ -0.74
SS18-225ENST00000585121 KIF17Q9P2E2 1029 aa10.43□□□□□ -0.74
SS18-225ENST00000585121 N6AMT1Q9Y5N5 214 aa10.43□□□□□ -0.74
SS18-225ENST00000585121 A0A0A6YYJ9 748 aa10.43□□□□□ -0.74
SS18-225ENST00000585121 TCRBV3S1A0A5B6 114 aa10.43□□□□□ -0.74
SS18-225ENST00000585121 FAM183AA6NL82 134 aa10.43□□□□□ -0.74
SS18-225ENST00000585121 CD300LBA8K4G0 201 aa10.43□□□□□ -0.74
SS18-225ENST00000585121 PRR23D1E9PI22 279 aaPredicted RBP10.43□□□□□ -0.74
SS18-225ENST00000585121 H0YL77 283 aa10.43□□□□□ -0.74
SS18-225ENST00000585121 MLNRO43193 412 aa10.43□□□□□ -0.74
SS18-225ENST00000585121 GLCEO94923 617 aa10.43□□□□□ -0.74
SS18-225ENST00000585121 PRR23D2P0DMB1 279 aaPredicted RBP10.43□□□□□ -0.74
SS18-225ENST00000585121 CLUP10909 449 aa10.43□□□□□ -0.74
SS18-225ENST00000585121 CPT2P23786 658 aa10.43□□□□□ -0.74
SS18-225ENST00000585121 OTX1P32242 354 aaPredicted RBP10.43□□□□□ -0.74
SS18-225ENST00000585121 MZT1Q08AG7 82 aa10.43□□□□□ -0.74
SS18-225ENST00000585121 ZMYND11Q15326 602 aa10.43□□□□□ -0.74
SS18-225ENST00000585121 OR8G1Q15617 311 aa10.43□□□□□ -0.74
SS18-225ENST00000585121 ESCO2Q56NI9 601 aa10.43□□□□□ -0.74
SS18-225ENST00000585121 TMEM179BQ7Z7N9 219 aa10.43□□□□□ -0.74
SS18-225ENST00000585121 CELF2-AS1Q8N7Q2 184 aa10.43□□□□□ -0.74
SS18-225ENST00000585121 ZNF420Q8TAQ5 688 aaPredicted RBP10.43□□□□□ -0.74
SS18-225ENST00000585121 ZNF418Q8TF45 676 aaPredicted RBP10.43□□□□□ -0.74
SS18-225ENST00000585121 DNAJC9Q8WXX5 260 aa10.43□□□□□ -0.74
SS18-225ENST00000585121 STMN2Q93045 179 aa10.43□□□□□ -0.74
SS18-225ENST00000585121 OR51V1Q9H2C8 321 aa10.43□□□□□ -0.74
SS18-225ENST00000585121 C7orf69Q9H7B7 122 aa10.43□□□□□ -0.74
SS18-225ENST00000585121 MED20Q9H944 212 aa10.43□□□□□ -0.74
SS18-225ENST00000585121 PPIAL4EA0A075B759 164 aa10.42□□□□□ -0.74
SS18-225ENST00000585121 PPIAL4CA0A0B4J2A2 164 aa10.42□□□□□ -0.74
SS18-225ENST00000585121 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.42□□□□□ -0.74
SS18-225ENST00000585121 PPIAL4DF5H284 164 aa10.42□□□□□ -0.74
SS18-225ENST00000585121 TBX1O43435 398 aa10.42□□□□□ -0.74
SS18-225ENST00000585121 XRCC2O43543 280 aa10.42□□□□□ -0.74
SS18-225ENST00000585121 GMDSO60547 372 aa10.42□□□□□ -0.74
SS18-225ENST00000585121 CYB5R3P00387 301 aaPredicted RBP10.42□□□□□ -0.74
SS18-225ENST00000585121 HLA-DPB1P04440 258 aa10.42□□□□□ -0.74
SS18-225ENST00000585121 ANXA2P07355 339 aaKnown RBP10.42□□□□□ -0.74
SS18-225ENST00000585121 PPIAL4FP0DN26 164 aa10.42□□□□□ -0.74
SS18-225ENST00000585121 PRSS12P56730 875 aa10.42□□□□□ -0.74
SS18-225ENST00000585121 ZNF92Q03936 586 aa10.42□□□□□ -0.74
SS18-225ENST00000585121 ZNF181Q2M3W8 571 aa10.42□□□□□ -0.74
SS18-225ENST00000585121 SNAI3Q3KNW1 292 aa10.42□□□□□ -0.74
SS18-225ENST00000585121 KRTAP24-1Q3LI83 254 aa10.42□□□□□ -0.74
SS18-225ENST00000585121 LINC01590Q5TEZ4 76 aa10.42□□□□□ -0.74
SS18-225ENST00000585121 SPATC1Q76KD6 591 aa10.42□□□□□ -0.74
SS18-225ENST00000585121 DPY19L4Q7Z388 723 aa10.42□□□□□ -0.74
SS18-225ENST00000585121 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.42□□□□□ -0.74
SS18-225ENST00000585121 SPERTQ8NA61 448 aa10.42□□□□□ -0.74
SS18-225ENST00000585121 PAPD5Q8NDF8 572 aaKnown RBP10.42□□□□□ -0.74
SS18-225ENST00000585121 NANPQ8TBE9 248 aa10.42□□□□□ -0.74
SS18-225ENST00000585121 SIGLEC11Q96RL6 698 aa10.42□□□□□ -0.74
SS18-225ENST00000585121 REPIN1Q9BWE0 567 aaKnown RBP10.42□□□□□ -0.74
SS18-225ENST00000585121 TMPRSS13Q9BYE2 586 aa10.42□□□□□ -0.74
SS18-225ENST00000585121 MRPL15Q9P015 296 aaKnown RBP10.42□□□□□ -0.74
SS18-225ENST00000585121 MIOXQ9UGB7 285 aa10.42□□□□□ -0.74
SS18-225ENST00000585121 LOC105371242A0A075B767 164 aa10.41□□□□□ -0.74
SS18-225ENST00000585121 IGHV3-64DA0A0J9YX35 117 aa10.41□□□□□ -0.74
SS18-225ENST00000585121 A0A1B0GWJ7 208 aa10.41□□□□□ -0.74
SS18-225ENST00000585121 PRKACGP22612 351 aa10.41□□□□□ -0.74
SS18-225ENST00000585121 CA6P23280 308 aa10.41□□□□□ -0.74
SS18-225ENST00000585121 DDOSTP39656 456 aa10.41□□□□□ -0.74
SS18-225ENST00000585121 CD200P41217 278 aa10.41□□□□□ -0.74
SS18-225ENST00000585121 GATA4P43694 442 aa10.41□□□□□ -0.74
SS18-225ENST00000585121 CX3CR1P49238 355 aa10.41□□□□□ -0.74
SS18-225ENST00000585121 SNCBQ16143 134 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms