RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 MLNRO43193 412 aa13.76□□□□□ -0.21
ERBB2-222ENST00000584908 XRCC2O43543 280 aa13.76□□□□□ -0.21
ERBB2-222ENST00000584908 CDC14BO60729 498 aa13.76□□□□□ -0.21
ERBB2-222ENST00000584908 H2BFMP0C1H6 154 aa13.76□□□□□ -0.21
ERBB2-222ENST00000584908 HOXB4P17483 251 aaPredicted RBP13.76□□□□□ -0.21
ERBB2-222ENST00000584908 TNFRSF1AP19438 455 aa13.76□□□□□ -0.21
ERBB2-222ENST00000584908 HSD11B1P28845 292 aa13.76□□□□□ -0.21
ERBB2-222ENST00000584908 RAD23AP54725 363 aa13.76□□□□□ -0.21
ERBB2-222ENST00000584908 ROM1Q03395 351 aa13.76□□□□□ -0.21
ERBB2-222ENST00000584908 GLYATL3Q5SZD4 288 aa13.76□□□□□ -0.21
ERBB2-222ENST00000584908 C6orf52Q5T4I8 152 aa13.76□□□□□ -0.21
ERBB2-222ENST00000584908 CYB5R2Q6BCY4 276 aa13.76□□□□□ -0.21
ERBB2-222ENST00000584908 DEGS2Q6QHC5 323 aa13.76□□□□□ -0.21
ERBB2-222ENST00000584908 MRPL21Q7Z2W9 205 aaKnown RBP13.76□□□□□ -0.21
ERBB2-222ENST00000584908 BCDIN3DQ7Z5W3 292 aaKnown RBP13.76□□□□□ -0.21
ERBB2-222ENST00000584908 OR5AS1Q8N127 324 aa13.76□□□□□ -0.21
ERBB2-222ENST00000584908 CBR4Q8N4T8 237 aa13.76□□□□□ -0.21
ERBB2-222ENST00000584908 OR52H1Q8NGJ2 320 aa13.76□□□□□ -0.21
ERBB2-222ENST00000584908 THEM6Q8WUY1 208 aa13.76□□□□□ -0.21
ERBB2-222ENST00000584908 IL4I1Q96RQ9 567 aa13.76□□□□□ -0.21
ERBB2-222ENST00000584908 CNN2Q99439 309 aaKnown RBP13.76□□□□□ -0.21
ERBB2-222ENST00000584908 H2AFY2Q9P0M6 372 aaPredicted RBP13.76□□□□□ -0.21
ERBB2-222ENST00000584908 LAMP5Q9UJQ1 280 aa13.76□□□□□ -0.21
ERBB2-222ENST00000584908 ORC6Q9Y5N6 252 aa13.76□□□□□ -0.21
ERBB2-222ENST00000584908 CACNG2Q9Y698 323 aa13.76□□□□□ -0.21
ERBB2-222ENST00000584908 TMEM14AQ9Y6G1 99 aa13.76□□□□□ -0.21
ERBB2-222ENST00000584908 ANK3Q12955 4377 aaKnown RBP13.76□□□□□ -0.21
ERBB2-222ENST00000584908 MXRA5Q9NR99 2828 aa13.75□□□□□ -0.21
ERBB2-222ENST00000584908 LRP5LA4QPB2 252 aa13.75□□□□□ -0.21
ERBB2-222ENST00000584908 CD300LBA8K4G0 201 aa13.75□□□□□ -0.21
ERBB2-222ENST00000584908 PPIHO43447 177 aaKnown RBP13.75□□□□□ -0.21
ERBB2-222ENST00000584908 SLC2A1P11166 492 aa13.75□□□□□ -0.21
ERBB2-222ENST00000584908 ZNF121P58317 390 aaPredicted RBP13.75□□□□□ -0.21
ERBB2-222ENST00000584908 CDC42P60953 191 aa13.75□□□□□ -0.21
ERBB2-222ENST00000584908 SLC3A1Q07837 685 aa13.75□□□□□ -0.21
ERBB2-222ENST00000584908 SLC25A30Q5SVS4 291 aa13.75□□□□□ -0.21
ERBB2-222ENST00000584908 KCTD18Q6PI47 426 aaPredicted RBP13.75□□□□□ -0.21
ERBB2-222ENST00000584908 BHLHE23Q8NDY6 225 aa13.75□□□□□ -0.21
ERBB2-222ENST00000584908 OR2AE1Q8NHA4 323 aa13.75□□□□□ -0.21
ERBB2-222ENST00000584908 TRUB1Q8WWH5 349 aaKnown RBP13.75□□□□□ -0.21
ERBB2-222ENST00000584908 ASB17Q8WXJ9 295 aa13.75□□□□□ -0.21
ERBB2-222ENST00000584908 OR2V2Q96R30 315 aa13.75□□□□□ -0.21
ERBB2-222ENST00000584908 MNTQ99583 582 aa13.75□□□□□ -0.21
ERBB2-222ENST00000584908 ADGRL4Q9HBW9 690 aa13.75□□□□□ -0.21
ERBB2-222ENST00000584908 TMEM100Q9NV29 134 aa13.75□□□□□ -0.21
ERBB2-222ENST00000584908 TMEM160Q9NX00 188 aa13.75□□□□□ -0.21
ERBB2-222ENST00000584908 WARS2Q9UGM6 360 aaKnown RBP13.75□□□□□ -0.21
ERBB2-222ENST00000584908 CLDN25C9JDP6 229 aa13.74□□□□□ -0.21
ERBB2-222ENST00000584908 INAFM1C9JVW0 142 aa13.74□□□□□ -0.21
ERBB2-222ENST00000584908 IL2RGP31785 369 aa13.74□□□□□ -0.21
ERBB2-222ENST00000584908 DCTDP32321 178 aa13.74□□□□□ -0.21
ERBB2-222ENST00000584908 GATA4P43694 442 aa13.74□□□□□ -0.21
ERBB2-222ENST00000584908 HCCSP53701 268 aa13.74□□□□□ -0.21
ERBB2-222ENST00000584908 PSMA6P60900 246 aaKnown RBP13.74□□□□□ -0.21
ERBB2-222ENST00000584908 TMED1Q13445 227 aa13.74□□□□□ -0.21
ERBB2-222ENST00000584908 LRRN1Q6UXK5 716 aa13.74□□□□□ -0.21
ERBB2-222ENST00000584908 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.74□□□□□ -0.21
ERBB2-222ENST00000584908 CELF2-AS1Q8N7Q2 184 aa13.74□□□□□ -0.21
ERBB2-222ENST00000584908 CLDND2Q8NHS1 167 aa13.74□□□□□ -0.21
ERBB2-222ENST00000584908 ITLN1Q8WWA0 313 aa13.74□□□□□ -0.21
ERBB2-222ENST00000584908 CCL17Q92583 94 aa13.74□□□□□ -0.21
ERBB2-222ENST00000584908 SGK3Q96BR1 496 aa13.74□□□□□ -0.21
ERBB2-222ENST00000584908 MSI2Q96DH6 328 aaKnown RBP13.74□□□□□ -0.21
ERBB2-222ENST00000584908 SLC29A1Q99808 456 aa13.74□□□□□ -0.21
ERBB2-222ENST00000584908 SOX7Q9BT81 388 aa13.74□□□□□ -0.21
ERBB2-222ENST00000584908 SLC22A4Q9H015 551 aa13.74□□□□□ -0.21
ERBB2-222ENST00000584908 RGCCQ9H4X1 137 aa13.74□□□□□ -0.21
ERBB2-222ENST00000584908 MRPL15Q9P015 296 aaKnown RBP13.74□□□□□ -0.21
ERBB2-222ENST00000584908 ZNF319Q9P2F9 582 aa13.74□□□□□ -0.21
ERBB2-222ENST00000584908 LRP12Q9Y561 859 aa13.74□□□□□ -0.21
ERBB2-222ENST00000584908 ACOD1A6NK06 481 aa13.73□□□□□ -0.21
ERBB2-222ENST00000584908 A8MV72 311 aaPredicted RBP13.73□□□□□ -0.21
ERBB2-222ENST00000584908 H0YL77 283 aa13.73□□□□□ -0.21
ERBB2-222ENST00000584908 IFNL4K9M1U5 179 aa13.73□□□□□ -0.21
ERBB2-222ENST00000584908 WNT9BO14905 357 aa13.73□□□□□ -0.21
ERBB2-222ENST00000584908 ZNF254O75437 659 aa13.73□□□□□ -0.21
ERBB2-222ENST00000584908 ANXA2P07355 339 aaKnown RBP13.73□□□□□ -0.21
ERBB2-222ENST00000584908 MRPL3P09001 348 aaKnown RBP13.73□□□□□ -0.21
ERBB2-222ENST00000584908 SBK2P0C263 348 aa13.73□□□□□ -0.21
ERBB2-222ENST00000584908 CFL1P23528 166 aaKnown RBP13.73□□□□□ -0.21
ERBB2-222ENST00000584908 HTR1FP30939 366 aa13.73□□□□□ -0.21
ERBB2-222ENST00000584908 DDOSTP39656 456 aa13.73□□□□□ -0.21
ERBB2-222ENST00000584908 PRSS12P56730 875 aa13.73□□□□□ -0.21
ERBB2-222ENST00000584908 LMO4P61968 165 aa13.73□□□□□ -0.21
ERBB2-222ENST00000584908 FAM3AP98173 230 aa13.73□□□□□ -0.21
ERBB2-222ENST00000584908 POU4F2Q12837 409 aa13.73□□□□□ -0.21
ERBB2-222ENST00000584908 ZNF679Q8IYX0 411 aa13.73□□□□□ -0.21
ERBB2-222ENST00000584908 OR10AD1Q8NGE0 317 aa13.73□□□□□ -0.21
ERBB2-222ENST00000584908 SPRYD4Q8WW59 207 aaPredicted RBP13.73□□□□□ -0.21
ERBB2-222ENST00000584908 RAB1CQ92928 201 aa13.73□□□□□ -0.21
ERBB2-222ENST00000584908 STMN2Q93045 179 aa13.73□□□□□ -0.21
ERBB2-222ENST00000584908 TIMD4Q96H15 378 aa13.73□□□□□ -0.21
ERBB2-222ENST00000584908 POM121Q96HA1 1249 aa13.73□□□□□ -0.21
ERBB2-222ENST00000584908 MEGF10Q96KG7 1140 aa13.73□□□□□ -0.21
ERBB2-222ENST00000584908 GCM1Q9NP62 436 aa13.73□□□□□ -0.21
ERBB2-222ENST00000584908 CLN6Q9NWW5 311 aa13.73□□□□□ -0.21
ERBB2-222ENST00000584908 DNAJC27Q9NZQ0 273 aa13.73□□□□□ -0.21
ERBB2-222ENST00000584908 ZNF391Q9UJN7 358 aa13.73□□□□□ -0.21
ERBB2-222ENST00000584908 COPS3Q9UNS2 423 aa13.73□□□□□ -0.21
ERBB2-222ENST00000584908 PPP1R3CQ9UQK1 317 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms