RNA–Protein interactions for RNA: ENST00000584754.1

PPP4R1-229, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 5

Gene PPP4R1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-229	ENST00000584754	SIAE	Q9HAT2	523 aa		2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	PDF	Q9HBH1	243 aa		2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	CSNK1G1	Q9HCP0	422 aa		2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	DCAF16	Q9NXF7	216 aa		2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	SHPK	Q9UHJ6	478 aa		2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	STOML2	Q9UJZ1	356 aa		2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	SCML1	Q9UN30	329 aa		2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	ZNF256	Q9Y2P7	627 aa	Predicted RBP	2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	SLC25A15	Q9Y619	301 aa		2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	DOCK4	Q8N1I0	1966 aa		2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	PIKFYVE	Q9Y2I7	2098 aa		2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	PRRC2A	P48634	2157 aa	Known RBP	2.56	□□□□□ -2
PPP4R1-229	ENST00000584754		A0A0G2JRQ6	117 aa		2.55	□□□□□ -2
PPP4R1-229	ENST00000584754	GOLGA8O	A6NCC3	632 aa		2.55	□□□□□ -2
PPP4R1-229	ENST00000584754	BTBD17	A6NE02	478 aa		2.55	□□□□□ -2
PPP4R1-229	ENST00000584754	ANKRD36	A6QL64	1941 aa		2.55	□□□□□ -2
PPP4R1-229	ENST00000584754		E9PBE3	544 aa		2.55	□□□□□ -2
PPP4R1-229	ENST00000584754	GOLGA8N	F8WBI6	632 aa		2.55	□□□□□ -2
PPP4R1-229	ENST00000584754	PRAMEF26	H0Y7S4	382 aa		2.55	□□□□□ -2
PPP4R1-229	ENST00000584754		H0Y9J4	135 aa		2.55	□□□□□ -2
PPP4R1-229	ENST00000584754		H3BNH8	94 aa		2.55	□□□□□ -2
PPP4R1-229	ENST00000584754	TMEM50A	O95807	157 aa		2.55	□□□□□ -2
PPP4R1-229	ENST00000584754	CRYGB	P07316	175 aa		2.55	□□□□□ -2
PPP4R1-229	ENST00000584754	KRT7	P08729	469 aa		2.55	□□□□□ -2
PPP4R1-229	ENST00000584754	DUX4L4	P0CJ87	422 aa		2.55	□□□□□ -2
PPP4R1-229	ENST00000584754	CXCR2	P25025	360 aa		2.55	□□□□□ -2
PPP4R1-229	ENST00000584754	FMO3	P31513	532 aa		2.55	□□□□□ -2
PPP4R1-229	ENST00000584754	RORA	P35398	523 aa		2.55	□□□□□ -2
PPP4R1-229	ENST00000584754	NUDT1	P36639	197 aa		2.55	□□□□□ -2
PPP4R1-229	ENST00000584754	CSK	P41240	450 aa		2.55	□□□□□ -2
PPP4R1-229	ENST00000584754	TFPI2	P48307	235 aa		2.55	□□□□□ -2
PPP4R1-229	ENST00000584754	SH3BGR	P55822	239 aa	Predicted RBP	2.55	□□□□□ -2
PPP4R1-229	ENST00000584754	MYL6	P60660	151 aa		2.55	□□□□□ -2
PPP4R1-229	ENST00000584754	TNNC1	P63316	161 aa		2.55	□□□□□ -2
PPP4R1-229	ENST00000584754	EIF3I	Q13347	325 aa	Known RBP	2.55	□□□□□ -2
PPP4R1-229	ENST00000584754	TGFBI	Q15582	683 aa		2.55	□□□□□ -2
PPP4R1-229	ENST00000584754	ZNF79	Q15937	498 aa		2.55	□□□□□ -2
PPP4R1-229	ENST00000584754	DEFB133	Q30KQ1	61 aa		2.55	□□□□□ -2
PPP4R1-229	ENST00000584754	VPS26B	Q4G0F5	336 aa		2.55	□□□□□ -2
PPP4R1-229	ENST00000584754	TPRG1L	Q5T0D9	272 aa		2.55	□□□□□ -2
PPP4R1-229	ENST00000584754	GPRC6A	Q5T6X5	926 aa		2.55	□□□□□ -2
PPP4R1-229	ENST00000584754	ANKRD12	Q6UB98	2062 aa		2.55	□□□□□ -2
PPP4R1-229	ENST00000584754	CLEC20A	Q6ZU45	233 aa		2.55	□□□□□ -2
PPP4R1-229	ENST00000584754	CAMK2N1	Q7Z7J9	78 aa		2.55	□□□□□ -2
PPP4R1-229	ENST00000584754	ZNF546	Q86UE3	836 aa		2.55	□□□□□ -2
PPP4R1-229	ENST00000584754	PSTK	Q8IV42	348 aa	Known RBP	2.55	□□□□□ -2
PPP4R1-229	ENST00000584754	SLC22A9	Q8IVM8	553 aa		2.55	□□□□□ -2
PPP4R1-229	ENST00000584754	INTS1	Q8N201	2190 aa	Known RBP	2.55	□□□□□ -2
PPP4R1-229	ENST00000584754	STK40	Q8N2I9	435 aa		2.55	□□□□□ -2
PPP4R1-229	ENST00000584754	BBS5	Q8N3I7	341 aa		2.55	□□□□□ -2
PPP4R1-229	ENST00000584754	ZNF740	Q8NDX6	193 aa		2.55	□□□□□ -2
PPP4R1-229	ENST00000584754	OR4F6	Q8NGB9	312 aa		2.55	□□□□□ -2
PPP4R1-229	ENST00000584754	KLK6	Q92876	244 aa		2.55	□□□□□ -2
PPP4R1-229	ENST00000584754	MCUR1	Q96AQ8	359 aa		2.55	□□□□□ -2
PPP4R1-229	ENST00000584754	DOCK10	Q96BY6	2186 aa		2.55	□□□□□ -2
PPP4R1-229	ENST00000584754	DNAJC19	Q96DA6	116 aa		2.55	□□□□□ -2
PPP4R1-229	ENST00000584754	TMA16	Q96EY4	203 aa	Known RBP	2.55	□□□□□ -2
PPP4R1-229	ENST00000584754	C8orf76	Q96K31	380 aa		2.55	□□□□□ -2
PPP4R1-229	ENST00000584754	OXGR1	Q96P68	337 aa		2.55	□□□□□ -2
PPP4R1-229	ENST00000584754	KCNA7	Q96RP8	456 aa		2.55	□□□□□ -2
PPP4R1-229	ENST00000584754	TMEM246	Q9BRR3	403 aa		2.55	□□□□□ -2
PPP4R1-229	ENST00000584754	NAT9	Q9BTE0	207 aa		2.55	□□□□□ -2
PPP4R1-229	ENST00000584754	CALN1	Q9BXU9	219 aa		2.55	□□□□□ -2
PPP4R1-229	ENST00000584754	GON7	Q9BXV9	100 aa		2.55	□□□□□ -2
PPP4R1-229	ENST00000584754	FAM49B	Q9NUQ9	324 aa		2.55	□□□□□ -2
PPP4R1-229	ENST00000584754	HMGXB4	Q9UGU5	601 aa		2.55	□□□□□ -2
PPP4R1-229	ENST00000584754	PRO0461	Q9UI25	63 aa		2.55	□□□□□ -2
PPP4R1-229	ENST00000584754	CCDC88C	Q9P219	2028 aa		2.54	□□□□□ -2
PPP4R1-229	ENST00000584754	NSG1	A0A0A6YYJ2	146 aa		2.54	□□□□□ -2
PPP4R1-229	ENST00000584754	SPTY2D1-AS1	A0A0U1RR47	76 aa		2.54	□□□□□ -2
PPP4R1-229	ENST00000584754	GOLGA6L7	A0A1B0GV03	622 aa		2.54	□□□□□ -2
PPP4R1-229	ENST00000584754	ZNF233	A6NK53	670 aa		2.54	□□□□□ -2
PPP4R1-229	ENST00000584754	ZNF716	A6NP11	495 aa		2.54	□□□□□ -2
PPP4R1-229	ENST00000584754		D6RAR5	112 aa		2.54	□□□□□ -2
PPP4R1-229	ENST00000584754	TMX2-CTNND1	H3BSU7	103 aa		2.54	□□□□□ -2
PPP4R1-229	ENST00000584754	GFY	I3L273	518 aa		2.54	□□□□□ -2
PPP4R1-229	ENST00000584754		K7EM74	188 aa		2.54	□□□□□ -2
PPP4R1-229	ENST00000584754	XKRY	O14609	159 aa		2.54	□□□□□ -2
PPP4R1-229	ENST00000584754	SLC31A1	O15431	190 aa		2.54	□□□□□ -2
PPP4R1-229	ENST00000584754	AQP9	O43315	295 aa		2.54	□□□□□ -2
PPP4R1-229	ENST00000584754	UPK3A	O75631	287 aa		2.54	□□□□□ -2
PPP4R1-229	ENST00000584754	OR7A10	O76100	309 aa		2.54	□□□□□ -2
PPP4R1-229	ENST00000584754	SERPIND1	P05546	499 aa		2.54	□□□□□ -2
PPP4R1-229	ENST00000584754	ZNF735	P0CB33	412 aa		2.54	□□□□□ -2
PPP4R1-229	ENST00000584754	NCK1	P16333	377 aa		2.54	□□□□□ -2
PPP4R1-229	ENST00000584754	ZNF24	P17028	368 aa		2.54	□□□□□ -2
PPP4R1-229	ENST00000584754	NPR2	P20594	1047 aa		2.54	□□□□□ -2
PPP4R1-229	ENST00000584754	RRM2	P31350	389 aa		2.54	□□□□□ -2
PPP4R1-229	ENST00000584754	VDAC2	P45880	294 aa	Predicted RBP	2.54	□□□□□ -2
PPP4R1-229	ENST00000584754	PLP1	P60201	277 aa		2.54	□□□□□ -2
PPP4R1-229	ENST00000584754	RPS24	P62847	133 aa	Known RBP	2.54	□□□□□ -2
PPP4R1-229	ENST00000584754	CCL7	P80098	99 aa		2.54	□□□□□ -2
PPP4R1-229	ENST00000584754	MRPS22	P82650	360 aa	Known RBP	2.54	□□□□□ -2
PPP4R1-229	ENST00000584754	CYP24A1	Q07973	514 aa		2.54	□□□□□ -2
PPP4R1-229	ENST00000584754	BST1	Q10588	318 aa		2.54	□□□□□ -2
PPP4R1-229	ENST00000584754	FZD2	Q14332	565 aa		2.54	□□□□□ -2
PPP4R1-229	ENST00000584754	PRPSAP1	Q14558	356 aa		2.54	□□□□□ -2
PPP4R1-229	ENST00000584754	RCN1	Q15293	331 aa		2.54	□□□□□ -2
PPP4R1-229	ENST00000584754	SNRNP35	Q16560	246 aa	Known RBP	2.54	□□□□□ -2
PPP4R1-229	ENST00000584754	KRTAP13-3	Q3SY46	172 aa		2.54	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms