RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 LIPKQ5VXJ0 399 aa14.13□□□□□ -0.15
CDK5RAP3-228ENST00000583363 ARL9Q6T311 187 aa14.13□□□□□ -0.15
CDK5RAP3-228ENST00000583363 PHC2Q8IXK0 858 aa14.13□□□□□ -0.15
CDK5RAP3-228ENST00000583363 GHSRQ92847 366 aa14.13□□□□□ -0.15
CDK5RAP3-228ENST00000583363 SMIM19Q96E16 107 aa14.13□□□□□ -0.15
CDK5RAP3-228ENST00000583363 PGAM5Q96HS1 289 aa14.13□□□□□ -0.15
CDK5RAP3-228ENST00000583363 MOB1AQ9H8S9 216 aa14.13□□□□□ -0.15
CDK5RAP3-228ENST00000583363 EIF3KQ9UBQ5 218 aaKnown RBP14.13□□□□□ -0.15
CDK5RAP3-228ENST00000583363 NUFIP1Q9UHK0 495 aaKnown RBP14.13□□□□□ -0.15
CDK5RAP3-228ENST00000583363 KLF2Q9Y5W3 355 aaPredicted RBP14.13□□□□□ -0.15
CDK5RAP3-228ENST00000583363 HEATR1Q9H583 2144 aaKnown RBP14.12□□□□□ -0.15
CDK5RAP3-228ENST00000583363 IGHV2OR16-5A0A0B4J2B6 119 aa14.12□□□□□ -0.15
CDK5RAP3-228ENST00000583363 PNMA8CA0A1B0GUJ8 204 aa14.12□□□□□ -0.15
CDK5RAP3-228ENST00000583363 CCRL2O00421 344 aa14.12□□□□□ -0.15
CDK5RAP3-228ENST00000583363 ZFPL1O95159 310 aa14.12□□□□□ -0.15
CDK5RAP3-228ENST00000583363 TTRP02766 147 aa14.12□□□□□ -0.15
CDK5RAP3-228ENST00000583363 IGFBP2P18065 325 aa14.12□□□□□ -0.15
CDK5RAP3-228ENST00000583363 CD53P19397 219 aa14.12□□□□□ -0.15
CDK5RAP3-228ENST00000583363 PTAFRP25105 342 aa14.12□□□□□ -0.15
CDK5RAP3-228ENST00000583363 CALCRP30988 508 aa14.12□□□□□ -0.15
CDK5RAP3-228ENST00000583363 RGS6P49758 472 aa14.12□□□□□ -0.15
CDK5RAP3-228ENST00000583363 SNAI3Q3KNW1 292 aa14.12□□□□□ -0.15
CDK5RAP3-228ENST00000583363 BCL2L15Q5TBC7 163 aa14.12□□□□□ -0.15
CDK5RAP3-228ENST00000583363 OR8B12Q8NGG6 310 aa14.12□□□□□ -0.15
CDK5RAP3-228ENST00000583363 OR52H1Q8NGJ2 320 aa14.12□□□□□ -0.15
CDK5RAP3-228ENST00000583363 OR13F1Q8NGS4 319 aa14.12□□□□□ -0.15
CDK5RAP3-228ENST00000583363 APOBEC3DQ96AK3 386 aaPredicted RBP14.12□□□□□ -0.15
CDK5RAP3-228ENST00000583363 SGK3Q96BR1 496 aa14.12□□□□□ -0.15
CDK5RAP3-228ENST00000583363 PGLYRP3Q96LB9 341 aa14.12□□□□□ -0.15
CDK5RAP3-228ENST00000583363 PDCD1LG2Q9BQ51 273 aa14.12□□□□□ -0.15
CDK5RAP3-228ENST00000583363 OR10A2Q9H208 303 aa14.12□□□□□ -0.15
CDK5RAP3-228ENST00000583363 GTF2A1LQ9UNN4 478 aa14.12□□□□□ -0.15
CDK5RAP3-228ENST00000583363 SF3B6Q9Y3B4 125 aaKnown RBP14.12□□□□□ -0.15
CDK5RAP3-228ENST00000583363 TMEM212A6NML5 194 aa14.11□□□□□ -0.15
CDK5RAP3-228ENST00000583363 NGFP01138 241 aa14.11□□□□□ -0.15
CDK5RAP3-228ENST00000583363 ISG15P05161 165 aa14.11□□□□□ -0.15
CDK5RAP3-228ENST00000583363 KIR2DL3P43628 341 aa14.11□□□□□ -0.15
CDK5RAP3-228ENST00000583363 UCP2P55851 309 aa14.11□□□□□ -0.15
CDK5RAP3-228ENST00000583363 TMEM108Q6UXF1 575 aa14.11□□□□□ -0.15
CDK5RAP3-228ENST00000583363 ZNF704Q6ZNC4 412 aaPredicted RBP14.11□□□□□ -0.15
CDK5RAP3-228ENST00000583363 DMRTC2Q8IXT2 367 aaPredicted RBP14.11□□□□□ -0.15
CDK5RAP3-228ENST00000583363 RDH10Q8IZV5 341 aa14.11□□□□□ -0.15
CDK5RAP3-228ENST00000583363 OR5AK2Q8NH90 309 aa14.11□□□□□ -0.15
CDK5RAP3-228ENST00000583363 YIPF6Q96EC8 236 aa14.11□□□□□ -0.15
CDK5RAP3-228ENST00000583363 ZNF281Q9Y2X9 895 aa14.11□□□□□ -0.15
CDK5RAP3-228ENST00000583363 STARD10Q9Y365 291 aa14.11□□□□□ -0.15
CDK5RAP3-228ENST00000583363 TACC2O95359 2948 aa14.1□□□□□ -0.15
CDK5RAP3-228ENST00000583363 A0A0U1RQV5 110 aa14.1□□□□□ -0.15
CDK5RAP3-228ENST00000583363 A0A1B0GTI1 187 aa14.1□□□□□ -0.15
CDK5RAP3-228ENST00000583363 J3QW42 95 aa14.1□□□□□ -0.15
CDK5RAP3-228ENST00000583363 CASKO14936 926 aa14.1□□□□□ -0.15
CDK5RAP3-228ENST00000583363 TBX1O43435 398 aa14.1□□□□□ -0.15
CDK5RAP3-228ENST00000583363 GPRIN2O60269 458 aa14.1□□□□□ -0.15
CDK5RAP3-228ENST00000583363 IGLV3-1P01715 115 aa14.1□□□□□ -0.15
CDK5RAP3-228ENST00000583363 CRYAAP02489 173 aa14.1□□□□□ -0.15
CDK5RAP3-228ENST00000583363 CD36P16671 472 aa14.1□□□□□ -0.15
CDK5RAP3-228ENST00000583363 TGFBR2P37173 567 aa14.1□□□□□ -0.15
CDK5RAP3-228ENST00000583363 RAD52P43351 418 aa14.1□□□□□ -0.15
CDK5RAP3-228ENST00000583363 ODF4Q2M2E3 257 aa14.1□□□□□ -0.15
CDK5RAP3-228ENST00000583363 NCMAPQ5T1S8 102 aa14.1□□□□□ -0.15
CDK5RAP3-228ENST00000583363 TMEM244Q5VVB8 128 aa14.1□□□□□ -0.15
CDK5RAP3-228ENST00000583363 GPR141Q7Z602 305 aa14.1□□□□□ -0.15
CDK5RAP3-228ENST00000583363 ZNF101Q8IZC7 436 aa14.1□□□□□ -0.15
CDK5RAP3-228ENST00000583363 MS4A15Q8N5U1 240 aa14.1□□□□□ -0.15
CDK5RAP3-228ENST00000583363 ZNF676Q8N7Q3 588 aa14.1□□□□□ -0.15
CDK5RAP3-228ENST00000583363 ACBD4Q8NC06 268 aa14.1□□□□□ -0.15
CDK5RAP3-228ENST00000583363 OR5L1Q8NGL2 311 aa14.1□□□□□ -0.15
CDK5RAP3-228ENST00000583363 LURAP1Q96LR2 239 aa14.1□□□□□ -0.15
CDK5RAP3-228ENST00000583363 COMMD4Q9H0A8 199 aa14.1□□□□□ -0.15
CDK5RAP3-228ENST00000583363 SLC24A3Q9HC58 644 aa14.1□□□□□ -0.15
CDK5RAP3-228ENST00000583363 NDUFB11Q9NX14 153 aa14.1□□□□□ -0.15
CDK5RAP3-228ENST00000583363 CRIM1Q9NZV1 1036 aa14.1□□□□□ -0.15
CDK5RAP3-228ENST00000583363 P2RY10O00398 339 aa14.09□□□□□ -0.15
CDK5RAP3-228ENST00000583363 SMPD2O60906 423 aa14.09□□□□□ -0.15
CDK5RAP3-228ENST00000583363 UBCP0CG48 685 aaKnown RBP14.09□□□□□ -0.15
CDK5RAP3-228ENST00000583363 NR4A1P22736 598 aa14.09□□□□□ -0.15
CDK5RAP3-228ENST00000583363 RPS11P62280 158 aaKnown RBP eCLIP14.09□□□□□ -0.15
CDK5RAP3-228ENST00000583363 RPS25P62851 125 aaKnown RBP14.09□□□□□ -0.15
CDK5RAP3-228ENST00000583363 BSPH1Q075Z2 132 aa14.09□□□□□ -0.15
CDK5RAP3-228ENST00000583363 GLYATL3Q5SZD4 288 aa14.09□□□□□ -0.15
CDK5RAP3-228ENST00000583363 UNQ6126/PRO20091Q6UXV3 157 aa14.09□□□□□ -0.15
CDK5RAP3-228ENST00000583363 SATL1Q86VE3 508 aa14.09□□□□□ -0.15
CDK5RAP3-228ENST00000583363 C1orf174Q8IYL3 243 aa14.09□□□□□ -0.15
CDK5RAP3-228ENST00000583363 ABHD4Q8TB40 342 aa14.09□□□□□ -0.15
CDK5RAP3-228ENST00000583363 OR51E1Q8TCB6 317 aa14.09□□□□□ -0.15
CDK5RAP3-228ENST00000583363 FAM222BQ8WU58 562 aa14.09□□□□□ -0.15
CDK5RAP3-228ENST00000583363 SPSB4Q96A44 273 aa14.09□□□□□ -0.15
CDK5RAP3-228ENST00000583363 PLPPR2Q96GM1 343 aa14.09□□□□□ -0.15
CDK5RAP3-228ENST00000583363 LYZL4Q96KX0 146 aa14.09□□□□□ -0.15
CDK5RAP3-228ENST00000583363 KCNS3Q9BQ31 491 aa14.09□□□□□ -0.15
CDK5RAP3-228ENST00000583363 RGCCQ9H4X1 137 aa14.09□□□□□ -0.15
CDK5RAP3-228ENST00000583363 ESRP2Q9H6T0 727 aaKnown RBP14.09□□□□□ -0.15
CDK5RAP3-228ENST00000583363 SPEF1Q9Y4P9 236 aa14.09□□□□□ -0.15
CDK5RAP3-228ENST00000583363 HIVEP1P15822 2718 aa14.09□□□□□ -0.15
CDK5RAP3-228ENST00000583363 CADP27708 2225 aa14.09□□□□□ -0.15
CDK5RAP3-228ENST00000583363 XRCC2O43543 280 aa14.08□□□□□ -0.16
CDK5RAP3-228ENST00000583363 ATE1O95260 518 aa14.08□□□□□ -0.16
CDK5RAP3-228ENST00000583363 FAM157BP0CG42 384 aa14.08□□□□□ -0.16
CDK5RAP3-228ENST00000583363 ACHEP22303 614 aa14.08□□□□□ -0.16
CDK5RAP3-228ENST00000583363 CCL1P22362 96 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms