RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 MS4A8Q9BY19 250 aa3.3□□□□□ -1.88
SMCHD1-208ENST00000583344 PRRG3Q9BZD7 231 aa3.3□□□□□ -1.88
SMCHD1-208ENST00000583344 MED28Q9H204 178 aa3.3□□□□□ -1.88
SMCHD1-208ENST00000583344 OR51B5Q9H339 312 aa3.3□□□□□ -1.88
SMCHD1-208ENST00000583344 DPEP2Q9H4A9 486 aa3.3□□□□□ -1.88
SMCHD1-208ENST00000583344 B3GAT2Q9NPZ5 323 aa3.3□□□□□ -1.88
SMCHD1-208ENST00000583344 NANSQ9NR45 359 aa3.3□□□□□ -1.88
SMCHD1-208ENST00000583344 SPHK2Q9NRA0 654 aa3.3□□□□□ -1.88
SMCHD1-208ENST00000583344 INPP5EQ9NRR6 644 aa3.3□□□□□ -1.88
SMCHD1-208ENST00000583344 FAM212BQ9NTI7 297 aaPredicted RBP3.3□□□□□ -1.88
SMCHD1-208ENST00000583344 IMP3Q9NV31 184 aaKnown RBP3.3□□□□□ -1.88
SMCHD1-208ENST00000583344 MCUBQ9NWR8 336 aa3.3□□□□□ -1.88
SMCHD1-208ENST00000583344 BABAM2Q9NXR7 383 aa3.3□□□□□ -1.88
SMCHD1-208ENST00000583344 ABRACLQ9P1F3 81 aa3.3□□□□□ -1.88
SMCHD1-208ENST00000583344 GLS2Q9UI32 602 aa3.3□□□□□ -1.88
SMCHD1-208ENST00000583344 TEKT2Q9UIF3 430 aa3.3□□□□□ -1.88
SMCHD1-208ENST00000583344 LSM7Q9UK45 103 aaKnown RBP3.3□□□□□ -1.88
SMCHD1-208ENST00000583344 CLEC4EQ9ULY5 219 aa3.3□□□□□ -1.88
SMCHD1-208ENST00000583344 MGAT4AQ9UM21 535 aa3.3□□□□□ -1.88
SMCHD1-208ENST00000583344 ENTPD4Q9Y227 616 aa3.3□□□□□ -1.88
SMCHD1-208ENST00000583344 NCKAP1Q9Y2A7 1128 aa3.3□□□□□ -1.88
SMCHD1-208ENST00000583344 SLC9A8Q9Y2E8 581 aa3.3□□□□□ -1.88
SMCHD1-208ENST00000583344 HSPB11Q9Y547 144 aa3.3□□□□□ -1.88
SMCHD1-208ENST00000583344 CACNG2Q9Y698 323 aa3.3□□□□□ -1.88
SMCHD1-208ENST00000583344 A0A087WZY1 265 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 TRAV19A0A0A6YYK7 116 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 NAP1L6A6NFF2 107 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 OR6C65A6NJZ3 312 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 ANHXE9PGG2 379 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 F8WDY8 70 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 PLPP1O14494 284 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 SLC9A3R1O14745 358 aaPredicted RBP3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 ZNF749O43361 778 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 RNF13O43567 381 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 SULT1B1O43704 296 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 PRAF2O60831 178 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 OR7A10O76100 309 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 OR2A4O95047 310 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 SOX14O95416 240 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 IGHV2-70P01814 119 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 BCHEP06276 602 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 HOXD4P09016 255 aaPredicted RBP3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 ANXA3P12429 323 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 EPCAMP16422 314 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 CELP19835 753 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 C4BPBP20851 252 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 F8A1P23610 371 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 STOMP27105 288 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 PDHA2P29803 388 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 CD70P32970 193 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 EVI2BP34910 448 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 TALDO1P37837 337 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 INPP1P49441 399 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 ACLYP53396 1101 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 CAV3P56539 151 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 SNRPD2P62316 118 aaKnown RBP3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 TBPL1P62380 186 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 DHODHQ02127 395 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 HSF2Q03933 536 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 PUDPQ08623 228 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 ST3GAL3Q11203 375 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 PLD1Q13393 1074 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 TRAM2Q15035 370 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 SYPL1Q16563 259 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 ACKR1Q16570 336 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 AANATQ16613 207 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 GSG1Q2KHT4 349 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 KLHL12Q53G59 568 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 KHDRBS2Q5VWX1 349 aaKnown RBP3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 SLC22A10Q63ZE4 541 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 ZNF57Q68EA5 555 aaPredicted RBP3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 HBMQ6B0K9 141 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 ADNP2Q6IQ32 1131 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 C22orf39Q6P5X5 142 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 ZNF322Q6U7Q0 402 aaPredicted RBP3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 ARSKQ6UWY0 536 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 BAIAP2L2Q6UXY1 529 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 TMPRSS11BQ86T26 416 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 LHFPL3Q86UP9 236 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 AMZ2Q86W34 360 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 MEX3DQ86XN8 651 aaKnown RBP3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 MARCH9Q86YJ5 346 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 ZNF584Q8IVC4 421 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 UBE2J2Q8N2K1 259 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 SPICQ8N5J4 248 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 MS4A15Q8N5U1 240 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 EIF4E3Q8N5X7 224 aaKnown RBP3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 ACBD7Q8N6N7 88 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 OR11H7Q8NGC8 314 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 OR11H4Q8NGC9 324 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 OR8D4Q8NGM9 314 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 OR5M8Q8NGP6 311 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 OR56B4Q8NH76 319 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 OR5AK3PQ8NH89 298 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 NEIL3Q8TAT5 605 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 TEX47Q8TBZ9 253 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 RAET1EQ8TD07 263 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 SMAP2Q8WU79 429 aaPredicted RBP3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 SKA2Q8WVK7 121 aaPredicted RBP3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 SPRYD4Q8WW59 207 aaPredicted RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms