RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 PPP1R3DO95685 299 aa13.31□□□□□ -0.28
SREBF1-221ENST00000583080 PTBP3O95758 552 aaKnown RBP13.31□□□□□ -0.28
SREBF1-221ENST00000583080 TXNDC12O95881 172 aa13.31□□□□□ -0.28
SREBF1-221ENST00000583080 PRB2P02812 416 aaPredicted RBP13.31□□□□□ -0.28
SREBF1-221ENST00000583080 LCATP04180 440 aa13.31□□□□□ -0.28
SREBF1-221ENST00000583080 DUX4L2P0CJ85 424 aa13.31□□□□□ -0.28
SREBF1-221ENST00000583080 DUX4L3P0CJ86 424 aa13.31□□□□□ -0.28
SREBF1-221ENST00000583080 DUX4L4P0CJ87 422 aa13.31□□□□□ -0.28
SREBF1-221ENST00000583080 DUX4L5P0CJ88 424 aa13.31□□□□□ -0.28
SREBF1-221ENST00000583080 DUX4L6P0CJ89 424 aa13.31□□□□□ -0.28
SREBF1-221ENST00000583080 DUX4L7P0CJ90 424 aa13.31□□□□□ -0.28
SREBF1-221ENST00000583080 ELF3P78545 371 aaPredicted RBP13.31□□□□□ -0.28
SREBF1-221ENST00000583080 POU4F2Q12837 409 aa13.31□□□□□ -0.28
SREBF1-221ENST00000583080 KCNJ8Q15842 424 aa13.31□□□□□ -0.28
SREBF1-221ENST00000583080 PGM2L1Q6PCE3 622 aa13.31□□□□□ -0.28
SREBF1-221ENST00000583080 DUX4L9Q6RFH8 374 aaPredicted RBP13.31□□□□□ -0.28
SREBF1-221ENST00000583080 GDPGP1Q6ZNW5 385 aa13.31□□□□□ -0.28
SREBF1-221ENST00000583080 MRPL21Q7Z2W9 205 aaKnown RBP13.31□□□□□ -0.28
SREBF1-221ENST00000583080 VMO1Q7Z5L0 202 aa13.31□□□□□ -0.28
SREBF1-221ENST00000583080 FAM90A1Q86YD7 464 aa13.31□□□□□ -0.28
SREBF1-221ENST00000583080 OR6V1Q8N148 313 aa13.31□□□□□ -0.28
SREBF1-221ENST00000583080 PITX2Q99697 317 aa13.31□□□□□ -0.28
SREBF1-221ENST00000583080 ATF6BQ99941 703 aa13.31□□□□□ -0.28
SREBF1-221ENST00000583080 SIKE1Q9BRV8 207 aa13.31□□□□□ -0.28
SREBF1-221ENST00000583080 C16orf95Q9H693 158 aa13.31□□□□□ -0.28
SREBF1-221ENST00000583080 C1orf123Q9NWV4 160 aa13.31□□□□□ -0.28
SREBF1-221ENST00000583080 DUX4Q9UBX2 424 aa13.31□□□□□ -0.28
SREBF1-221ENST00000583080 B9D1Q9UPM9 204 aa13.31□□□□□ -0.28
SREBF1-221ENST00000583080 TET2Q6N021 2002 aaPredicted RBP13.3□□□□□ -0.28
SREBF1-221ENST00000583080 IGHV3OR15-7A0A075B7D8 119 aa13.3□□□□□ -0.28
SREBF1-221ENST00000583080 TRAV38-1A0A0B4J264 116 aa13.3□□□□□ -0.28
SREBF1-221ENST00000583080 LOC100653049A0A140TA62 436 aa13.3□□□□□ -0.28
SREBF1-221ENST00000583080 CD300LBA8K4G0 201 aa13.3□□□□□ -0.28
SREBF1-221ENST00000583080 CXCR6O00574 342 aa13.3□□□□□ -0.28
SREBF1-221ENST00000583080 DVL1O14640 695 aa13.3□□□□□ -0.28
SREBF1-221ENST00000583080 KRT34O76011 436 aa13.3□□□□□ -0.28
SREBF1-221ENST00000583080 CRABP1P29762 137 aa13.3□□□□□ -0.28
SREBF1-221ENST00000583080 MDH1P40925 334 aaKnown RBP13.3□□□□□ -0.28
SREBF1-221ENST00000583080 OMPP47874 163 aa13.3□□□□□ -0.28
SREBF1-221ENST00000583080 EGR3Q06889 387 aa13.3□□□□□ -0.28
SREBF1-221ENST00000583080 SF3A3Q12874 501 aaKnown RBP eCLIP13.3□□□□□ -0.281e-6■■■□□ 14.9
SREBF1-221ENST00000583080 MALLQ13021 153 aa13.3□□□□□ -0.28
SREBF1-221ENST00000583080 SEC23BQ15437 767 aa13.3□□□□□ -0.28
SREBF1-221ENST00000583080 BEAN1Q3B7T3 259 aa13.3□□□□□ -0.28
SREBF1-221ENST00000583080 SNAI3Q3KNW1 292 aa13.3□□□□□ -0.28
SREBF1-221ENST00000583080 FBLN7Q53RD9 439 aa13.3□□□□□ -0.28
SREBF1-221ENST00000583080 DNM1P34Q6PK57 102 aa13.3□□□□□ -0.28
SREBF1-221ENST00000583080 DPY19L2P2Q6ZN68 376 aa13.3□□□□□ -0.28
SREBF1-221ENST00000583080 CBLL1Q75N03 491 aa13.3□□□□□ -0.28
SREBF1-221ENST00000583080 RRM2BQ7LG56 351 aa13.3□□□□□ -0.28
SREBF1-221ENST00000583080 GCSAMQ8N6F7 178 aa13.3□□□□□ -0.28
SREBF1-221ENST00000583080 OR2AE1Q8NHA4 323 aa13.3□□□□□ -0.28
SREBF1-221ENST00000583080 ST8SIA4Q92187 359 aa13.3□□□□□ -0.28
SREBF1-221ENST00000583080 DPAGT1Q9H3H5 408 aa13.3□□□□□ -0.28
SREBF1-221ENST00000583080 FN3KQ9H479 309 aa13.3□□□□□ -0.28
SREBF1-221ENST00000583080 ANKRD19PQ9H560 264 aa13.3□□□□□ -0.28
SREBF1-221ENST00000583080 ZNRD1Q9P1U0 126 aa13.3□□□□□ -0.28
SREBF1-221ENST00000583080 VPREB3Q9UKI3 123 aa13.3□□□□□ -0.28
SREBF1-221ENST00000583080 ZNF816-ZNF321PA0A0X1KG74 233 aa13.29□□□□□ -0.28
SREBF1-221ENST00000583080 SERPINA1P01009 418 aa13.29□□□□□ -0.28
SREBF1-221ENST00000583080 CSF1P09603 554 aa13.29□□□□□ -0.28
SREBF1-221ENST00000583080 GGT2P36268 569 aa13.29□□□□□ -0.28
SREBF1-221ENST00000583080 RPS6KA3P51812 740 aa13.29□□□□□ -0.28
SREBF1-221ENST00000583080 DLX1P56177 255 aa13.29□□□□□ -0.28
SREBF1-221ENST00000583080 ZNF92Q03936 586 aa13.29□□□□□ -0.28
SREBF1-221ENST00000583080 FGD3Q5JSP0 725 aa13.29□□□□□ -0.28
SREBF1-221ENST00000583080 FKBP9P1Q75LS8 142 aa13.29□□□□□ -0.28
SREBF1-221ENST00000583080 LRTOMTQ8WZ04 291 aa13.29□□□□□ -0.28
SREBF1-221ENST00000583080 RCN3Q96D15 328 aa13.29□□□□□ -0.28
SREBF1-221ENST00000583080 MAP6Q96JE9 813 aa13.29□□□□□ -0.28
SREBF1-221ENST00000583080 ERMAPQ96PL5 475 aaPredicted RBP13.29□□□□□ -0.28
SREBF1-221ENST00000583080 NMNAT3Q96T66 252 aa13.29□□□□□ -0.28
SREBF1-221ENST00000583080 SRA1Q9HD15 236 aaKnown RBP13.29□□□□□ -0.28
SREBF1-221ENST00000583080 SAR1AQ9NR31 198 aa13.29□□□□□ -0.28
SREBF1-221ENST00000583080 GID8Q9NWU2 228 aa13.29□□□□□ -0.28
SREBF1-221ENST00000583080 ADA2Q9NZK5 511 aa13.29□□□□□ -0.28
SREBF1-221ENST00000583080 RPUSD1Q9UJJ7 312 aaKnown RBP13.29□□□□□ -0.28
SREBF1-221ENST00000583080 ENPP4Q9Y6X5 453 aa13.29□□□□□ -0.28
SREBF1-221ENST00000583080 TRBV4-1A0A0J9YWV2 114 aa13.28□□□□□ -0.28
SREBF1-221ENST00000583080 hCG_1807616A0A1W2PRN6 198 aa13.28□□□□□ -0.28
SREBF1-221ENST00000583080 UNC119BA6NIH7 251 aa13.28□□□□□ -0.28
SREBF1-221ENST00000583080 A6NLC8 198 aa13.28□□□□□ -0.28
SREBF1-221ENST00000583080 M0R135 149 aa13.28□□□□□ -0.28
SREBF1-221ENST00000583080 TSPAN9O75954 239 aa13.28□□□□□ -0.28
SREBF1-221ENST00000583080 H1F0P07305 194 aaKnown RBP13.28□□□□□ -0.28
SREBF1-221ENST00000583080 LIPEQ05469 1076 aa13.28□□□□□ -0.28
SREBF1-221ENST00000583080 ECH1Q13011 328 aa13.28□□□□□ -0.28
SREBF1-221ENST00000583080 MAPRE2Q15555 327 aa13.28□□□□□ -0.28
SREBF1-221ENST00000583080 CDONQ4KMG0 1287 aa13.28□□□□□ -0.28
SREBF1-221ENST00000583080 Q6ZPA2 131 aa13.28□□□□□ -0.28
SREBF1-221ENST00000583080 SLC15A3Q8IY34 581 aa13.28□□□□□ -0.28
SREBF1-221ENST00000583080 ZNF799Q96GE5 643 aa13.28□□□□□ -0.28
SREBF1-221ENST00000583080 SLC22A4Q9H015 551 aa13.28□□□□□ -0.28
SREBF1-221ENST00000583080 TRIM36Q9NQ86 728 aa13.28□□□□□ -0.28
SREBF1-221ENST00000583080 RPRD1BQ9NQG5 326 aaKnown RBP13.28□□□□□ -0.28
SREBF1-221ENST00000583080 SIRT7Q9NRC8 400 aa13.28□□□□□ -0.28
SREBF1-221ENST00000583080 MRPL22Q9NWU5 206 aaKnown RBP13.28□□□□□ -0.28
SREBF1-221ENST00000583080 ONECUT1Q9UBC0 465 aa13.28□□□□□ -0.28
SREBF1-221ENST00000583080 DNAJB11Q9UBS4 358 aa13.28□□□□□ -0.28
SREBF1-221ENST00000583080 CYB5R1Q9UHQ9 305 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms