RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 STK11Q15831 433 aa8.16□□□□□ -1.1
SS18-220ENST00000582092 ZNF79Q15937 498 aa8.16□□□□□ -1.1
SS18-220ENST00000582092 BAK1Q16611 211 aa8.16□□□□□ -1.1
SS18-220ENST00000582092 TMEM69Q5SWH9 247 aa8.16□□□□□ -1.1
SS18-220ENST00000582092 LINGO2Q7L985 606 aa8.16□□□□□ -1.1
SS18-220ENST00000582092 ALPK2Q86TB3 2170 aa8.16□□□□□ -1.1
SS18-220ENST00000582092 NR2C2APQ86WQ0 139 aa8.16□□□□□ -1.1
SS18-220ENST00000582092 DTX3Q8N9I9 347 aa8.16□□□□□ -1.1
SS18-220ENST00000582092 OR8B12Q8NGG6 310 aa8.16□□□□□ -1.1
SS18-220ENST00000582092 OR52H1Q8NGJ2 320 aa8.16□□□□□ -1.1
SS18-220ENST00000582092 OR5H6Q8NGV6 325 aa8.16□□□□□ -1.1
SS18-220ENST00000582092 OR1F12Q8NHA8 337 aa8.16□□□□□ -1.1
SS18-220ENST00000582092 PRR7Q8TB68 274 aa8.16□□□□□ -1.1
SS18-220ENST00000582092 FCAMRQ8WWV6 532 aa8.16□□□□□ -1.1
SS18-220ENST00000582092 RNF166Q96A37 237 aaPredicted RBP8.16□□□□□ -1.1
SS18-220ENST00000582092 PPP1R14BQ96C90 147 aa8.16□□□□□ -1.1
SS18-220ENST00000582092 ZNF799Q96GE5 643 aa8.16□□□□□ -1.1
SS18-220ENST00000582092 WDYHV1Q96HA8 205 aa8.16□□□□□ -1.1
SS18-220ENST00000582092 GPER1Q99527 375 aa8.16□□□□□ -1.1
SS18-220ENST00000582092 THAP7Q9BT49 309 aaPredicted RBP8.16□□□□□ -1.1
SS18-220ENST00000582092 GPR84Q9NQS5 396 aa8.16□□□□□ -1.1
SS18-220ENST00000582092 GLRX2Q9NS18 164 aa8.16□□□□□ -1.1
SS18-220ENST00000582092 DIDO1Q9BTC0 2240 aaKnown RBP8.15□□□□□ -1.1
SS18-220ENST00000582092 A0A0B4J203 849 aa8.15□□□□□ -1.1
SS18-220ENST00000582092 A0A0G2JMP0 313 aa8.15□□□□□ -1.1
SS18-220ENST00000582092 A0A0X1KG70 313 aa8.15□□□□□ -1.1
SS18-220ENST00000582092 LOC100289279A0A1B0GTE1 492 aa8.15□□□□□ -1.1
SS18-220ENST00000582092 A0A1B0GVC2 190 aa8.15□□□□□ -1.1
SS18-220ENST00000582092 FAM240BA0A1B0GVZ2 78 aa8.15□□□□□ -1.1
SS18-220ENST00000582092 METTL21EPA6NDL7 271 aa8.15□□□□□ -1.1
SS18-220ENST00000582092 OR6C6A6NF89 314 aa8.15□□□□□ -1.1
SS18-220ENST00000582092 A6NIN4 97 aa8.15□□□□□ -1.1
SS18-220ENST00000582092 SLC17A2O00624 439 aa8.15□□□□□ -1.1
SS18-220ENST00000582092 WNT11O96014 354 aa8.15□□□□□ -1.1
SS18-220ENST00000582092 IGHV3-9P01782 118 aa8.15□□□□□ -1.1
SS18-220ENST00000582092 TTRP02766 147 aa8.15□□□□□ -1.1
SS18-220ENST00000582092 LCATP04180 440 aa8.15□□□□□ -1.1
SS18-220ENST00000582092 HCKP08631 526 aa8.15□□□□□ -1.1
SS18-220ENST00000582092 CSF3P09919 207 aa8.15□□□□□ -1.1
SS18-220ENST00000582092 SLC2A1P11166 492 aa8.15□□□□□ -1.1
SS18-220ENST00000582092 CD79AP11912 226 aa8.15□□□□□ -1.1
SS18-220ENST00000582092 EDN3P14138 238 aa8.15□□□□□ -1.1
SS18-220ENST00000582092 ARSBP15848 533 aa8.15□□□□□ -1.1
SS18-220ENST00000582092 CTSSP25774 331 aa8.15□□□□□ -1.1
SS18-220ENST00000582092 ARR3P36575 388 aa8.15□□□□□ -1.1
SS18-220ENST00000582092 HTR5AP47898 357 aa8.15□□□□□ -1.1
SS18-220ENST00000582092 BCAP31P51572 246 aa8.15□□□□□ -1.1
SS18-220ENST00000582092 PER3P56645 1201 aa8.15□□□□□ -1.1
SS18-220ENST00000582092 CLDN12P56749 244 aa8.15□□□□□ -1.1
SS18-220ENST00000582092 ARF1P84077 181 aaKnown RBP8.15□□□□□ -1.1
SS18-220ENST00000582092 PMP22Q01453 160 aa8.15□□□□□ -1.1
SS18-220ENST00000582092 RBPJQ06330 500 aa8.15□□□□□ -1.1
SS18-220ENST00000582092 FAPQ12884 760 aa8.15□□□□□ -1.1
SS18-220ENST00000582092 ASAH1Q13510 395 aa8.15□□□□□ -1.1
SS18-220ENST00000582092 RIN1Q13671 783 aa8.15□□□□□ -1.1
SS18-220ENST00000582092 FAM189A2Q15884 450 aa8.15□□□□□ -1.1
SS18-220ENST00000582092 C3AR1Q16581 482 aa8.15□□□□□ -1.1
SS18-220ENST00000582092 CCDC92Q53HC0 331 aaPredicted RBP8.15□□□□□ -1.1
SS18-220ENST00000582092 TSPO2Q5TGU0 170 aa8.15□□□□□ -1.1
SS18-220ENST00000582092 DRAM2Q6UX65 266 aa8.15□□□□□ -1.1
SS18-220ENST00000582092 KRT74Q7RTS7 529 aa8.15□□□□□ -1.1
SS18-220ENST00000582092 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.15□□□□□ -1.1
SS18-220ENST00000582092 DPPA2Q7Z7J5 298 aa8.15□□□□□ -1.1
SS18-220ENST00000582092 CMTM4Q8IZR5 234 aa8.15□□□□□ -1.1
SS18-220ENST00000582092 TOMM5Q8N4H5 51 aa8.15□□□□□ -1.1
SS18-220ENST00000582092 PNLDC1Q8NA58 520 aaKnown RBP8.15□□□□□ -1.1
SS18-220ENST00000582092 ST6GALNAC3Q8NDV1 305 aa8.15□□□□□ -1.1
SS18-220ENST00000582092 DNAAF1Q8NEP3 725 aa8.15□□□□□ -1.1
SS18-220ENST00000582092 OR1M1Q8NGA1 313 aa8.15□□□□□ -1.1
SS18-220ENST00000582092 OR4M2Q8NGB6 313 aa8.15□□□□□ -1.1
SS18-220ENST00000582092 OR6M1Q8NGM8 313 aa8.15□□□□□ -1.1
SS18-220ENST00000582092 OR10S1Q8NGN2 331 aa8.15□□□□□ -1.1
SS18-220ENST00000582092 NANOS1Q8WY41 292 aaKnown RBP8.15□□□□□ -1.1
SS18-220ENST00000582092 NABP1Q96AH0 204 aa8.15□□□□□ -1.1
SS18-220ENST00000582092 FAM3DQ96BQ1 224 aa8.15□□□□□ -1.1
SS18-220ENST00000582092 FBXO17Q96EF6 278 aa8.15□□□□□ -1.1
SS18-220ENST00000582092 CPNE2Q96FN4 548 aaPredicted RBP8.15□□□□□ -1.1
SS18-220ENST00000582092 TRIB1Q96RU8 372 aa8.15□□□□□ -1.1
SS18-220ENST00000582092 S100A13Q99584 98 aa8.15□□□□□ -1.1
SS18-220ENST00000582092 PPP1R3EQ9H7J1 279 aa8.15□□□□□ -1.1
SS18-220ENST00000582092 ZDHHC11Q9H8X9 412 aa8.15□□□□□ -1.1
SS18-220ENST00000582092 BCO1Q9HAY6 547 aa8.15□□□□□ -1.1
SS18-220ENST00000582092 GP6Q9HCN6 339 aa8.15□□□□□ -1.1
SS18-220ENST00000582092 TMEM138Q9NPI0 162 aa8.15□□□□□ -1.1
SS18-220ENST00000582092 DDX28Q9NUL7 540 aaKnown RBP8.15□□□□□ -1.1
SS18-220ENST00000582092 CACNA1CQ13936 2221 aa8.15□□□□□ -1.1
SS18-220ENST00000582092 HIVEP3Q5T1R4 2406 aa8.14□□□□□ -1.11
SS18-220ENST00000582092 MYO7BQ6PIF6 2116 aa8.14□□□□□ -1.11
SS18-220ENST00000582092 NCKAP5O14513 1909 aa8.14□□□□□ -1.11
SS18-220ENST00000582092 A0A0U1RQV5 110 aa8.14□□□□□ -1.11
SS18-220ENST00000582092 AQP7O14520 342 aa8.14□□□□□ -1.11
SS18-220ENST00000582092 EEF1E1O43324 174 aaKnown RBP8.14□□□□□ -1.11
SS18-220ENST00000582092 ECDO95905 644 aaPredicted RBP8.14□□□□□ -1.11
SS18-220ENST00000582092 HNRNPCP07910 306 aaKnown RBP eCLIP8.14□□□□□ -1.11
SS18-220ENST00000582092 ZNF32P17041 273 aa8.14□□□□□ -1.11
SS18-220ENST00000582092 MNDAP41218 407 aa8.14□□□□□ -1.11
SS18-220ENST00000582092 MAP2K3P46734 347 aa8.14□□□□□ -1.11
SS18-220ENST00000582092 POU3F4P49335 361 aa8.14□□□□□ -1.11
SS18-220ENST00000582092 CASP6P55212 293 aa8.14□□□□□ -1.11
SS18-220ENST00000582092 HIST1H3AP68431 136 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms