RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 ZFP1Q6P2D0 407 aa2.7□□□□□ -1.98
SMCHD1-205ENST00000581383 ZNF880Q6PDB4 577 aa2.7□□□□□ -1.98
SMCHD1-205ENST00000581383 SHISA6Q6ZSJ9 500 aa2.7□□□□□ -1.98
SMCHD1-205ENST00000581383 OTUD6AQ7L8S5 288 aa2.7□□□□□ -1.98
SMCHD1-205ENST00000581383 OR5AR1Q8NGP9 310 aa2.7□□□□□ -1.98
SMCHD1-205ENST00000581383 OR52P1PQ8NH57 321 aa2.7□□□□□ -1.98
SMCHD1-205ENST00000581383 CIRBP-AS1Q8TBR5 109 aa2.7□□□□□ -1.98
SMCHD1-205ENST00000581383 ESR2Q92731 530 aa2.7□□□□□ -1.98
SMCHD1-205ENST00000581383 RAB1CQ92928 201 aa2.7□□□□□ -1.98
SMCHD1-205ENST00000581383 APH1AQ96BI3 265 aa2.7□□□□□ -1.98
SMCHD1-205ENST00000581383 C9orf72Q96LT7 481 aa2.7□□□□□ -1.98
SMCHD1-205ENST00000581383 OPALINQ96PE5 141 aa2.7□□□□□ -1.98
SMCHD1-205ENST00000581383 RBBP8Q99708 897 aa2.7□□□□□ -1.98
SMCHD1-205ENST00000581383 RSPO3Q9BXY4 272 aaPredicted RBP2.7□□□□□ -1.98
SMCHD1-205ENST00000581383 CLSTN2Q9H4D0 955 aa2.7□□□□□ -1.98
SMCHD1-205ENST00000581383 ZC4H2Q9NQZ6 224 aa2.7□□□□□ -1.98
SMCHD1-205ENST00000581383 PSME2Q9UL46 239 aa2.7□□□□□ -1.98
SMCHD1-205ENST00000581383 YARS2Q9Y2Z4 477 aaKnown RBP2.7□□□□□ -1.98
SMCHD1-205ENST00000581383 PLA2R1Q13018 1463 aa2.7□□□□□ -1.98
SMCHD1-205ENST00000581383 PTPRTO14522 1441 aa2.69□□□□□ -1.98
SMCHD1-205ENST00000581383 KIF26AQ9ULI4 1882 aaPredicted RBP2.69□□□□□ -1.98
SMCHD1-205ENST00000581383 CCDC180Q9P1Z9 1646 aa2.69□□□□□ -1.98
SMCHD1-205ENST00000581383 A0A1B0GTQ1 180 aa2.69□□□□□ -1.98
SMCHD1-205ENST00000581383 COLCA2A8K830 154 aa2.69□□□□□ -1.98
SMCHD1-205ENST00000581383 PDZK1P1A8MUH7 402 aa2.69□□□□□ -1.98
SMCHD1-205ENST00000581383 KRBOX1C9JBD0 128 aa2.69□□□□□ -1.98
SMCHD1-205ENST00000581383 NDUFC2-KCTD14E9PQ53 114 aa2.69□□□□□ -1.98
SMCHD1-205ENST00000581383 H0YIV9 168 aa2.69□□□□□ -1.98
SMCHD1-205ENST00000581383 H0YJW9 148 aa2.69□□□□□ -1.98
SMCHD1-205ENST00000581383 ZBTB5O15062 677 aa2.69□□□□□ -1.98
SMCHD1-205ENST00000581383 SIVA1O15304 175 aa2.69□□□□□ -1.98
SMCHD1-205ENST00000581383 CHST10O43529 356 aa2.69□□□□□ -1.98
SMCHD1-205ENST00000581383 TDP2O95551 362 aa2.69□□□□□ -1.98
SMCHD1-205ENST00000581383 OXTP01178 125 aa2.69□□□□□ -1.98
SMCHD1-205ENST00000581383 ZNF688P0C7X2 276 aa2.69□□□□□ -1.98
SMCHD1-205ENST00000581383 RALBP11234 206 aa2.69□□□□□ -1.98
SMCHD1-205ENST00000581383 CCT6AP40227 531 aaKnown RBP2.69□□□□□ -1.98
SMCHD1-205ENST00000581383 CXCL12P48061 93 aa2.69□□□□□ -1.98
SMCHD1-205ENST00000581383 FABP6P51161 128 aa2.69□□□□□ -1.98
SMCHD1-205ENST00000581383 GFERP55789 205 aa2.69□□□□□ -1.98
SMCHD1-205ENST00000581383 TAS2R31P59538 309 aa2.69□□□□□ -1.98
SMCHD1-205ENST00000581383 CRADDP78560 199 aa2.69□□□□□ -1.98
SMCHD1-205ENST00000581383 COX19Q49B96 90 aa2.69□□□□□ -1.98
SMCHD1-205ENST00000581383 APRG1Q8IVJ8 170 aa2.69□□□□□ -1.98
SMCHD1-205ENST00000581383 TMEM256Q8N2U0 113 aa2.69□□□□□ -1.98
SMCHD1-205ENST00000581383 LRRC75AQ8NAA5 344 aa2.69□□□□□ -1.98
SMCHD1-205ENST00000581383 NECAP1Q8NC96 275 aa2.69□□□□□ -1.98
SMCHD1-205ENST00000581383 OR10G6Q8NH81 332 aa2.69□□□□□ -1.98
SMCHD1-205ENST00000581383 LILRB4Q8NHJ6 448 aa2.69□□□□□ -1.98
SMCHD1-205ENST00000581383 LINC01560Q8TB33 94 aa2.69□□□□□ -1.98
SMCHD1-205ENST00000581383 GPX8Q8TED1 209 aa2.69□□□□□ -1.98
SMCHD1-205ENST00000581383 GLYATL2Q8WU03 294 aa2.69□□□□□ -1.98
SMCHD1-205ENST00000581383 HAUS1Q96CS2 278 aa2.69□□□□□ -1.98
SMCHD1-205ENST00000581383 SGTBQ96EQ0 304 aa2.69□□□□□ -1.98
SMCHD1-205ENST00000581383 BTN2A3PQ96KV6 586 aa2.69□□□□□ -1.98
SMCHD1-205ENST00000581383 LINC00477Q96M19 166 aa2.69□□□□□ -1.98
SMCHD1-205ENST00000581383 RNF5Q99942 180 aa2.69□□□□□ -1.98
SMCHD1-205ENST00000581383 TMEM243Q9BU79 118 aa2.69□□□□□ -1.98
SMCHD1-205ENST00000581383 GGTLC1Q9BX51 225 aa2.69□□□□□ -1.98
SMCHD1-205ENST00000581383 SAMD10Q9BYL1 202 aa2.69□□□□□ -1.98
SMCHD1-205ENST00000581383 NCOR1P1Q9H4R4 102 aa2.69□□□□□ -1.98
SMCHD1-205ENST00000581383 C8orf33Q9H7E9 229 aaPredicted RBP2.69□□□□□ -1.98
SMCHD1-205ENST00000581383 UBIAD1Q9Y5Z9 338 aa2.69□□□□□ -1.98
SMCHD1-205ENST00000581383 TUBGCP6Q96RT7 1819 aa2.68□□□□□ -1.98
SMCHD1-205ENST00000581383 ANKRD65E5RJM6 399 aa2.68□□□□□ -1.98
SMCHD1-205ENST00000581383 CASC3O15234 703 aaKnown RBP2.68□□□□□ -1.98
SMCHD1-205ENST00000581383 XRCC2O43543 280 aa2.68□□□□□ -1.98
SMCHD1-205ENST00000581383 SCELO95171 688 aa2.68□□□□□ -1.98
SMCHD1-205ENST00000581383 MPZL1O95297 269 aa2.68□□□□□ -1.98
SMCHD1-205ENST00000581383 CCNE2O96020 404 aa2.68□□□□□ -1.98
SMCHD1-205ENST00000581383 TUBG1P23258 451 aa2.68□□□□□ -1.98
SMCHD1-205ENST00000581383 PFN2P35080 140 aa2.68□□□□□ -1.98
SMCHD1-205ENST00000581383 TALDO1P37837 337 aa2.68□□□□□ -1.98
SMCHD1-205ENST00000581383 GPR1P46091 355 aa2.68□□□□□ -1.98
SMCHD1-205ENST00000581383 CCNG1P51959 295 aa2.68□□□□□ -1.98
SMCHD1-205ENST00000581383 CLDN8P56748 225 aa2.68□□□□□ -1.98
SMCHD1-205ENST00000581383 RAB11AP62491 216 aa2.68□□□□□ -1.98
SMCHD1-205ENST00000581383 ZNF33AQ06730 810 aa2.68□□□□□ -1.98
SMCHD1-205ENST00000581383 CDC20Q12834 499 aa2.68□□□□□ -1.98
SMCHD1-205ENST00000581383 RAB11BQ15907 218 aa2.68□□□□□ -1.98
SMCHD1-205ENST00000581383 RPEL1Q2QD12 228 aa2.68□□□□□ -1.98
SMCHD1-205ENST00000581383 ZNF829Q3KNS6 432 aaPredicted RBP2.68□□□□□ -1.98
SMCHD1-205ENST00000581383 PIP5KL1Q5T9C9 394 aa2.68□□□□□ -1.98
SMCHD1-205ENST00000581383 BHLHA15Q7RTS1 189 aaPredicted RBP2.68□□□□□ -1.98
SMCHD1-205ENST00000581383 FAM122BQ7Z309 247 aa2.68□□□□□ -1.98
SMCHD1-205ENST00000581383 ZNF561Q8N587 486 aa2.68□□□□□ -1.98
SMCHD1-205ENST00000581383 INO80EQ8NBZ0 244 aaPredicted RBP2.68□□□□□ -1.98
SMCHD1-205ENST00000581383 RNF157Q96PX1 679 aa2.68□□□□□ -1.98
SMCHD1-205ENST00000581383 RRAGDQ9NQL2 400 aaPredicted RBP2.68□□□□□ -1.98
SMCHD1-205ENST00000581383 TUBG2Q9NRH3 451 aa2.68□□□□□ -1.98
SMCHD1-205ENST00000581383 C8orf17Q9NRJ1 99 aa2.68□□□□□ -1.98
SMCHD1-205ENST00000581383 RGS18Q9NS28 235 aa2.68□□□□□ -1.98
SMCHD1-205ENST00000581383 MCUBQ9NWR8 336 aa2.68□□□□□ -1.98
SMCHD1-205ENST00000581383 GGA2Q9UJY4 613 aa2.68□□□□□ -1.98
SMCHD1-205ENST00000581383 DDX19BQ9UMR2 479 aa2.68□□□□□ -1.98
SMCHD1-205ENST00000581383 ANKRD12Q6UB98 2062 aa2.67□□□□□ -1.98
SMCHD1-205ENST00000581383 TSPOAP1O95153 1857 aa2.67□□□□□ -1.98
SMCHD1-205ENST00000581383 PLEKHG2Q9H7P9 1386 aa2.67□□□□□ -1.98
SMCHD1-205ENST00000581383 ERI3O43414 337 aaKnown RBP2.67□□□□□ -1.98
SMCHD1-205ENST00000581383 MYL9P24844 172 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms