RNA–Protein interactions for RNA: ENST00000580991.1

IFT20-211, Transcript of intraflagellar transport 20, humanhuman

TSL 4

Gene IFT20, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-211ENST00000580991 VPREB3Q9UKI3 123 aa12.14□□□□□ -0.47
IFT20-211ENST00000580991 STARD10Q9Y365 291 aa12.14□□□□□ -0.47
IFT20-211ENST00000580991 FAM96BQ9Y3D0 163 aa12.14□□□□□ -0.47
IFT20-211ENST00000580991 CPSF4LA6NMK7 179 aaKnown RBP12.13□□□□□ -0.47
IFT20-211ENST00000580991 C12orf71A8MTZ7 269 aa12.13□□□□□ -0.47
IFT20-211ENST00000580991 M0R3H8 397 aa12.13□□□□□ -0.47
IFT20-211ENST00000580991 EI24O14681 340 aa12.13□□□□□ -0.47
IFT20-211ENST00000580991 LYPD3O95274 346 aa12.13□□□□□ -0.47
IFT20-211ENST00000580991 THY1P04216 161 aa12.13□□□□□ -0.47
IFT20-211ENST00000580991 IRF2P14316 349 aa12.13□□□□□ -0.47
IFT20-211ENST00000580991 RAC2P15153 192 aa12.13□□□□□ -0.47
IFT20-211ENST00000580991 HOXB9P17482 250 aaPredicted RBP12.13□□□□□ -0.47
IFT20-211ENST00000580991 PPIBP23284 216 aaKnown RBP12.13□□□□□ -0.47
IFT20-211ENST00000580991 AQP1P29972 269 aa12.13□□□□□ -0.47
IFT20-211ENST00000580991 CAPGP40121 348 aa12.13□□□□□ -0.47
IFT20-211ENST00000580991 SCARB2Q14108 478 aa12.13□□□□□ -0.47
IFT20-211ENST00000580991 KCTD21Q4G0X4 260 aa12.13□□□□□ -0.47
IFT20-211ENST00000580991 SYT9Q86SS6 491 aa12.13□□□□□ -0.47
IFT20-211ENST00000580991 OR5AS1Q8N127 324 aa12.13□□□□□ -0.47
IFT20-211ENST00000580991 DHRSXQ8N5I4 330 aa12.13□□□□□ -0.47
IFT20-211ENST00000580991 MPP4Q96JB8 637 aa12.13□□□□□ -0.47
IFT20-211ENST00000580991 RDH12Q96NR8 316 aa12.13□□□□□ -0.47
IFT20-211ENST00000580991 ERVK-18Q9QC07 812 aa12.13□□□□□ -0.47
IFT20-211ENST00000580991 DNAJB9Q9UBS3 223 aa12.13□□□□□ -0.47
IFT20-211ENST00000580991 SLC7A7Q9UM01 511 aa12.13□□□□□ -0.47
IFT20-211ENST00000580991 CORO2BQ9UQ03 480 aa12.13□□□□□ -0.47
IFT20-211ENST00000580991 V9GYQ6 96 aa12.13□□□□□ -0.47
IFT20-211ENST00000580991 TRAPPC13A5PLN9 417 aa12.12□□□□□ -0.47
IFT20-211ENST00000580991 NPIPB13A6NJU9 1138 aa12.12□□□□□ -0.47
IFT20-211ENST00000580991 NPIPB4C9JG80 1138 aa12.12□□□□□ -0.47
IFT20-211ENST00000580991 H0YAE9 185 aa12.12□□□□□ -0.47
IFT20-211ENST00000580991 DBPQ10586 325 aaPredicted RBP12.12□□□□□ -0.47
IFT20-211ENST00000580991 COX10Q12887 443 aa12.12□□□□□ -0.47
IFT20-211ENST00000580991 GK3PQ14409 553 aa12.12□□□□□ -0.47
IFT20-211ENST00000580991 SLC36A3Q495N2 470 aa12.12□□□□□ -0.47
IFT20-211ENST00000580991 SLC35E4Q6ICL7 350 aa12.12□□□□□ -0.47
IFT20-211ENST00000580991 C11orf87Q6NUJ2 197 aa12.12□□□□□ -0.47
IFT20-211ENST00000580991 C10orf111Q8N326 155 aa12.12□□□□□ -0.47
IFT20-211ENST00000580991 SMYD1Q8NB12 490 aa12.12□□□□□ -0.47
IFT20-211ENST00000580991 TSPAN14Q8NG11 270 aa12.12□□□□□ -0.47
IFT20-211ENST00000580991 OR8G5Q8NG78 346 aa12.12□□□□□ -0.47
IFT20-211ENST00000580991 OR6T1Q8NGN1 323 aa12.12□□□□□ -0.47
IFT20-211ENST00000580991 FNDC8Q8TC99 324 aa12.12□□□□□ -0.47
IFT20-211ENST00000580991 RBP7Q96R05 134 aa12.12□□□□□ -0.47
IFT20-211ENST00000580991 WACQ9BTA9 647 aa12.12□□□□□ -0.47
IFT20-211ENST00000580991 SIRPDQ9H106 197 aa12.12□□□□□ -0.47
IFT20-211ENST00000580991 IKZF5Q9H5V7 419 aa12.12□□□□□ -0.47
IFT20-211ENST00000580991 TMEM38AQ9H6F2 299 aa12.12□□□□□ -0.47
IFT20-211ENST00000580991 MEPEQ9NQ76 525 aaPredicted RBP12.12□□□□□ -0.47
IFT20-211ENST00000580991 CAB39Q9Y376 341 aaPredicted RBP12.12□□□□□ -0.47
IFT20-211ENST00000580991 DNAH3Q8TD57 4116 aa12.11□□□□□ -0.47
IFT20-211ENST00000580991 IGHV3-64DA0A0J9YX35 117 aa12.11□□□□□ -0.47
IFT20-211ENST00000580991 ANKRD61A6NGH8 418 aa12.11□□□□□ -0.47
IFT20-211ENST00000580991 RNASEK-C17orf49H0YIS7 233 aa12.11□□□□□ -0.47
IFT20-211ENST00000580991 FBP1P09467 338 aa12.11□□□□□ -0.47
IFT20-211ENST00000580991 FUT1P19526 365 aa12.11□□□□□ -0.47
IFT20-211ENST00000580991 MSR1P21757 451 aa12.11□□□□□ -0.47
IFT20-211ENST00000580991 GABRA5P31644 462 aa12.11□□□□□ -0.47
IFT20-211ENST00000580991 AQP2P41181 271 aa12.11□□□□□ -0.47
IFT20-211ENST00000580991 HTR5AP47898 357 aa12.11□□□□□ -0.47
IFT20-211ENST00000580991 GZMMP51124 257 aa12.11□□□□□ -0.47
IFT20-211ENST00000580991 ALDH3A2P51648 485 aa12.11□□□□□ -0.47
IFT20-211ENST00000580991 ENDOGQ14249 297 aaKnown RBP12.11□□□□□ -0.47
IFT20-211ENST00000580991 NPTX1Q15818 432 aa12.11□□□□□ -0.47
IFT20-211ENST00000580991 CNPY1Q3B7I2 92 aa12.11□□□□□ -0.47
IFT20-211ENST00000580991 C11orf88Q6PI97 169 aa12.11□□□□□ -0.47
IFT20-211ENST00000580991 FOXL2NBQ6ZUU3 175 aa12.11□□□□□ -0.47
IFT20-211ENST00000580991 SATL1Q86VE3 508 aa12.11□□□□□ -0.47
IFT20-211ENST00000580991 SLC30A8Q8IWU4 369 aa12.11□□□□□ -0.47
IFT20-211ENST00000580991 PIP4P2Q8N4L2 257 aa12.11□□□□□ -0.47
IFT20-211ENST00000580991 CYGBQ8WWM9 190 aa12.11□□□□□ -0.47
IFT20-211ENST00000580991 CFHR4Q92496 578 aa12.11□□□□□ -0.47
IFT20-211ENST00000580991 PHF21AQ96BD5 680 aa12.11□□□□□ -0.47
IFT20-211ENST00000580991 ZNF582Q96NG8 517 aaPredicted RBP12.11□□□□□ -0.47
IFT20-211ENST00000580991 ALG12Q9BV10 488 aa12.11□□□□□ -0.47
IFT20-211ENST00000580991 YTHDF1Q9BYJ9 559 aaKnown RBP12.11□□□□□ -0.47
IFT20-211ENST00000580991 DCAF13Q9NV06 445 aaKnown RBP12.11□□□□□ -0.47
IFT20-211ENST00000580991 ZNRD1Q9P1U0 126 aa12.11□□□□□ -0.47
IFT20-211ENST00000580991 RPS6KA6Q9UK32 745 aa12.11□□□□□ -0.47
IFT20-211ENST00000580991 SAMD4AQ9UPU9 718 aaKnown RBP12.11□□□□□ -0.47
IFT20-211ENST00000580991 ANGPT4Q9Y264 503 aa12.11□□□□□ -0.47
IFT20-211ENST00000580991 COMMD3-BMI1R4GMX3 469 aa12.11□□□□□ -0.47
IFT20-211ENST00000580991 A0A087WXM4 84 aa12.1□□□□□ -0.47
IFT20-211ENST00000580991 F5H5P2 479 aa12.1□□□□□ -0.47
IFT20-211ENST00000580991 J3QW42 95 aa12.1□□□□□ -0.47
IFT20-211ENST00000580991 DLGAP1O14490 977 aa12.1□□□□□ -0.47
IFT20-211ENST00000580991 GNGT2O14610 69 aa12.1□□□□□ -0.47
IFT20-211ENST00000580991 MLNRO43193 412 aa12.1□□□□□ -0.47
IFT20-211ENST00000580991 DOK2O60496 412 aa12.1□□□□□ -0.47
IFT20-211ENST00000580991 MT-ND1P03886 318 aa12.1□□□□□ -0.47
IFT20-211ENST00000580991 TFAP2AP05549 437 aa12.1□□□□□ -0.47
IFT20-211ENST00000580991 ATP6V1B1P15313 513 aa12.1□□□□□ -0.47
IFT20-211ENST00000580991 PMELP40967 661 aa12.1□□□□□ -0.47
IFT20-211ENST00000580991 GATA4P43694 442 aa12.1□□□□□ -0.47
IFT20-211ENST00000580991 SCRN3Q0VDG4 424 aa12.1□□□□□ -0.47
IFT20-211ENST00000580991 KCNJ8Q15842 424 aa12.1□□□□□ -0.47
IFT20-211ENST00000580991 DUSP7Q16829 419 aa12.1□□□□□ -0.47
IFT20-211ENST00000580991 OR2T2Q6IF00 324 aa12.1□□□□□ -0.47
IFT20-211ENST00000580991 C1orf94Q6P1W5 598 aa12.1□□□□□ -0.47
IFT20-211ENST00000580991 FBXW12Q6X9E4 464 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms