RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 H0YC42 278 aa9.78□□□□□ -0.84
SKA2-204ENST00000578519 NKX2-8O15522 239 aa9.78□□□□□ -0.84
SKA2-204ENST00000578519 XRCC2O43543 280 aa9.78□□□□□ -0.84
SKA2-204ENST00000578519 PRAF2O60831 178 aa9.78□□□□□ -0.84
SKA2-204ENST00000578519 CTAG2O75638 210 aa9.78□□□□□ -0.84
SKA2-204ENST00000578519 DHRS3O75911 302 aa9.78□□□□□ -0.84
SKA2-204ENST00000578519 WNT11O96014 354 aa9.78□□□□□ -0.84
SKA2-204ENST00000578519 HCKP08631 526 aa9.78□□□□□ -0.84
SKA2-204ENST00000578519 ITGA5P08648 1049 aa9.78□□□□□ -0.84
SKA2-204ENST00000578519 COX5BP10606 129 aa9.78□□□□□ -0.84
SKA2-204ENST00000578519 OTX1P32242 354 aaPredicted RBP9.78□□□□□ -0.84
SKA2-204ENST00000578519 RCVRNP35243 200 aa9.78□□□□□ -0.84
SKA2-204ENST00000578519 ZNF93P35789 620 aaPredicted RBP9.78□□□□□ -0.84
SKA2-204ENST00000578519 ARR3P36575 388 aa9.78□□□□□ -0.84
SKA2-204ENST00000578519 EIF2S3P41091 472 aaKnown RBP9.78□□□□□ -0.84
SKA2-204ENST00000578519 PTH2RP49190 550 aa9.78□□□□□ -0.84
SKA2-204ENST00000578519 DGCR2P98153 550 aa9.78□□□□□ -0.84
SKA2-204ENST00000578519 PLP2Q04941 152 aa9.78□□□□□ -0.84
SKA2-204ENST00000578519 UTS2BQ765I0 119 aa9.78□□□□□ -0.84
SKA2-204ENST00000578519 BTN2A1Q7KYR7 527 aa9.78□□□□□ -0.84
SKA2-204ENST00000578519 P4HA3Q7Z4N8 544 aa9.78□□□□□ -0.84
SKA2-204ENST00000578519 SIAH3Q8IW03 269 aa9.78□□□□□ -0.84
SKA2-204ENST00000578519 UBE2J2Q8N2K1 259 aa9.78□□□□□ -0.84
SKA2-204ENST00000578519 DTX3Q8N9I9 347 aa9.78□□□□□ -0.84
SKA2-204ENST00000578519 KCNG3Q8TAE7 436 aa9.78□□□□□ -0.84
SKA2-204ENST00000578519 UBASH3BQ8TF42 649 aa9.78□□□□□ -0.84
SKA2-204ENST00000578519 NANOS1Q8WY41 292 aaKnown RBP9.78□□□□□ -0.84
SKA2-204ENST00000578519 SLC25A28Q96A46 364 aa9.78□□□□□ -0.84
SKA2-204ENST00000578519 ZNF775Q96BV0 537 aaPredicted RBP9.78□□□□□ -0.84
SKA2-204ENST00000578519 ZNF845Q96IR2 970 aaPredicted RBP9.78□□□□□ -0.84
SKA2-204ENST00000578519 FAM71F1Q96KD3 344 aaPredicted RBP9.78□□□□□ -0.84
SKA2-204ENST00000578519 TECTBQ96PL2 329 aa9.78□□□□□ -0.84
SKA2-204ENST00000578519 GPER1Q99527 375 aa9.78□□□□□ -0.84
SKA2-204ENST00000578519 URM1Q9BTM9 101 aaKnown RBP9.78□□□□□ -0.84
SKA2-204ENST00000578519 HES7Q9BYE0 225 aa9.78□□□□□ -0.84
SKA2-204ENST00000578519 PCDHB16Q9NRJ7 776 aa9.78□□□□□ -0.84
SKA2-204ENST00000578519 FAM86C1Q9NVL1 165 aa9.78□□□□□ -0.84
SKA2-204ENST00000578519 ING3Q9NXR8 418 aa9.78□□□□□ -0.84
SKA2-204ENST00000578519 V9GYS6 101 aa9.78□□□□□ -0.84
SKA2-204ENST00000578519 TMEM272A0A1B0GTI8 110 aa9.77□□□□□ -0.85
SKA2-204ENST00000578519 H7C417 338 aa9.77□□□□□ -0.85
SKA2-204ENST00000578519 TM4SF5O14894 197 aa9.77□□□□□ -0.85
SKA2-204ENST00000578519 TCRBP04435 133 aa9.77□□□□□ -0.85
SKA2-204ENST00000578519 H2AFB2P0C5Z0 115 aa9.77□□□□□ -0.85
SKA2-204ENST00000578519 SDHBP21912 280 aa9.77□□□□□ -0.85
SKA2-204ENST00000578519 PRKACBP22694 351 aa9.77□□□□□ -0.85
SKA2-204ENST00000578519 RFC3P40938 356 aa9.77□□□□□ -0.85
SKA2-204ENST00000578519 HTR5AP47898 357 aa9.77□□□□□ -0.85
SKA2-204ENST00000578519 RIPPLY1Q0D2K3 151 aa9.77□□□□□ -0.85
SKA2-204ENST00000578519 KLF9Q13886 244 aaPredicted RBP9.77□□□□□ -0.85
SKA2-204ENST00000578519 CNN3Q15417 329 aaKnown RBP9.77□□□□□ -0.85
SKA2-204ENST00000578519 PLA1AQ53H76 456 aa9.77□□□□□ -0.85
SKA2-204ENST00000578519 ZNF529Q6P280 563 aa9.77□□□□□ -0.85
SKA2-204ENST00000578519 Q6ZSR3 168 aa9.77□□□□□ -0.85
SKA2-204ENST00000578519 ZNF627Q7L945 461 aa9.77□□□□□ -0.85
SKA2-204ENST00000578519 PRSS45Q7RTY3 260 aa9.77□□□□□ -0.85
SKA2-204ENST00000578519 VASH2Q86V25 355 aa9.77□□□□□ -0.85
SKA2-204ENST00000578519 CCDC36Q8IYA8 594 aa9.77□□□□□ -0.85
SKA2-204ENST00000578519 ZNF101Q8IZC7 436 aa9.77□□□□□ -0.85
SKA2-204ENST00000578519 SEMA6DQ8NFY4 1073 aa9.77□□□□□ -0.85
SKA2-204ENST00000578519 OR13C9Q8NGT0 318 aa9.77□□□□□ -0.85
SKA2-204ENST00000578519 OR14K1Q8NGZ2 314 aa9.77□□□□□ -0.85
SKA2-204ENST00000578519 OR52I2Q8NH67 350 aa9.77□□□□□ -0.85
SKA2-204ENST00000578519 OR56B4Q8NH76 319 aa9.77□□□□□ -0.85
SKA2-204ENST00000578519 ABHD3Q8WU67 409 aa9.77□□□□□ -0.85
SKA2-204ENST00000578519 SARAFQ96BY9 339 aa9.77□□□□□ -0.85
SKA2-204ENST00000578519 FBXO17Q96EF6 278 aa9.77□□□□□ -0.85
SKA2-204ENST00000578519 ADAT3Q96EY9 351 aaPredicted RBP9.77□□□□□ -0.85
SKA2-204ENST00000578519 CST11Q9H112 138 aa9.77□□□□□ -0.85
SKA2-204ENST00000578519 DEFB127Q9H1M4 99 aa9.77□□□□□ -0.85
SKA2-204ENST00000578519 ZDHHC11Q9H8X9 412 aa9.77□□□□□ -0.85
SKA2-204ENST00000578519 CALHM2Q9HA72 323 aa9.77□□□□□ -0.85
SKA2-204ENST00000578519 MTFP1Q9UDX5 166 aa9.77□□□□□ -0.85
SKA2-204ENST00000578519 RBMX2Q9Y388 322 aaKnown RBP9.77□□□□□ -0.85
SKA2-204ENST00000578519 A0A087WV48 116 aa9.76□□□□□ -0.85
SKA2-204ENST00000578519 ANKRD20A5PA0PJZ0 165 aa9.76□□□□□ -0.85
SKA2-204ENST00000578519 SLC22A20A6NK97 555 aa9.76□□□□□ -0.85
SKA2-204ENST00000578519 SYNGR3O43761 229 aa9.76□□□□□ -0.85
SKA2-204ENST00000578519 IGLV3-1P01715 115 aa9.76□□□□□ -0.85
SKA2-204ENST00000578519 LCATP04180 440 aa9.76□□□□□ -0.85
SKA2-204ENST00000578519 FAM157BP0CG42 384 aa9.76□□□□□ -0.85
SKA2-204ENST00000578519 PRF1P14222 555 aa9.76□□□□□ -0.85
SKA2-204ENST00000578519 ZNF32P17041 273 aa9.76□□□□□ -0.85
SKA2-204ENST00000578519 TATDN3Q17R31 274 aa9.76□□□□□ -0.85
SKA2-204ENST00000578519 DEFB109BQ30KR1 87 aa9.76□□□□□ -0.85
SKA2-204ENST00000578519 GFOD2Q3B7J2 385 aa9.76□□□□□ -0.85
SKA2-204ENST00000578519 ZBTB37Q5TC79 503 aa9.76□□□□□ -0.85
SKA2-204ENST00000578519 TSPO2Q5TGU0 170 aa9.76□□□□□ -0.85
SKA2-204ENST00000578519 OLFML2AQ68BL7 652 aa9.76□□□□□ -0.85
SKA2-204ENST00000578519 AWAT2Q6E213 333 aa9.76□□□□□ -0.85
SKA2-204ENST00000578519 RTL6Q6ICC9 239 aa9.76□□□□□ -0.85
SKA2-204ENST00000578519 DNM1P46Q6ZS02 220 aa9.76□□□□□ -0.85
SKA2-204ENST00000578519 FGD2Q7Z6J4 655 aa9.76□□□□□ -0.85
SKA2-204ENST00000578519 ANGPTL5Q86XS5 388 aa9.76□□□□□ -0.85
SKA2-204ENST00000578519 TUSC5Q8IXB3 177 aa9.76□□□□□ -0.85
SKA2-204ENST00000578519 IZUMO1Q8IYV9 350 aa9.76□□□□□ -0.85
SKA2-204ENST00000578519 WDYHV1Q96HA8 205 aa9.76□□□□□ -0.85
SKA2-204ENST00000578519 OR2H1Q9GZK4 316 aa9.76□□□□□ -0.85
SKA2-204ENST00000578519 OPA3Q9H6K4 179 aa9.76□□□□□ -0.85
SKA2-204ENST00000578519 GPN1Q9HCN4 374 aaPredicted RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms